RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PDIA4P13667 645 aaKnown RBP7.16□□□□□ -1.26
HMGN1-218ENST00000490032 FBXO24O75426 580 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 NEFMP07197 916 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 GNA15P30679 374 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 MPRIPQ6WCQ1 1025 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 AEBP1Q8IUX7 1158 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 RNF214Q8ND24 703 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 GRIN3AQ8TCU5 1115 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 CBX8Q9HC52 389 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 CCDC39Q9UFE4 941 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 PCOLCE2Q9UKZ9 415 aa7.15□□□□□ -1.26
HMGN1-218ENST00000490032 ANKRD33BA6NCL7 494 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 HCLS1P14317 486 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-218ENST00000490032 FGD1P98174 961 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 LRRC14Q15048 493 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 RASIP1Q5U651 963 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 MCTP1Q6DN14 999 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 LLGL2Q6P1M3 1020 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 NFXL1Q6ZNB6 911 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 VSIG10LQ86VR7 867 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 LGR6Q9HBX8 967 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 BSDC1Q9NW68 430 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-218ENST00000490032 COL17A1Q9UMD9 1497 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-218ENST00000490032 CYP8B1Q9UNU6 501 aa7.14□□□□□ -1.27
HMGN1-218ENST00000490032 CELA3AP09093 270 aa7.13□□□□□ -1.27
HMGN1-218ENST00000490032 RING1Q06587 406 aa7.13□□□□□ -1.27
HMGN1-218ENST00000490032 CDK5R2Q13319 367 aa7.13□□□□□ -1.27
HMGN1-218ENST00000490032 CYP27C1Q4G0S4 372 aa7.13□□□□□ -1.27
HMGN1-218ENST00000490032 SV2BQ7L1I2 683 aa7.13□□□□□ -1.27
HMGN1-218ENST00000490032 ISL2Q96A47 359 aa7.13□□□□□ -1.27
HMGN1-218ENST00000490032 ACSBG1Q96GR2 724 aa7.13□□□□□ -1.27
HMGN1-218ENST00000490032 ZC3H7BQ9UGR2 993 aaKnown RBP7.13□□□□□ -1.27
HMGN1-218ENST00000490032 RNGTTO60942 597 aaKnown RBP7.12□□□□□ -1.27
HMGN1-218ENST00000490032 EIF4BP23588 611 aaKnown RBP7.12□□□□□ -1.27
HMGN1-218ENST00000490032 NTF4P34130 210 aa7.12□□□□□ -1.27
HMGN1-218ENST00000490032 IRAK1P51617 712 aa7.12□□□□□ -1.27
HMGN1-218ENST00000490032 PCNX4Q63HM2 1172 aa7.12□□□□□ -1.27
HMGN1-218ENST00000490032 DNAJC14Q6Y2X3 702 aaPredicted RBP7.12□□□□□ -1.27
HMGN1-218ENST00000490032 ANGEL1Q9UNK9 670 aaKnown RBP7.12□□□□□ -1.27
HMGN1-218ENST00000490032 AK5Q9Y6K8 562 aa7.12□□□□□ -1.27
HMGN1-218ENST00000490032 FAM87AP0C7U9 286 aa7.11□□□□□ -1.27
HMGN1-218ENST00000490032 EAPPQ56P03 285 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-218ENST00000490032 NPAS4Q8IUM7 802 aa7.11□□□□□ -1.27
HMGN1-218ENST00000490032 DUSP9Q99956 384 aaKnown RBP7.11□□□□□ -1.27
HMGN1-218ENST00000490032 LRRC4CQ9HCJ2 640 aa7.11□□□□□ -1.27
HMGN1-218ENST00000490032 PPM1JQ5JR12 505 aa7.1□□□□□ -1.27
HMGN1-218ENST00000490032 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.1□□□□□ -1.27
HMGN1-218ENST00000490032 FBXL18Q96ME1 805 aa7.1□□□□□ -1.27
HMGN1-218ENST00000490032 DUSP23Q9BVJ7 150 aa7.1□□□□□ -1.27
HMGN1-218ENST00000490032 RNF19AQ9NV58 838 aa7.1□□□□□ -1.27
HMGN1-218ENST00000490032 ADGRE2Q9UHX3 823 aa7.1□□□□□ -1.27
HMGN1-218ENST00000490032 TTF2Q9UNY4 1162 aaKnown RBP7.1□□□□□ -1.27
HMGN1-218ENST00000490032 FANCGO15287 622 aa7.09□□□□□ -1.27
HMGN1-218ENST00000490032 PCDHA4Q9UN74 947 aa7.09□□□□□ -1.27
HMGN1-218ENST00000490032 DCDC2CA8MYV0 355 aa7.08□□□□□ -1.28
HMGN1-218ENST00000490032 LEFTY1O75610 366 aa7.08□□□□□ -1.28
HMGN1-218ENST00000490032 ZBTB37Q5TC79 503 aa7.08□□□□□ -1.28
HMGN1-218ENST00000490032 C12orf40Q86WS4 652 aa7.08□□□□□ -1.28
HMGN1-218ENST00000490032 ABI1Q8IZP0 508 aa7.08□□□□□ -1.28
HMGN1-218ENST00000490032 GAL3ST3Q96A11 431 aa7.08□□□□□ -1.28
HMGN1-218ENST00000490032 MKNK2Q9HBH9 465 aa7.08□□□□□ -1.28
HMGN1-218ENST00000490032 SSU72Q9NP77 194 aaKnown RBP7.08□□□□□ -1.28
HMGN1-218ENST00000490032 CSADQ9Y600 493 aa7.08□□□□□ -1.28
HMGN1-218ENST00000490032 TAL1P17542 331 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-218ENST00000490032 RPS26P62854 115 aaKnown RBP7.07□□□□□ -1.28
HMGN1-218ENST00000490032 PTPN11Q06124 597 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-218ENST00000490032 TTBK2Q6IQ55 1244 aa7.07□□□□□ -1.28
HMGN1-218ENST00000490032 WFDC3Q8IUB2 231 aa7.07□□□□□ -1.28
HMGN1-218ENST00000490032 PAK6Q9NQU5 681 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-218ENST00000490032 DAB2P98082 770 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 INPP5AQ14642 412 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 CCDC85BQ15834 202 aaPredicted RBP7.06□□□□□ -1.28
HMGN1-218ENST00000490032 CBLL1Q75N03 491 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 CYFIP1Q7L576 1253 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 FAM214BQ7L5A3 538 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 UBE3DQ7Z6J8 389 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 FBXO33Q7Z6M2 555 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 STK11IPQ8N1F8 1099 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 TOP6BLQ8N6T0 577 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 KCT2Q8NC54 265 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 NETO1Q8TDF5 533 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 BCL7CQ8WUZ0 217 aaPredicted RBP7.06□□□□□ -1.28
HMGN1-218ENST00000490032 MISP3Q96FF7 219 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 KRTAP9-2Q9BYQ4 174 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 PARP2Q9UGN5 583 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 U3KQE9 123 aa7.06□□□□□ -1.28
HMGN1-218ENST00000490032 OXCT1P55809 520 aa7.05□□□□□ -1.28
HMGN1-218ENST00000490032 LRFN4Q6PJG9 635 aa7.05□□□□□ -1.28
HMGN1-218ENST00000490032 TP53INP2Q8IXH6 220 aa7.05□□□□□ -1.28
HMGN1-218ENST00000490032 PLD6Q8N2A8 252 aaKnown RBP7.05□□□□□ -1.28
HMGN1-218ENST00000490032 FAM181AQ8N9Y4 354 aa7.05□□□□□ -1.28
HMGN1-218ENST00000490032 AGBL5Q8NDL9 886 aa7.05□□□□□ -1.28
HMGN1-218ENST00000490032 FLCNQ8NFG4 579 aa7.05□□□□□ -1.28
HMGN1-218ENST00000490032 ELMO3Q96BJ8 720 aa7.05□□□□□ -1.28
HMGN1-218ENST00000490032 SLC5A6Q9Y289 635 aa7.05□□□□□ -1.28
HMGN1-218ENST00000490032 SNCAIPQ9Y6H5 919 aa7.05□□□□□ -1.28
HMGN1-218ENST00000490032 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.04□□□□□ -1.28
HMGN1-218ENST00000490032 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
HMGN1-218ENST00000490032 TMC4Q7Z404 712 aa7.04□□□□□ -1.28
HMGN1-218ENST00000490032 PLPPR2Q96GM1 343 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms