RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 COL25A1Q9BXS0 654 aaPredicted RBP14.61□□□□□ -0.07
ACTN4-206ENST00000489451 IDI2Q9BXS1 227 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 GNL3LQ9NVN8 582 aaKnown RBP14.61□□□□□ -0.07
ACTN4-206ENST00000489451 PDS5AQ29RF7 1337 aaKnown RBP14.61□□□□□ -0.07
ACTN4-206ENST00000489451 MGAMO43451 1857 aa14.61□□□□□ -0.07
ACTN4-206ENST00000489451 DDTLA6NHG4 134 aaPredicted RBP14.6□□□□□ -0.07
ACTN4-206ENST00000489451 SRGAP3O43295 1099 aa14.6□□□□□ -0.07
ACTN4-206ENST00000489451 MAP3K10Q02779 954 aa14.6□□□□□ -0.07
ACTN4-206ENST00000489451 ANKRD23Q86SG2 305 aa14.6□□□□□ -0.07
ACTN4-206ENST00000489451 SH3TC2Q8TF17 1288 aa14.6□□□□□ -0.07
ACTN4-206ENST00000489451 FAM163AQ96GL9 167 aaPredicted RBP14.6□□□□□ -0.07
ACTN4-206ENST00000489451 XAGE2Q96GT9 111 aa14.6□□□□□ -0.07
ACTN4-206ENST00000489451 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.6□□□□□ -0.07
ACTN4-206ENST00000489451 CPA4Q9UI42 421 aa14.6□□□□□ -0.07
ACTN4-206ENST00000489451 SIPA1L1O43166 1804 aa14.59□□□□□ -0.07
ACTN4-206ENST00000489451 PNMA6EA0A0J9YXQ4 647 aa14.59□□□□□ -0.07
ACTN4-206ENST00000489451 PDHXO00330 501 aa14.59□□□□□ -0.07
ACTN4-206ENST00000489451 BCAR3O75815 825 aa14.59□□□□□ -0.07
ACTN4-206ENST00000489451 ECM2O94769 699 aaPredicted RBP14.59□□□□□ -0.07
ACTN4-206ENST00000489451 RHBDL3P58872 404 aa14.59□□□□□ -0.07
ACTN4-206ENST00000489451 SLC9C1Q4G0N8 1177 aa14.59□□□□□ -0.07
ACTN4-206ENST00000489451 ENTPD3O75355 529 aa14.58□□□□□ -0.08
ACTN4-206ENST00000489451 BTDP43251 543 aa14.58□□□□□ -0.08
ACTN4-206ENST00000489451 MECOMQ03112 1051 aa14.58□□□□□ -0.08
ACTN4-206ENST00000489451 TRIM47Q96LD4 638 aa14.58□□□□□ -0.08
ACTN4-206ENST00000489451 HMG20BQ9P0W2 317 aa14.58□□□□□ -0.08
ACTN4-206ENST00000489451 ABCF2Q9UG63 623 aa14.58□□□□□ -0.08
ACTN4-206ENST00000489451 MYO5AQ9Y4I1 1855 aaKnown RBP14.58□□□□□ -0.08
ACTN4-206ENST00000489451 MROH7-TTC4A0A0A0MT08 1334 aa14.58□□□□□ -0.08
ACTN4-206ENST00000489451 ATAD5Q96QE3 1844 aa14.57□□□□□ -0.08
ACTN4-206ENST00000489451 MYCP01106 439 aaPredicted RBP14.57□□□□□ -0.08
ACTN4-206ENST00000489451 GNAI3P08754 354 aa14.57□□□□□ -0.08
ACTN4-206ENST00000489451 BCRP11274 1271 aa14.57□□□□□ -0.08
ACTN4-206ENST00000489451 PTPRAP18433 802 aa14.57□□□□□ -0.08
ACTN4-206ENST00000489451 CCDC84Q86UT8 332 aaPredicted RBP14.57□□□□□ -0.08
ACTN4-206ENST00000489451 DZIP1Q86YF9 867 aaKnown RBP14.57□□□□□ -0.08
ACTN4-206ENST00000489451 SCYL3Q8IZE3 742 aa14.57□□□□□ -0.08
ACTN4-206ENST00000489451 ZGPATQ8N5A5 531 aaKnown RBP14.57□□□□□ -0.08
ACTN4-206ENST00000489451 SHISA4Q96DD7 197 aa14.57□□□□□ -0.08
ACTN4-206ENST00000489451 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
ACTN4-206ENST00000489451 MAST2Q6P0Q8 1798 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 GPR75-ASB3A0A0A6YYF3 556 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 A0A0G2JLL6 359 aaPredicted RBP14.56□□□□□ -0.08
ACTN4-206ENST00000489451 CXCL11O14625 94 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 CYP2C8P10632 490 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 OSBPP22059 807 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 MTFR1Q15390 333 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 SLC4A8Q2Y0W8 1093 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 ATF7IPQ6VMQ6 1270 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 TBC1D9Q6ZT07 1266 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 PRRT2Q7Z6L0 340 aaPredicted RBP14.56□□□□□ -0.08
ACTN4-206ENST00000489451 HDAC5Q9UQL6 1122 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 AFG3L2Q9Y4W6 797 aa14.56□□□□□ -0.08
ACTN4-206ENST00000489451 LOC285556D6RIA3 1793 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 FAM196BA6NMK8 535 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 ARID4AP29374 1257 aaPredicted RBP14.55□□□□□ -0.08
ACTN4-206ENST00000489451 MCAMP43121 646 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 PSMC4P43686 418 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 PICALMQ13492 652 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 RRP1BQ14684 758 aaKnown RBP14.55□□□□□ -0.08
ACTN4-206ENST00000489451 MVPQ14764 893 aaKnown RBP14.55□□□□□ -0.08
ACTN4-206ENST00000489451 DPF3Q92784 378 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 CLUAP1Q96AJ1 413 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 NSUN4Q96CB9 384 aaKnown RBP14.55□□□□□ -0.08
ACTN4-206ENST00000489451 SRRDQ9UH36 339 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 ZHX2Q9Y6X8 837 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 FOCADQ5VW36 1801 aa14.55□□□□□ -0.08
ACTN4-206ENST00000489451 GNRH1P01148 92 aa14.54□□□□□ -0.08
ACTN4-206ENST00000489451 GNAI2P04899 355 aa14.54□□□□□ -0.08
ACTN4-206ENST00000489451 ARHGEF6Q15052 776 aa14.54□□□□□ -0.08
ACTN4-206ENST00000489451 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
ACTN4-206ENST00000489451 TMEM57Q8N5G2 664 aa14.54□□□□□ -0.08
ACTN4-206ENST00000489451 SPATA5Q8NB90 893 aa14.54□□□□□ -0.08
ACTN4-206ENST00000489451 AKAP2Q9Y2D5 859 aa14.54□□□□□ -0.08
ACTN4-206ENST00000489451 DOCK3Q8IZD9 2030 aa14.53□□□□□ -0.08
ACTN4-206ENST00000489451 COL2A1P02458 1487 aaPredicted RBP14.53□□□□□ -0.08
ACTN4-206ENST00000489451 PRMT2P55345 433 aa14.53□□□□□ -0.08
ACTN4-206ENST00000489451 POLA2Q14181 598 aa14.53□□□□□ -0.08
ACTN4-206ENST00000489451 KIF22Q14807 665 aa14.53□□□□□ -0.08
ACTN4-206ENST00000489451 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
ACTN4-206ENST00000489451 NBPF11Q86T75 865 aa14.53□□□□□ -0.08
ACTN4-206ENST00000489451 FRAT1Q92837 279 aaPredicted RBP14.53□□□□□ -0.08
ACTN4-206ENST00000489451 LRCH3Q96II8 777 aa14.53□□□□□ -0.08
ACTN4-206ENST00000489451 NEUROD6Q96NK8 337 aa14.53□□□□□ -0.08
ACTN4-206ENST00000489451 PARK7Q99497 189 aaKnown RBP14.53□□□□□ -0.08
ACTN4-206ENST00000489451 GABRQQ9UN88 632 aa14.53□□□□□ -0.08
ACTN4-206ENST00000489451 MYPNQ86TC9 1320 aa14.52□□□□□ -0.08
ACTN4-206ENST00000489451 SOX1O00570 391 aaPredicted RBP14.52□□□□□ -0.09
ACTN4-206ENST00000489451 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
ACTN4-206ENST00000489451 PRKCZQ05513 592 aa14.52□□□□□ -0.09
ACTN4-206ENST00000489451 SPTY2D1Q68D10 685 aaPredicted RBP14.52□□□□□ -0.09
ACTN4-206ENST00000489451 ZSCAN29Q8IWY8 852 aaPredicted RBP14.52□□□□□ -0.09
ACTN4-206ENST00000489451 RANBP2P49792 3224 aaKnown RBP14.52□□□□□ -0.09
ACTN4-206ENST00000489451 TBC1D12O60347 775 aa14.51□□□□□ -0.09
ACTN4-206ENST00000489451 CTNND1O60716 968 aaKnown RBP14.51□□□□□ -0.09
ACTN4-206ENST00000489451 TREML2Q5T2D2 321 aa14.51□□□□□ -0.09
ACTN4-206ENST00000489451 UBE2Q1Q7Z7E8 422 aa14.51□□□□□ -0.09
ACTN4-206ENST00000489451 SLF2Q8IX21 1173 aa14.51□□□□□ -0.09
ACTN4-206ENST00000489451 OSBPL5Q9H0X9 879 aaPredicted RBP14.51□□□□□ -0.09
ACTN4-206ENST00000489451 PICK1Q9NRD5 415 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms