RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 SEMA3FQ13275 785 aa13.03□□□□□ -0.32
PCSK9-202ENST00000490692 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
PCSK9-202ENST00000490692 CCDC121Q6ZUS5 278 aa13.03□□□□□ -0.32
PCSK9-202ENST00000490692 CAPS2Q9BXY5 557 aa13.03□□□□□ -0.32
PCSK9-202ENST00000490692 YY1AP1Q9H869 796 aa13.03□□□□□ -0.32
PCSK9-202ENST00000490692 FAM169AQ9Y6X4 670 aa13.03□□□□□ -0.32
PCSK9-202ENST00000490692 ARHGEF28Q8N1W1 1705 aaKnown RBP13.03□□□□□ -0.32
PCSK9-202ENST00000490692 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
PCSK9-202ENST00000490692 LRCH2Q5VUJ6 765 aa13.03□□□□□ -0.32
PCSK9-202ENST00000490692 RRAGBQ5VZM2 374 aa13.03□□□□□ -0.32
PCSK9-202ENST00000490692 PRR36Q9H6K5 1346 aa13.03□□□□□ -0.32
PCSK9-202ENST00000490692 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.32
PCSK9-202ENST00000490692 CHGBP05060 677 aa13.02□□□□□ -0.32
PCSK9-202ENST00000490692 KRT9P35527 623 aa13.02□□□□□ -0.32
PCSK9-202ENST00000490692 VSTM4Q8IW00 320 aa13.02□□□□□ -0.32
PCSK9-202ENST00000490692 GRAMD1CQ8IYS0 662 aa13.02□□□□□ -0.32
PCSK9-202ENST00000490692 CCDC113Q9H0I3 377 aa13.02□□□□□ -0.32
PCSK9-202ENST00000490692 MED4Q9NPJ6 270 aa13.02□□□□□ -0.32
PCSK9-202ENST00000490692 TAF5LO75529 589 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 GRIPAP1Q4V328 841 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 GNL3LQ9NVN8 582 aaKnown RBP13.02□□□□□ -0.33
PCSK9-202ENST00000490692 DIP2BQ9P265 1576 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 TMEM131LA2VDJ0 1609 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 OPA1O60313 960 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.33
PCSK9-202ENST00000490692 IDEP14735 1019 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 TRIM21P19474 475 aaKnown RBP13.02□□□□□ -0.33
PCSK9-202ENST00000490692 LLPHQ9BRT6 129 aaKnown RBP13.02□□□□□ -0.33
PCSK9-202ENST00000490692 MYL10Q9BUA6 226 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 SAMSN1Q9NSI8 373 aaKnown RBP13.02□□□□□ -0.33
PCSK9-202ENST00000490692 MRFAP1Q9Y605 127 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
PCSK9-202ENST00000490692 ATL3Q6DD88 541 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 EGFL6Q8IUX8 553 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 N4BP2L2Q92802 583 aaPredicted RBP13.01□□□□□ -0.33
PCSK9-202ENST00000490692 EEF2KMTQ96G04 330 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 TANGO6Q9C0B7 1094 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 MYO6Q9UM54 1294 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 A0A087WZG4 1122 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 CUTAO60888 179 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 TIMM10P62072 90 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 UBXN1Q04323 297 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 CKAP4Q07065 602 aaKnown RBP13.01□□□□□ -0.33
PCSK9-202ENST00000490692 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 COL9A3Q14050 684 aaPredicted RBP13.01□□□□□ -0.33
PCSK9-202ENST00000490692 CEP85LQ5SZL2 805 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 BRAPQ7Z569 592 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
PCSK9-202ENST00000490692 LINC00301Q8NCQ3 95 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 CALR3Q96L12 384 aaKnown RBP13.01□□□□□ -0.33
PCSK9-202ENST00000490692 SARNPP82979 210 aaKnown RBP13.01□□□□□ -0.33
PCSK9-202ENST00000490692 ACTN3Q08043 901 aaPredicted RBP13.01□□□□□ -0.33
PCSK9-202ENST00000490692 CNGA4Q8IV77 575 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 FMR1NBQ8N0W7 255 aaPredicted RBP13.01□□□□□ -0.33
PCSK9-202ENST00000490692 AIDAQ96BJ3 306 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 SUCLG2Q96I99 432 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 PPANQ9NQ55 473 aaKnown RBP13.01□□□□□ -0.33
PCSK9-202ENST00000490692 TAB2Q9NYJ8 693 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 SUFUQ9UMX1 484 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 ROBO2Q9HCK4 1378 aa13.01□□□□□ -0.33
PCSK9-202ENST00000490692 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 CASP14P31944 242 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 PFKFB2O60825 505 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 ZRANB2O95218 330 aaKnown RBP eCLIP13□□□□□ -0.333e-6■■■■□ 21.9
PCSK9-202ENST00000490692 B4GALNT4Q76KP1 1039 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 CEP126Q9P2H0 1117 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 MYO3AQ8NEV4 1616 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
PCSK9-202ENST00000490692 KCNQ3O43525 872 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 XBP1P17861 261 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 BIRC2Q13490 618 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 AIFM3Q96NN9 605 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 SERTAD1Q9UHV2 236 aa13□□□□□ -0.33
PCSK9-202ENST00000490692 TTF2Q9UNY4 1162 aaKnown RBP13□□□□□ -0.33
PCSK9-202ENST00000490692 TMEM2Q9UHN6 1383 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 SATB1Q01826 763 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 CFAP58Q5T655 872 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 VPS37DQ86XT2 251 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 NCOA7Q8NI08 942 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 A0A1B0GUA9 196 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 E7EWF7 191 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 MYO1BO43795 1136 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 SRGAP2O75044 1071 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 ZPR1O75312 459 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 TUBBP07437 444 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 RBL2Q08999 1139 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 SMYD4Q8IYR2 804 aaPredicted RBP12.99□□□□□ -0.33
PCSK9-202ENST00000490692 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
PCSK9-202ENST00000490692 CCDC47Q96A33 483 aaKnown RBP12.99□□□□□ -0.33
PCSK9-202ENST00000490692 ODF2LQ9ULJ1 636 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 SLC12A7Q9Y666 1083 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 HGSO14964 777 aaPredicted RBP12.99□□□□□ -0.33
PCSK9-202ENST00000490692 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
PCSK9-202ENST00000490692 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 SSRP1Q08945 709 aaKnown RBP12.99□□□□□ -0.33
PCSK9-202ENST00000490692 IFT88Q13099 833 aa12.99□□□□□ -0.33
PCSK9-202ENST00000490692 POSTNQ15063 836 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms