RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 F8W735 103 aaPredicted RBP7.83□□□□□ -1.16
CCL20-204ENST00000489160 LIG1P18858 919 aa7.83□□□□□ -1.16
CCL20-204ENST00000489160 COL9A2Q14055 689 aaPredicted RBP7.83□□□□□ -1.16
CCL20-204ENST00000489160 CWF19L2Q2TBE0 894 aaKnown RBP7.83□□□□□ -1.16
CCL20-204ENST00000489160 ACAD11Q709F0 780 aa7.83□□□□□ -1.16
CCL20-204ENST00000489160 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
CCL20-204ENST00000489160 NKD1Q969G9 470 aa7.83□□□□□ -1.16
CCL20-204ENST00000489160 SEC16BQ96JE7 1060 aa7.83□□□□□ -1.16
CCL20-204ENST00000489160 SPOCK3Q9BQ16 436 aa7.83□□□□□ -1.16
CCL20-204ENST00000489160 RUSC1Q9BVN2 902 aa7.83□□□□□ -1.16
CCL20-204ENST00000489160 PCDHA4Q9UN74 947 aa7.83□□□□□ -1.16
CCL20-204ENST00000489160 WISP1O95388 367 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 SLFN14P0C7P3 912 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 ATF4P18848 351 aaPredicted RBP7.82□□□□□ -1.16
CCL20-204ENST00000489160 DNAJA1P31689 397 aaKnown RBP7.82□□□□□ -1.16
CCL20-204ENST00000489160 CRKP46108 304 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 IREB2P48200 963 aaKnown RBP7.82□□□□□ -1.16
CCL20-204ENST00000489160 RPL6Q02878 288 aaKnown RBP7.82□□□□□ -1.16
CCL20-204ENST00000489160 KIAA1211Q6ZU35 1233 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 SLITRK4Q8IW52 837 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 FBXO27Q8NI29 283 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 DRC1Q96MC2 740 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 WDR18Q9BV38 432 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 TMPRSS13Q9BYE2 586 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 TANGO6Q9C0B7 1094 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 RNF208Q9H0X6 261 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 RAD18Q9NS91 495 aa7.82□□□□□ -1.16
CCL20-204ENST00000489160 TLR3O15455 904 aaKnown RBP7.81□□□□□ -1.16
CCL20-204ENST00000489160 AOC2O75106 756 aa7.81□□□□□ -1.16
CCL20-204ENST00000489160 NOS3P29474 1203 aa7.81□□□□□ -1.16
CCL20-204ENST00000489160 SEZ6Q53EL9 994 aa7.81□□□□□ -1.16
CCL20-204ENST00000489160 REC114Q7Z4M0 266 aa7.81□□□□□ -1.16
CCL20-204ENST00000489160 WDR89Q96FK6 387 aaPredicted RBP7.81□□□□□ -1.16
CCL20-204ENST00000489160 PRKAG2Q9UGJ0 569 aa7.81□□□□□ -1.16
CCL20-204ENST00000489160 SNCAIPQ9Y6H5 919 aa7.81□□□□□ -1.16
CCL20-204ENST00000489160 PROCP04070 461 aa7.8□□□□□ -1.16
CCL20-204ENST00000489160 NUTM2GQ5VZR2 741 aa7.8□□□□□ -1.16
CCL20-204ENST00000489160 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.8□□□□□ -1.16
CCL20-204ENST00000489160 HDXQ7Z353 690 aa7.8□□□□□ -1.16
CCL20-204ENST00000489160 SUGCTQ9HAC7 445 aa7.8□□□□□ -1.16
CCL20-204ENST00000489160 CYP4F12Q9HCS2 524 aa7.8□□□□□ -1.16
CCL20-204ENST00000489160 GINM1Q9NU53 330 aa7.8□□□□□ -1.16
CCL20-204ENST00000489160 USP35Q9P2H5 1018 aa7.8□□□□□ -1.16
CCL20-204ENST00000489160 EFR3BQ9Y2G0 817 aa7.8□□□□□ -1.16
CCL20-204ENST00000489160 ALX3O95076 343 aa7.79□□□□□ -1.16
CCL20-204ENST00000489160 SOX9P48436 509 aa7.79□□□□□ -1.16
CCL20-204ENST00000489160 NASPP49321 788 aaPredicted RBP7.79□□□□□ -1.16
CCL20-204ENST00000489160 ZC3H12AQ5D1E8 599 aaKnown RBP7.79□□□□□ -1.16
CCL20-204ENST00000489160 WIPI1Q5MNZ9 446 aaPredicted RBP7.79□□□□□ -1.16
CCL20-204ENST00000489160 LRFN4Q6PJG9 635 aa7.79□□□□□ -1.16
CCL20-204ENST00000489160 Q6ZS46 218 aa7.79□□□□□ -1.16
CCL20-204ENST00000489160 SMG8Q8ND04 991 aaKnown RBP7.79□□□□□ -1.16
CCL20-204ENST00000489160 ELMO3Q96BJ8 720 aa7.79□□□□□ -1.16
CCL20-204ENST00000489160 PLPPR2Q96GM1 343 aa7.79□□□□□ -1.16
CCL20-204ENST00000489160 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.79□□□□□ -1.162e-7■■□□□ 12.7
CCL20-204ENST00000489160 PCDHGC5Q9Y5F6 944 aa7.79□□□□□ -1.16
CCL20-204ENST00000489160 TACC3Q9Y6A5 838 aa7.79□□□□□ -1.16
CCL20-204ENST00000489160 GFRA2O00451 464 aa7.78□□□□□ -1.16
CCL20-204ENST00000489160 FGRP09769 529 aa7.78□□□□□ -1.16
CCL20-204ENST00000489160 ATP2B1P20020 1258 aa7.78□□□□□ -1.16
CCL20-204ENST00000489160 ZNF165P49910 485 aa7.78□□□□□ -1.16
CCL20-204ENST00000489160 ID3Q02535 119 aa7.78□□□□□ -1.16
CCL20-204ENST00000489160 INPP5AQ14642 412 aa7.78□□□□□ -1.16
CCL20-204ENST00000489160 REXO1Q8N1G1 1221 aaKnown RBP7.78□□□□□ -1.16
CCL20-204ENST00000489160 AGGF1Q8N302 714 aaeCLIP7.78□□□□□ -1.16
CCL20-204ENST00000489160 CEP41Q9BYV8 373 aa7.78□□□□□ -1.16
CCL20-204ENST00000489160 BRMS1Q9HCU9 246 aa7.78□□□□□ -1.16
CCL20-204ENST00000489160 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
CCL20-204ENST00000489160 DCDC2CA8MYV0 355 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 GLB1P16278 677 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 MCM4P33991 863 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 CDK8P49336 464 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 ERVK-24P63145 666 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 AKAP4Q5JQC9 854 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 ANKRD34AQ69YU3 496 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 FDX2Q6P4F2 183 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 CYFIP1Q7L576 1253 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 MCF2L2Q86YR7 1114 aa7.77□□□□□ -1.17
CCL20-204ENST00000489160 DZIP1LQ8IYY4 767 aaKnown RBP7.77□□□□□ -1.17
CCL20-204ENST00000489160 SSBP4Q9BWG4 385 aaPredicted RBP7.77□□□□□ -1.17
CCL20-204ENST00000489160 TMPRSS2O15393 492 aa7.76□□□□□ -1.17
CCL20-204ENST00000489160 ADH5P11766 374 aa7.76□□□□□ -1.17
CCL20-204ENST00000489160 SOX4Q06945 474 aaPredicted RBP7.76□□□□□ -1.17
CCL20-204ENST00000489160 C12orf50Q8NA57 414 aaPredicted RBP7.76□□□□□ -1.17
CCL20-204ENST00000489160 ARMC5Q96C12 935 aa7.76□□□□□ -1.17
CCL20-204ENST00000489160 MEGF10Q96KG7 1140 aa7.76□□□□□ -1.17
CCL20-204ENST00000489160 CRIM1Q9NZV1 1036 aa7.76□□□□□ -1.17
CCL20-204ENST00000489160 PPP1R1BQ9UD71 204 aaPredicted RBP7.76□□□□□ -1.17
CCL20-204ENST00000489160 PPP1R9AQ9ULJ8 1098 aa7.76□□□□□ -1.17
CCL20-204ENST00000489160 POLR3KQ9Y2Y1 108 aaPredicted RBP7.76□□□□□ -1.17
CCL20-204ENST00000489160 IGSF3O75054 1194 aa7.75□□□□□ -1.17
CCL20-204ENST00000489160 TIAF1O95411 115 aa7.75□□□□□ -1.17
CCL20-204ENST00000489160 SSBP05455 408 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCL20-204ENST00000489160 DOC2BQ14184 412 aa7.75□□□□□ -1.17
CCL20-204ENST00000489160 C12orf40Q86WS4 652 aa7.75□□□□□ -1.17
CCL20-204ENST00000489160 CPLX3Q8WVH0 158 aa7.75□□□□□ -1.17
CCL20-204ENST00000489160 UBXN4Q92575 508 aa7.75□□□□□ -1.17
CCL20-204ENST00000489160 FERD3LQ96RJ6 166 aa7.75□□□□□ -1.17
CCL20-204ENST00000489160 ATXN3LQ9H3M9 355 aa7.75□□□□□ -1.17
CCL20-204ENST00000489160 EHMT1Q9H9B1 1298 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms