RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ITPRIPQ8IWB1 547 aa14.62□□□□□ -0.07
SRSF4-204ENST00000489898 EAF2Q96CJ1 260 aaPredicted RBP14.62□□□□□ -0.07
SRSF4-204ENST00000489898 OTUD5Q96G74 571 aa14.62□□□□□ -0.07
SRSF4-204ENST00000489898 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.62□□□□□ -0.07
SRSF4-204ENST00000489898 KCNH4Q9UQ05 1017 aa14.62□□□□□ -0.07
SRSF4-204ENST00000489898 AKAP2Q9Y2D5 859 aa14.62□□□□□ -0.07
SRSF4-204ENST00000489898 ALPK3Q96L96 1907 aa14.62□□□□□ -0.07
SRSF4-204ENST00000489898 RANBP2P49792 3224 aaKnown RBP14.62□□□□□ -0.07
SRSF4-204ENST00000489898 ENTPD3O75355 529 aa14.61□□□□□ -0.07
SRSF4-204ENST00000489898 CYP2E1P05181 493 aaPredicted RBP14.61□□□□□ -0.07
SRSF4-204ENST00000489898 BTDP43251 543 aa14.61□□□□□ -0.07
SRSF4-204ENST00000489898 PPIL2Q13356 520 aa14.61□□□□□ -0.07
SRSF4-204ENST00000489898 RRP1BQ14684 758 aaKnown RBP14.61□□□□□ -0.07
SRSF4-204ENST00000489898 C20orf194Q5TEA3 1177 aa14.61□□□□□ -0.07
SRSF4-204ENST00000489898 MIGA2Q7L4E1 593 aa14.61□□□□□ -0.07
SRSF4-204ENST00000489898 ZNF512BQ96KM6 892 aaPredicted RBP14.61□□□□□ -0.07
SRSF4-204ENST00000489898 GNL3LQ9NVN8 582 aaKnown RBP14.61□□□□□ -0.07
SRSF4-204ENST00000489898 CCL15-CCL14A0A0B4J2E2 113 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 CCDC85CA6NKD9 419 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 FKTNO75072 461 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
SRSF4-204ENST00000489898 ALDH1A1P00352 501 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 CTGFP29279 349 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 INHBEP58166 350 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 CCL15Q16663 113 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 OTOP1Q7RTM1 612 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 ERO1BQ86YB8 467 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 ZNF341Q9BYN7 854 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 DNAJC18Q9H819 358 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 PIH1D3Q9NQM4 214 aaKnown RBP14.6□□□□□ -0.07
SRSF4-204ENST00000489898 USP40Q9NVE5 1235 aa14.6□□□□□ -0.07
SRSF4-204ENST00000489898 BTBD19C9JJ37 291 aa14.59□□□□□ -0.07
SRSF4-204ENST00000489898 DZIP1Q86YF9 867 aaKnown RBP14.59□□□□□ -0.07
SRSF4-204ENST00000489898 FTSJ3Q8IY81 847 aaKnown RBP14.59□□□□□ -0.07
SRSF4-204ENST00000489898 ZGPATQ8N5A5 531 aaKnown RBP14.59□□□□□ -0.07
SRSF4-204ENST00000489898 ZBTB40Q9NUA8 1239 aa14.59□□□□□ -0.07
SRSF4-204ENST00000489898 TMOD2Q9NZR1 351 aa14.59□□□□□ -0.07
SRSF4-204ENST00000489898 ABCF2Q9UG63 623 aa14.59□□□□□ -0.07
SRSF4-204ENST00000489898 SOX10P56693 466 aa14.58□□□□□ -0.08
SRSF4-204ENST00000489898 FBXO46Q6PJ61 603 aaPredicted RBP14.58□□□□□ -0.08
SRSF4-204ENST00000489898 CD99L2Q8TCZ2 262 aa14.58□□□□□ -0.08
SRSF4-204ENST00000489898 NEUROD6Q96NK8 337 aa14.58□□□□□ -0.08
SRSF4-204ENST00000489898 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.08
SRSF4-204ENST00000489898 EXOC6BQ9Y2D4 811 aa14.58□□□□□ -0.08
SRSF4-204ENST00000489898 CSADQ9Y600 493 aa14.58□□□□□ -0.08
SRSF4-204ENST00000489898 NDUFB9Q9Y6M9 179 aa14.58□□□□□ -0.08
SRSF4-204ENST00000489898 FAM196BA6NMK8 535 aa14.57□□□□□ -0.08
SRSF4-204ENST00000489898 SURF6O75683 361 aaKnown RBP14.57□□□□□ -0.08
SRSF4-204ENST00000489898 ZAP70P43403 619 aa14.57□□□□□ -0.08
SRSF4-204ENST00000489898 GTF2A2P52657 109 aa14.57□□□□□ -0.08
SRSF4-204ENST00000489898 JAG1P78504 1218 aa14.57□□□□□ -0.08
SRSF4-204ENST00000489898 PPATQ06203 517 aa14.57□□□□□ -0.08
SRSF4-204ENST00000489898 G3BP1Q13283 466 aaKnown RBP eCLIP14.57□□□□□ -0.08
SRSF4-204ENST00000489898 SHROOM1Q2M3G4 852 aaPredicted RBP14.57□□□□□ -0.08
SRSF4-204ENST00000489898 DCAF15Q66K64 600 aa14.57□□□□□ -0.08
SRSF4-204ENST00000489898 GPAT2Q6NUI2 795 aa14.57□□□□□ -0.08
SRSF4-204ENST00000489898 ARHGAP39Q9C0H5 1083 aa14.57□□□□□ -0.08
SRSF4-204ENST00000489898 SNRKQ9NRH2 765 aa14.57□□□□□ -0.08
SRSF4-204ENST00000489898 DNAH12Q6ZR08 3092 aa14.56□□□□□ -0.08
SRSF4-204ENST00000489898 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
SRSF4-204ENST00000489898 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
SRSF4-204ENST00000489898 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.56□□□□□ -0.08
SRSF4-204ENST00000489898 OSBPL5Q9H0X9 879 aaPredicted RBP14.56□□□□□ -0.08
SRSF4-204ENST00000489898 ANTXR1Q9H6X2 564 aa14.56□□□□□ -0.08
SRSF4-204ENST00000489898 ZCCHC17Q9NP64 241 aaKnown RBP14.56□□□□□ -0.08
SRSF4-204ENST00000489898 SZT2Q5T011 3432 aa14.56□□□□□ -0.08
SRSF4-204ENST00000489898 COL11A1P12107 1806 aaPredicted RBP14.55□□□□□ -0.08
SRSF4-204ENST00000489898 UQCRFS1P1P0C7P4 283 aa14.55□□□□□ -0.08
SRSF4-204ENST00000489898 METTL16Q86W50 562 aaKnown RBP14.55□□□□□ -0.08
SRSF4-204ENST00000489898 SCYL3Q8IZE3 742 aa14.55□□□□□ -0.08
SRSF4-204ENST00000489898 SH3RF3Q8TEJ3 882 aaPredicted RBP14.55□□□□□ -0.08
SRSF4-204ENST00000489898 CCDC8Q9H0W5 538 aaPredicted RBP14.55□□□□□ -0.08
SRSF4-204ENST00000489898 COG6Q9Y2V7 657 aa14.55□□□□□ -0.08
SRSF4-204ENST00000489898 FLT1P17948 1338 aa14.55□□□□□ -0.08
SRSF4-204ENST00000489898 A0A0G2JLL6 359 aaPredicted RBP14.54□□□□□ -0.08
SRSF4-204ENST00000489898 PTPRAP18433 802 aa14.54□□□□□ -0.08
SRSF4-204ENST00000489898 PPP4CP60510 307 aa14.54□□□□□ -0.08
SRSF4-204ENST00000489898 PICALMQ13492 652 aa14.54□□□□□ -0.08
SRSF4-204ENST00000489898 TAF1CQ15572 869 aaPredicted RBP14.54□□□□□ -0.08
SRSF4-204ENST00000489898 PKN2Q16513 984 aaKnown RBP14.54□□□□□ -0.08
SRSF4-204ENST00000489898 C17orf99Q6UX52 265 aa14.54□□□□□ -0.08
SRSF4-204ENST00000489898 PRRT2Q7Z6L0 340 aaPredicted RBP14.54□□□□□ -0.08
SRSF4-204ENST00000489898 AFG3L2Q9Y4W6 797 aa14.54□□□□□ -0.08
SRSF4-204ENST00000489898 TBC1D12O60347 775 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 TLR2O60603 784 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 BCRP11274 1271 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 CETPP11597 493 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 SNAPC2Q13487 334 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 SPTY2D1Q68D10 685 aaPredicted RBP14.53□□□□□ -0.08
SRSF4-204ENST00000489898 ANKRD23Q86SG2 305 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 ARMC5Q96C12 935 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 HOOK2Q96ED9 719 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 RCAN3Q9UKA8 241 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 PTPN22Q9Y2R2 807 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 LAMA3Q16787 3333 aa14.53□□□□□ -0.08
SRSF4-204ENST00000489898 ZNF236Q9UL36 1845 aa14.52□□□□□ -0.08
SRSF4-204ENST00000489898 MAP4K4O95819 1239 aaPredicted RBP14.52□□□□□ -0.09
SRSF4-204ENST00000489898 SP3Q02447 781 aa14.52□□□□□ -0.09
SRSF4-204ENST00000489898 EVX2Q03828 476 aa14.52□□□□□ -0.09
SRSF4-204ENST00000489898 RHPN1Q8TCX5 695 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms