RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 DDX58O95786 925 aaKnown RBP11.54□□□□□ -0.56
SRRM1-217ENST00000490543 MMP14P50281 582 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 NBPF12Q5TAG4 269 aaPredicted RBP11.54□□□□□ -0.56
SRRM1-217ENST00000490543 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
SRRM1-217ENST00000490543 ARMC5Q96C12 935 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 ERO1AQ96HE7 468 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 PRMT6Q96LA8 375 aaPredicted RBP11.54□□□□□ -0.56
SRRM1-217ENST00000490543 SPSB2Q99619 263 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 SLC6A16Q9GZN6 736 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 EFCC1Q9HA90 598 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 CD209Q9NNX6 404 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 IFT57Q9NWB7 429 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 SLC27A5Q9Y2P5 690 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 MYBBP1AQ9BQG0 1328 aaKnown RBP11.54□□□□□ -0.56
SRRM1-217ENST00000490543 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 F8W031 263 aaPredicted RBP11.53□□□□□ -0.56
SRRM1-217ENST00000490543 APAF1O14727 1248 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 PPP1R12BO60237 982 aaPredicted RBP11.53□□□□□ -0.56
SRRM1-217ENST00000490543 ITGA6P23229 1130 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 IGHMBP2P38935 993 aaKnown RBP11.53□□□□□ -0.56
SRRM1-217ENST00000490543 GNAI1P63096 354 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 CCDC30Q5VVM6 783 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 G2E3Q7L622 706 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 MTMR14Q8NCE2 650 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 ANKRD2Q9GZV1 360 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 IRS2Q9Y4H2 1338 aa11.53□□□□□ -0.56
SRRM1-217ENST00000490543 TAF5LO75529 589 aa11.52□□□□□ -0.57
SRRM1-217ENST00000490543 CLCN1P35523 988 aa11.52□□□□□ -0.57
SRRM1-217ENST00000490543 SP3Q02447 781 aa11.52□□□□□ -0.57
SRRM1-217ENST00000490543 CHRNDQ07001 517 aa11.52□□□□□ -0.57
SRRM1-217ENST00000490543 CFAP100Q494V2 611 aa11.52□□□□□ -0.57
SRRM1-217ENST00000490543 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.57
SRRM1-217ENST00000490543 HELBQ8NG08 1087 aaPredicted RBP11.52□□□□□ -0.57
SRRM1-217ENST00000490543 THAP11Q96EK4 314 aa11.52□□□□□ -0.57
SRRM1-217ENST00000490543 JAG2Q9Y219 1238 aa11.52□□□□□ -0.57
SRRM1-217ENST00000490543 MYH3P11055 1940 aa11.52□□□□□ -0.57
SRRM1-217ENST00000490543 CSF1RP07333 972 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 KCNJ4P48050 445 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 CASP7P55210 303 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 NEXNQ0ZGT2 675 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 SUPT20HL1Q3ZLR7 823 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 EMID1Q96A84 441 aaPredicted RBP11.51□□□□□ -0.57
SRRM1-217ENST00000490543 ZNF333Q96JL9 665 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 MPHOSPH8Q99549 860 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 ELP3Q9H9T3 547 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 VEZTQ9HBM0 779 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 PPP2R3BQ9Y5P8 575 aa11.51□□□□□ -0.57
SRRM1-217ENST00000490543 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
SRRM1-217ENST00000490543 BRCA2P51587 3418 aa11.5□□□□□ -0.57
SRRM1-217ENST00000490543 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
SRRM1-217ENST00000490543 UNCXA6NJT0 531 aa11.5□□□□□ -0.57
SRRM1-217ENST00000490543 MYCP01106 439 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-217ENST00000490543 IREB2P48200 963 aaKnown RBP11.5□□□□□ -0.57
SRRM1-217ENST00000490543 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
SRRM1-217ENST00000490543 RASA3Q14644 834 aa11.5□□□□□ -0.57
SRRM1-217ENST00000490543 OTUD7BQ6GQQ9 843 aa11.5□□□□□ -0.57
SRRM1-217ENST00000490543 PLA2G12BQ9BX93 195 aa11.5□□□□□ -0.57
SRRM1-217ENST00000490543 PTCH2Q9Y6C5 1203 aa11.5□□□□□ -0.57
SRRM1-217ENST00000490543 KDM4AO75164 1064 aa11.49□□□□□ -0.57
SRRM1-217ENST00000490543 GCKRQ14397 625 aa11.49□□□□□ -0.57
SRRM1-217ENST00000490543 ANKRD13AQ8IZ07 590 aa11.49□□□□□ -0.57
SRRM1-217ENST00000490543 BRI3BPQ8WY22 251 aa11.49□□□□□ -0.57
SRRM1-217ENST00000490543 TSR2Q969E8 191 aaKnown RBP11.49□□□□□ -0.57
SRRM1-217ENST00000490543 OPTNQ96CV9 577 aa11.49□□□□□ -0.57
SRRM1-217ENST00000490543 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
SRRM1-217ENST00000490543 FAM217BQ9NTX9 383 aaPredicted RBP11.49□□□□□ -0.57
SRRM1-217ENST00000490543 H0YGN5 161 aa11.48□□□□□ -0.57
SRRM1-217ENST00000490543 MYO1BO43795 1136 aa11.48□□□□□ -0.57
SRRM1-217ENST00000490543 GFRA3O60609 400 aa11.48□□□□□ -0.57
SRRM1-217ENST00000490543 FMNL1O95466 1100 aaPredicted RBP11.48□□□□□ -0.57
SRRM1-217ENST00000490543 IL1R1P14778 569 aa11.48□□□□□ -0.57
SRRM1-217ENST00000490543 SLC19A1P41440 591 aa11.48□□□□□ -0.57
SRRM1-217ENST00000490543 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.57
SRRM1-217ENST00000490543 CALD1Q05682 793 aaKnown RBP11.48□□□□□ -0.57
SRRM1-217ENST00000490543 SLC9C1Q4G0N8 1177 aa11.48□□□□□ -0.57
SRRM1-217ENST00000490543 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.48□□□□□ -0.57
SRRM1-217ENST00000490543 C15orf52Q6ZUT6 534 aaKnown RBP11.48□□□□□ -0.57
SRRM1-217ENST00000490543 LAMB1P07942 1786 aa11.48□□□□□ -0.57
SRRM1-217ENST00000490543 ANKRD18BA2A2Z9 1011 aa11.47□□□□□ -0.57
SRRM1-217ENST00000490543 SLC4A8Q2Y0W8 1093 aa11.47□□□□□ -0.57
SRRM1-217ENST00000490543 BRICD5Q6PL45 260 aa11.47□□□□□ -0.57
SRRM1-217ENST00000490543 FAM43AQ8N2R8 423 aa11.47□□□□□ -0.57
SRRM1-217ENST00000490543 TEPSINQ96N21 525 aa11.47□□□□□ -0.57
SRRM1-217ENST00000490543 STK31Q9BXU1 1019 aa11.47□□□□□ -0.57
SRRM1-217ENST00000490543 ARHGAP39Q9C0H5 1083 aa11.47□□□□□ -0.57
SRRM1-217ENST00000490543 ZNF70Q9UC06 446 aaPredicted RBP11.47□□□□□ -0.57
SRRM1-217ENST00000490543 SALL2Q9Y467 1007 aaPredicted RBP11.47□□□□□ -0.57
SRRM1-217ENST00000490543 ECM29Q5VYK3 1845 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 CCL15-CCL14A0A0B4J2E2 113 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 FKBP1AP62942 108 aaKnown RBP11.46□□□□□ -0.57
SRRM1-217ENST00000490543 FOXO4P98177 505 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 LAPTM4AQ15012 233 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
SRRM1-217ENST00000490543 CCL15Q16663 113 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 RNF19BQ6ZMZ0 732 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 ZNF804AQ7Z570 1209 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 NBPF11Q86T75 865 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 FAM160A2Q8N612 972 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms