RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 BEND3Q5T5X7 828 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 HDAC9Q9UKV0 1011 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 ANGEL1Q9UNK9 670 aaKnown RBP19.74■□□□□ 0.75
NPHP4-209ENST00000489180 BIVM-ERCC5R4GMW8 1640 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 TRMT44Q8IYL2 757 aaKnown RBP19.73■□□□□ 0.75
NPHP4-209ENST00000489180 SUCLG2Q96I99 432 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 TRIM31Q9BZY9 425 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 TUBBP07437 444 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 TMEM87BQ96K49 555 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 NYXQ9GZU5 481 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 ATP10BO94823 1461 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 A2MP01023 1474 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 IL13P35225 146 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 TXKP42681 527 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 PAK1Q13153 545 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 CCDC26Q8TAB7 109 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 EPB41P11171 864 aaKnown RBP19.73■□□□□ 0.75
NPHP4-209ENST00000489180 SETDB1Q15047 1291 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 TMEM87AQ8NBN3 555 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 FRMD4BQ9Y2L6 1034 aa19.73■□□□□ 0.75
NPHP4-209ENST00000489180 CUTAO60888 179 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 RPL13P26373 211 aaKnown RBP19.72■□□□□ 0.75
NPHP4-209ENST00000489180 DDB1Q16531 1140 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 OGFOD1Q8N543 542 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 METTL22Q9BUU2 404 aaPredicted RBP19.72■□□□□ 0.75
NPHP4-209ENST00000489180 KCNJ14Q9UNX9 436 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 GCP02774 474 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 PSMC4P43686 418 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 TPTE2Q6XPS3 522 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 STAMQ92783 540 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 FAM170AA1A519 330 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 TRIM14Q14142 442 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 COL17A1Q9UMD9 1497 aaPredicted RBP19.72■□□□□ 0.75
NPHP4-209ENST00000489180 PLCG2P16885 1265 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 SSX2IPQ9Y2D8 614 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 NFE2L3Q9Y4A8 694 aa19.72■□□□□ 0.75
NPHP4-209ENST00000489180 hCG_1642624A0A1W2PR95 340 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 HGSO14964 777 aaPredicted RBP19.71■□□□□ 0.75
NPHP4-209ENST00000489180 ECM2O94769 699 aaPredicted RBP19.71■□□□□ 0.75
NPHP4-209ENST00000489180 RBM26Q5T8P6 1007 aaKnown RBP19.71■□□□□ 0.75
NPHP4-209ENST00000489180 SPOPO43791 374 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 TTC38Q5R3I4 469 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 SECISBP2LQ93073 1101 aaKnown RBP19.71■□□□□ 0.75
NPHP4-209ENST00000489180 ZC3H12CQ9C0D7 883 aaKnown RBP19.71■□□□□ 0.75
NPHP4-209ENST00000489180 LGR6Q9HBX8 967 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 TNFAIP3P21580 790 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 GOLGA6CA6NDK9 693 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 GOLGA6DP0CG33 693 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 CNNM4Q6P4Q7 775 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.71■□□□□ 0.75
NPHP4-209ENST00000489180 GOLGA6AQ9NYA3 693 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 NDUFAB1O14561 156 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 HARSP12081 509 aaKnown RBP19.71■□□□□ 0.75
NPHP4-209ENST00000489180 SF3A3Q12874 501 aaKnown RBP eCLIP19.71■□□□□ 0.756e-7■■■■■ 34.3
NPHP4-209ENST00000489180 PNOCQ13519 176 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 BLZF1Q9H2G9 400 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 PLEKHA4Q9H4M7 779 aa19.71■□□□□ 0.75
NPHP4-209ENST00000489180 ASIC2Q16515 512 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 AOX1Q06278 1338 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 PLBD2Q8NHP8 589 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 SLF1Q9BQI6 1058 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 TBC1D7Q9P0N9 293 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 TRAPPC8Q9Y2L5 1435 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 KRT40Q6A162 431 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 GBP6Q6ZN66 633 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 APPBP2Q92624 585 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 NKIRAS1Q9NYS0 192 aa19.7■□□□□ 0.74
NPHP4-209ENST00000489180 TAF5LO75529 589 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 KRT9P35527 623 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 POSTNQ15063 836 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 ZNF790Q6PG37 636 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 KLHL7Q8IXQ5 586 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 IMPACTQ9P2X3 320 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 DENND2AQ9ULE3 1009 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 NUP153P49790 1475 aaKnown RBP19.69■□□□□ 0.74
NPHP4-209ENST00000489180 ATP2A2P16615 1042 aaKnown RBP19.69■□□□□ 0.74
NPHP4-209ENST00000489180 INTS8Q75QN2 995 aaKnown RBP19.69■□□□□ 0.74
NPHP4-209ENST00000489180 DYMQ7RTS9 669 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 TEX11Q8IYF3 940 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 ANKRD2Q9GZV1 360 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 ME3Q16798 604 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 FCHSD1Q86WN1 690 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 MLKLQ8NB16 471 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 IP6K1Q92551 441 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 TXNDC16Q9P2K2 825 aa19.69■□□□□ 0.74
NPHP4-209ENST00000489180 BACH1O14867 736 aa19.68■□□□□ 0.74
NPHP4-209ENST00000489180 BIRC3Q13489 604 aa19.68■□□□□ 0.74
NPHP4-209ENST00000489180 GDAP1L1Q96MZ0 367 aa19.68■□□□□ 0.74
NPHP4-209ENST00000489180 OAS2P29728 719 aaKnown RBP19.68■□□□□ 0.74
NPHP4-209ENST00000489180 CEP83Q9Y592 693 aa19.68■□□□□ 0.74
NPHP4-209ENST00000489180 NDC80O14777 642 aa19.68■□□□□ 0.74
NPHP4-209ENST00000489180 ADKP55263 362 aaKnown RBP19.68■□□□□ 0.74
NPHP4-209ENST00000489180 NAA25Q14CX7 972 aa19.68■□□□□ 0.74
NPHP4-209ENST00000489180 PUM3Q15397 648 aaKnown RBP19.68■□□□□ 0.74
NPHP4-209ENST00000489180 XPO4Q9C0E2 1151 aaKnown RBP19.68■□□□□ 0.74
NPHP4-209ENST00000489180 MRPS9P82933 396 aaKnown RBP19.68■□□□□ 0.74
NPHP4-209ENST00000489180 RAB3IL1Q8TBN0 382 aa19.68■□□□□ 0.74
NPHP4-209ENST00000489180 NOX5Q96PH1 765 aa19.68■□□□□ 0.74
NPHP4-209ENST00000489180 EDC3Q96F86 508 aaKnown RBP19.68■□□□□ 0.74
NPHP4-209ENST00000489180 CHL1O00533 1208 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms