RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 MAST2Q6P0Q8 1798 aa18.67■□□□□ 0.58
SDHAF3-204ENST00000489852 LTBP2Q14767 1821 aa18.67■□□□□ 0.58
SDHAF3-204ENST00000489852 IFIT5Q13325 482 aaKnown RBP18.66■□□□□ 0.58
SDHAF3-204ENST00000489852 ALYREFQ86V81 257 aaKnown RBP18.66■□□□□ 0.58
SDHAF3-204ENST00000489852 FAM84BQ96KN1 310 aaPredicted RBP18.66■□□□□ 0.58
SDHAF3-204ENST00000489852 MRIQ9BWK5 157 aa18.66■□□□□ 0.58
SDHAF3-204ENST00000489852 MBIPQ9NS73 344 aa18.66■□□□□ 0.58
SDHAF3-204ENST00000489852 PNMA3Q9UL41 463 aa18.66■□□□□ 0.58
SDHAF3-204ENST00000489852 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
SDHAF3-204ENST00000489852 AK9Q5TCS8 1911 aa18.66■□□□□ 0.58
SDHAF3-204ENST00000489852 PTPRAP18433 802 aa18.65■□□□□ 0.58
SDHAF3-204ENST00000489852 ATN1P54259 1190 aaPredicted RBP18.65■□□□□ 0.58
SDHAF3-204ENST00000489852 TCP10Q12799 353 aa18.65■□□□□ 0.58
SDHAF3-204ENST00000489852 CHAF1AQ13111 956 aaPredicted RBP18.65■□□□□ 0.58
SDHAF3-204ENST00000489852 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
SDHAF3-204ENST00000489852 AGTPBP1Q9UPW5 1226 aa18.65■□□□□ 0.58
SDHAF3-204ENST00000489852 CACNB2Q08289 660 aaPredicted RBP18.64■□□□□ 0.57
SDHAF3-204ENST00000489852 TBC1D22AQ8WUA7 517 aa18.64■□□□□ 0.57
SDHAF3-204ENST00000489852 LRFN3Q9BTN0 628 aa18.64■□□□□ 0.57
SDHAF3-204ENST00000489852 NCOR1O75376 2440 aa18.63■□□□□ 0.57
SDHAF3-204ENST00000489852 CCND3P30281 292 aaPredicted RBP18.63■□□□□ 0.57
SDHAF3-204ENST00000489852 GCLCP48506 637 aaPredicted RBP18.63■□□□□ 0.57
SDHAF3-204ENST00000489852 CASP7P55210 303 aa18.63■□□□□ 0.57
SDHAF3-204ENST00000489852 GCKRQ14397 625 aa18.63■□□□□ 0.57
SDHAF3-204ENST00000489852 PDE3AQ14432 1141 aa18.63■□□□□ 0.57
SDHAF3-204ENST00000489852 BADQ92934 168 aa18.63■□□□□ 0.57
SDHAF3-204ENST00000489852 IQSEC3Q9UPP2 1182 aaPredicted RBP18.63■□□□□ 0.57
SDHAF3-204ENST00000489852 CHMP3Q9Y3E7 222 aa18.63■□□□□ 0.57
SDHAF3-204ENST00000489852 BDP1A6H8Y1 2624 aa18.62■□□□□ 0.57
SDHAF3-204ENST00000489852 TRIM75PA6NK02 468 aa18.62■□□□□ 0.57
SDHAF3-204ENST00000489852 RTP1P59025 263 aa18.62■□□□□ 0.57
SDHAF3-204ENST00000489852 UBE4AQ14139 1066 aa18.62■□□□□ 0.57
SDHAF3-204ENST00000489852 TREML2Q5T2D2 321 aa18.62■□□□□ 0.57
SDHAF3-204ENST00000489852 LDHAL6AQ6ZMR3 332 aa18.62■□□□□ 0.57
SDHAF3-204ENST00000489852 PLXNB2O15031 1838 aa18.62■□□□□ 0.57
SDHAF3-204ENST00000489852 PTPRFP10586 1907 aa18.62■□□□□ 0.57
SDHAF3-204ENST00000489852 PHF20L1A8MW92 1017 aa18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 XRCC5P13010 732 aaKnown RBP18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 ZKSCAN1P17029 563 aaPredicted RBP18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 HHIPL2Q6UWX4 724 aa18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 VPS37DQ86XT2 251 aa18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 TRMT44Q8IYL2 757 aaKnown RBP18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 PRDM5Q9NQX1 630 aaPredicted RBP18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 CNNM1Q9NRU3 951 aa18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 ATP11BQ9Y2G3 1177 aa18.61■□□□□ 0.57
SDHAF3-204ENST00000489852 MAST3O60307 1309 aa18.6■□□□□ 0.57
SDHAF3-204ENST00000489852 FRAT2O75474 233 aaPredicted RBP18.6■□□□□ 0.57
SDHAF3-204ENST00000489852 RNPC3Q96LT9 517 aaKnown RBP18.6■□□□□ 0.57
SDHAF3-204ENST00000489852 NECAB3Q96P71 396 aaPredicted RBP18.6■□□□□ 0.57
SDHAF3-204ENST00000489852 GAS2L1Q99501 681 aaPredicted RBP18.6■□□□□ 0.57
SDHAF3-204ENST00000489852 NUDT12Q9BQG2 462 aa18.6■□□□□ 0.57
SDHAF3-204ENST00000489852 ZNF576Q9H609 170 aa18.6■□□□□ 0.57
SDHAF3-204ENST00000489852 TAF7LQ5H9L4 462 aa18.59■□□□□ 0.57
SDHAF3-204ENST00000489852 AKNAD1Q5T1N1 836 aa18.59■□□□□ 0.57
SDHAF3-204ENST00000489852 POTEEQ6S8J3 1075 aa18.59■□□□□ 0.57
SDHAF3-204ENST00000489852 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
SDHAF3-204ENST00000489852 ZNF594Q96JF6 807 aaPredicted RBP18.59■□□□□ 0.57
SDHAF3-204ENST00000489852 CHMP4AQ9BY43 222 aa18.59■□□□□ 0.57
SDHAF3-204ENST00000489852 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
SDHAF3-204ENST00000489852 PIEZO1Q92508 2521 aa18.59■□□□□ 0.57
SDHAF3-204ENST00000489852 DNAJB2P25686 324 aa18.58■□□□□ 0.56
SDHAF3-204ENST00000489852 NFIAQ12857 509 aa18.58■□□□□ 0.56
SDHAF3-204ENST00000489852 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
SDHAF3-204ENST00000489852 SOCS4Q8WXH5 440 aa18.58■□□□□ 0.56
SDHAF3-204ENST00000489852 FOXO4P98177 505 aa18.57■□□□□ 0.56
SDHAF3-204ENST00000489852 FBXO33Q7Z6M2 555 aa18.57■□□□□ 0.56
SDHAF3-204ENST00000489852 MYH16Q9H6N6 1097 aa18.57■□□□□ 0.56
SDHAF3-204ENST00000489852 SUGT1Q9Y2Z0 365 aa18.57■□□□□ 0.56
SDHAF3-204ENST00000489852 LRRFIP2Q9Y608 721 aaKnown RBP18.57■□□□□ 0.56
SDHAF3-204ENST00000489852 CCDC57Q2TAC2 916 aa18.56■□□□□ 0.56
SDHAF3-204ENST00000489852 TMEM31Q5JXX7 168 aa18.56■□□□□ 0.56
SDHAF3-204ENST00000489852 CDC42EP5Q6NZY7 148 aa18.56■□□□□ 0.56
SDHAF3-204ENST00000489852 C8orf58Q8NAV2 365 aa18.56■□□□□ 0.56
SDHAF3-204ENST00000489852 PROCA1Q8NCQ7 364 aaPredicted RBP18.56■□□□□ 0.56
SDHAF3-204ENST00000489852 EPHX3Q9H6B9 360 aa18.56■□□□□ 0.56
SDHAF3-204ENST00000489852 FRMPD3Q5JV73 1810 aa18.56■□□□□ 0.56
SDHAF3-204ENST00000489852 PABPC4Q13310 644 aaKnown RBP eCLIP18.55■□□□□ 0.56
SDHAF3-204ENST00000489852 CCDC85BQ15834 202 aaPredicted RBP18.55■□□□□ 0.56
SDHAF3-204ENST00000489852 CCL14Q16627 93 aa18.55■□□□□ 0.56
SDHAF3-204ENST00000489852 SPINK5Q9NQ38 1064 aaPredicted RBP18.55■□□□□ 0.56
SDHAF3-204ENST00000489852 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.55■□□□□ 0.56
SDHAF3-204ENST00000489852 FAM198AQ9UFP1 575 aa18.55■□□□□ 0.56
SDHAF3-204ENST00000489852 PHIPQ8WWQ0 1821 aa18.55■□□□□ 0.56
SDHAF3-204ENST00000489852 TCF20Q9UGU0 1960 aaKnown RBP18.55■□□□□ 0.56
SDHAF3-204ENST00000489852 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 DNM1LO00429 736 aa18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 CTNND1O60716 968 aaKnown RBP18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 ZNF853P0CG23 659 aa18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 CCDC84Q86UT8 332 aaPredicted RBP18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 ZFPM1Q8IX07 1006 aa18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 TIFAQ96CG3 184 aa18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 ASCC2Q9H1I8 757 aaPredicted RBP18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 MORF4L1Q9UBU8 362 aa18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 ATRNL1Q5VV63 1379 aa18.54■□□□□ 0.56
SDHAF3-204ENST00000489852 RGS2P41220 211 aa18.53■□□□□ 0.56
SDHAF3-204ENST00000489852 LMBR1LQ6UX01 489 aa18.53■□□□□ 0.56
SDHAF3-204ENST00000489852 SLC39A5Q6ZMH5 540 aa18.53■□□□□ 0.56
SDHAF3-204ENST00000489852 LPAR1Q92633 364 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms