RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 M0R2C6 588 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 NPR1P16066 1061 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 GPSM2P81274 684 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 ELF2Q15723 593 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 SPATA5Q8NB90 893 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 CXorf56Q9H5V9 222 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 MYH1P12882 1939 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 ZFYP08048 801 aaPredicted RBP11.42□□□□□ -0.58
NOD1-208ENST00000489614 UBE3CQ15386 1083 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 CWC27Q6UX04 472 aaKnown RBP11.42□□□□□ -0.58
NOD1-208ENST00000489614 RUFY2Q8WXA3 655 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 FSD1Q9BTV5 496 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 DEF6Q9H4E7 631 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 SMTNL1A8MU46 457 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 SBF1O95248 1867 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 IL1R1P14778 569 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 BCAMP50895 628 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 TTF1Q15361 905 aaPredicted RBP11.42□□□□□ -0.58
NOD1-208ENST00000489614 MCMDC2Q4G0Z9 681 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 TTC14Q96N46 770 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 DSCC1Q9BVC3 393 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 RTFDC1Q9BY42 306 aaPredicted RBP11.42□□□□□ -0.58
NOD1-208ENST00000489614 ALDH8A1Q9H2A2 487 aaPredicted RBP11.42□□□□□ -0.58
NOD1-208ENST00000489614 ZNF215Q9UL58 517 aaPredicted RBP11.42□□□□□ -0.58
NOD1-208ENST00000489614 ATP6V0A2Q9Y487 856 aa11.42□□□□□ -0.58
NOD1-208ENST00000489614 SEMA3FQ13275 785 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 TXNRD3Q86VQ6 643 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 GOLGA6L1Q8N7Z2 621 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 OSBP2Q969R2 916 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 ZDHHC9Q9Y397 364 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 SNX14Q9Y5W7 946 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 KCNA3P22001 575 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 PDE6BP35913 854 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 RABEP1Q15276 862 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 ZSCAN26Q16670 478 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 SLFNL1Q499Z3 407 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 TDRD7Q8NHU6 1098 aaKnown RBP11.41□□□□□ -0.58
NOD1-208ENST00000489614 BRMS1Q9HCU9 246 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 PTGS1P23219 599 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 LRMPQ12912 555 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
NOD1-208ENST00000489614 MASTLQ96GX5 879 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 SEC62Q99442 399 aaKnown RBP11.41□□□□□ -0.58
NOD1-208ENST00000489614 TM6SF1Q9BZW5 370 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
NOD1-208ENST00000489614 MBD3O95983 291 aa11.4□□□□□ -0.58
NOD1-208ENST00000489614 APPBP2Q92624 585 aa11.4□□□□□ -0.58
NOD1-208ENST00000489614 SGSM3Q96HU1 749 aa11.4□□□□□ -0.58
NOD1-208ENST00000489614 ZCCHC17Q9NP64 241 aaKnown RBP11.4□□□□□ -0.58
NOD1-208ENST00000489614 BMS1Q14692 1282 aaKnown RBP11.4□□□□□ -0.58
NOD1-208ENST00000489614 PACS2Q86VP3 889 aa11.4□□□□□ -0.58
NOD1-208ENST00000489614 DONSONQ9NYP3 566 aa11.4□□□□□ -0.58
NOD1-208ENST00000489614 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
NOD1-208ENST00000489614 GADD45BO75293 160 aaPredicted RBP11.39□□□□□ -0.59
NOD1-208ENST00000489614 ATP2B4P23634 1241 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 TTC31Q49AM3 519 aaPredicted RBP11.39□□□□□ -0.59
NOD1-208ENST00000489614 RPGRQ92834 1020 aaKnown RBP11.39□□□□□ -0.59
NOD1-208ENST00000489614 POLLQ9UGP5 575 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 MYH8P13535 1937 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 ANKRD65E5RJM6 399 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 KDM4AO75164 1064 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 GYG1P46976 350 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 SYCP1Q15431 976 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 TPD52L1Q16890 204 aaPredicted RBP11.39□□□□□ -0.59
NOD1-208ENST00000489614 TEX35Q5T0J7 233 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 TBC1D16Q8TBP0 767 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 WWC3Q9ULE0 1092 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 AP5Z1O43299 807 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 SMARCE1Q969G3 411 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 PUS7LQ9H0K6 701 aaKnown RBP11.39□□□□□ -0.59
NOD1-208ENST00000489614 RRP15Q9Y3B9 282 aaKnown RBP11.39□□□□□ -0.59
NOD1-208ENST00000489614 SH3BP1Q9Y3L3 701 aa11.39□□□□□ -0.59
NOD1-208ENST00000489614 SLC27A2O14975 620 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 PDE6AP16499 860 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 SYAP1Q96A49 352 aaPredicted RBP11.38□□□□□ -0.59
NOD1-208ENST00000489614 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 DENND2AQ9ULE3 1009 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 RBM8AQ9Y5S9 174 aaKnown RBP11.38□□□□□ -0.59
NOD1-208ENST00000489614 TAF6LQ9Y6J9 622 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 FAM205AQ6ZU69 1335 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 COL9A3Q14050 684 aaPredicted RBP11.38□□□□□ -0.59
NOD1-208ENST00000489614 ALX1Q15699 326 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 CREB3L3Q68CJ9 461 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 MSL1Q68DK7 614 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 CCDC129Q6ZRS4 1044 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 DRC7Q8IY82 874 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 TXLNBQ8N3L3 684 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 ANO2Q9NQ90 1003 aa11.38□□□□□ -0.59
NOD1-208ENST00000489614 ZBTB12Q9Y330 459 aaPredicted RBP11.38□□□□□ -0.59
NOD1-208ENST00000489614 HSPD1P10809 573 aaKnown RBP11.37□□□□□ -0.59
NOD1-208ENST00000489614 PPP2R5AQ15172 486 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 VPS53Q5VIR6 699 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 ADGRA1Q86SQ6 560 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 FBXL16Q8N461 479 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 ATP2B1P20020 1258 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 ALDH1B1P30837 517 aa11.37□□□□□ -0.59
NOD1-208ENST00000489614 MAP2K1Q02750 393 aaPredicted RBP11.37□□□□□ -0.59
NOD1-208ENST00000489614 FKBP4Q02790 459 aaKnown RBP eCLIP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms