RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 MECOMQ03112 1051 aa16.54■□□□□ 0.24
LINC00173-204ENST00000489452 MOGSQ13724 837 aa16.54■□□□□ 0.24
LINC00173-204ENST00000489452 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
LINC00173-204ENST00000489452 NOL9Q5SY16 702 aaKnown RBP16.54■□□□□ 0.24
LINC00173-204ENST00000489452 ERICH6Q7L0X2 663 aa16.54■□□□□ 0.24
LINC00173-204ENST00000489452 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
LINC00173-204ENST00000489452 DDX4Q9NQI0 724 aaKnown RBP16.54■□□□□ 0.24
LINC00173-204ENST00000489452 GAKO14976 1311 aa16.53■□□□□ 0.24
LINC00173-204ENST00000489452 CYP2C8P10632 490 aa16.53■□□□□ 0.24
LINC00173-204ENST00000489452 TRIM27P14373 513 aa16.53■□□□□ 0.24
LINC00173-204ENST00000489452 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
LINC00173-204ENST00000489452 PI16Q6UXB8 463 aa16.53■□□□□ 0.24
LINC00173-204ENST00000489452 TRIM47Q96LD4 638 aa16.53■□□□□ 0.24
LINC00173-204ENST00000489452 HMG20BQ9P0W2 317 aa16.53■□□□□ 0.24
LINC00173-204ENST00000489452 PNMA6EA0A0J9YXQ4 647 aa16.52■□□□□ 0.24
LINC00173-204ENST00000489452 CXCL11O14625 94 aa16.52■□□□□ 0.24
LINC00173-204ENST00000489452 PTPRAP18433 802 aa16.52■□□□□ 0.24
LINC00173-204ENST00000489452 MTX1Q13505 466 aa16.52■□□□□ 0.24
LINC00173-204ENST00000489452 GPAT2Q6NUI2 795 aa16.52■□□□□ 0.24
LINC00173-204ENST00000489452 ATF7IPQ6VMQ6 1270 aa16.52■□□□□ 0.24
LINC00173-204ENST00000489452 GADL1Q6ZQY3 521 aa16.52■□□□□ 0.24
LINC00173-204ENST00000489452 SCYL3Q8IZE3 742 aa16.52■□□□□ 0.24
LINC00173-204ENST00000489452 FAM163AQ96GL9 167 aaPredicted RBP16.52■□□□□ 0.24
LINC00173-204ENST00000489452 MROH7-TTC4A0A0A0MT08 1334 aa16.51■□□□□ 0.23
LINC00173-204ENST00000489452 MYH2Q9UKX2 1941 aa16.51■□□□□ 0.23
LINC00173-204ENST00000489452 CEP290O15078 2479 aa16.51■□□□□ 0.23
LINC00173-204ENST00000489452 CCDC84Q86UT8 332 aaPredicted RBP16.51■□□□□ 0.23
LINC00173-204ENST00000489452 SPATA5Q8NB90 893 aa16.51■□□□□ 0.23
LINC00173-204ENST00000489452 RAET1EQ8TD07 263 aa16.51■□□□□ 0.23
LINC00173-204ENST00000489452 ZNF384Q8TF68 577 aa16.51■□□□□ 0.23
LINC00173-204ENST00000489452 RAI14Q9P0K7 980 aa16.51■□□□□ 0.23
LINC00173-204ENST00000489452 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.51■□□□□ 0.23
LINC00173-204ENST00000489452 SRRDQ9UH36 339 aa16.51■□□□□ 0.23
LINC00173-204ENST00000489452 ZSWIM8A7E2V4 1837 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 GPR75-ASB3A0A0A6YYF3 556 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 GNRH1P01148 92 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 OSBPP22059 807 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 HOXD10P28358 340 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 PRMT2P55345 433 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 MTFR1Q15390 333 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 FASTKD5Q7L8L6 764 aaKnown RBP16.5■□□□□ 0.23
LINC00173-204ENST00000489452 PARK7Q99497 189 aaKnown RBP16.5■□□□□ 0.23
LINC00173-204ENST00000489452 BIN2Q9UBW5 565 aaPredicted RBP16.5■□□□□ 0.23
LINC00173-204ENST00000489452 AFG3L2Q9Y4W6 797 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 ATRNL1Q5VV63 1379 aa16.5■□□□□ 0.23
LINC00173-204ENST00000489452 PDS5AQ29RF7 1337 aaKnown RBP16.49■□□□□ 0.23
LINC00173-204ENST00000489452 TRIM75PA6NK02 468 aa16.49■□□□□ 0.23
LINC00173-204ENST00000489452 ZBTB22O15209 634 aa16.49■□□□□ 0.23
LINC00173-204ENST00000489452 CTNND1O60716 968 aaKnown RBP16.49■□□□□ 0.23
LINC00173-204ENST00000489452 LDHCP07864 332 aa16.49■□□□□ 0.23
LINC00173-204ENST00000489452 RHBDL3P58872 404 aa16.49■□□□□ 0.23
LINC00173-204ENST00000489452 MAP3K10Q02779 954 aa16.49■□□□□ 0.23
LINC00173-204ENST00000489452 TMEM57Q8N5G2 664 aa16.49■□□□□ 0.23
LINC00173-204ENST00000489452 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
LINC00173-204ENST00000489452 LRP2BPQ9P2M1 347 aa16.49■□□□□ 0.23
LINC00173-204ENST00000489452 ADGRA2Q96PE1 1338 aa16.48■□□□□ 0.23
LINC00173-204ENST00000489452 A0A0G2JLL6 359 aaPredicted RBP16.48■□□□□ 0.23
LINC00173-204ENST00000489452 GRK4P32298 578 aa16.48■□□□□ 0.23
LINC00173-204ENST00000489452 GSTO1P78417 241 aa16.48■□□□□ 0.23
LINC00173-204ENST00000489452 OS9Q13438 667 aaPredicted RBP16.48■□□□□ 0.23
LINC00173-204ENST00000489452 PRRT2Q7Z6L0 340 aaPredicted RBP16.48■□□□□ 0.23
LINC00173-204ENST00000489452 NSUN4Q96CB9 384 aaKnown RBP16.48■□□□□ 0.23
LINC00173-204ENST00000489452 GCC1Q96CN9 775 aa16.48■□□□□ 0.23
LINC00173-204ENST00000489452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00173-204ENST00000489452 MYPNQ86TC9 1320 aa16.47■□□□□ 0.23
LINC00173-204ENST00000489452 BCRP11274 1271 aa16.47■□□□□ 0.23
LINC00173-204ENST00000489452 MCAMP43121 646 aa16.47■□□□□ 0.23
LINC00173-204ENST00000489452 ZKSCAN2Q63HK3 967 aa16.47■□□□□ 0.23
LINC00173-204ENST00000489452 UQCRFS1P1P0C7P4 283 aa16.46■□□□□ 0.23
LINC00173-204ENST00000489452 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
LINC00173-204ENST00000489452 FCGRTP55899 365 aa16.46■□□□□ 0.23
LINC00173-204ENST00000489452 PRKCZQ05513 592 aa16.46■□□□□ 0.23
LINC00173-204ENST00000489452 HABP4Q5JVS0 413 aaKnown RBP16.46■□□□□ 0.23
LINC00173-204ENST00000489452 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
LINC00173-204ENST00000489452 C1orf115Q9H7X2 142 aa16.46■□□□□ 0.23
LINC00173-204ENST00000489452 GABRQQ9UN88 632 aa16.46■□□□□ 0.23
LINC00173-204ENST00000489452 RFX7Q2KHR2 1363 aa16.46■□□□□ 0.23
LINC00173-204ENST00000489452 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
LINC00173-204ENST00000489452 SPP2Q13103 211 aa16.45■□□□□ 0.22
LINC00173-204ENST00000489452 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
LINC00173-204ENST00000489452 SH3RF3Q8TEJ3 882 aaPredicted RBP16.45■□□□□ 0.22
LINC00173-204ENST00000489452 SMCR8Q8TEV9 937 aaPredicted RBP16.45■□□□□ 0.22
LINC00173-204ENST00000489452 TBC1D12O60347 775 aa16.44■□□□□ 0.22
LINC00173-204ENST00000489452 CCL5P13501 91 aa16.44■□□□□ 0.22
LINC00173-204ENST00000489452 ATP8B2P98198 1209 aa16.44■□□□□ 0.22
LINC00173-204ENST00000489452 TREML2Q5T2D2 321 aa16.44■□□□□ 0.22
LINC00173-204ENST00000489452 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
LINC00173-204ENST00000489452 DBNDD2Q9BQY9 259 aa16.44■□□□□ 0.22
LINC00173-204ENST00000489452 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
LINC00173-204ENST00000489452 RNF208Q9H0X6 261 aa16.44■□□□□ 0.22
LINC00173-204ENST00000489452 OSBPL5Q9H0X9 879 aaPredicted RBP16.44■□□□□ 0.22
LINC00173-204ENST00000489452 PCDH10Q9P2E7 1040 aa16.44■□□□□ 0.22
LINC00173-204ENST00000489452 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
LINC00173-204ENST00000489452 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
LINC00173-204ENST00000489452 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00173-204ENST00000489452 RRP1BQ14684 758 aaKnown RBP16.43■□□□□ 0.22
LINC00173-204ENST00000489452 TNNI3KQ59H18 835 aa16.43■□□□□ 0.22
LINC00173-204ENST00000489452 CCDC158Q5M9N0 1113 aa16.43■□□□□ 0.22
LINC00173-204ENST00000489452 ANKRD13CQ8N6S4 541 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms