RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 KCNH5Q8NCM2 988 aa10.89□□□□□ -0.67
TRAPPC12-221ENST00000489032 IRF7Q92985 503 aa10.89□□□□□ -0.67
TRAPPC12-221ENST00000489032 FAM129BQ96TA1 746 aa10.89□□□□□ -0.67
TRAPPC12-221ENST00000489032 CCDC7Q96M83 1385 aa10.89□□□□□ -0.67
TRAPPC12-221ENST00000489032 A6NHS1 94 aa10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 SASH3O75995 380 aa10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 DNAJC14Q6Y2X3 702 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 MARCH10Q8NA82 808 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 BHMTQ93088 406 aa10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 COG3Q96JB2 828 aa10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 GSX2Q9BZM3 304 aa10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 NIF3L1Q9GZT8 377 aa10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 PANK3Q9H999 370 aa10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 ELP3Q9H9T3 547 aa10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC12-221ENST00000489032 CGNL1Q0VF96 1302 aa10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 NSD3Q9BZ95 1437 aa10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 GCP02774 474 aa10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 RARAP10276 462 aa10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 YBX3P16989 372 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 CTBSQ01459 385 aa10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 TRIP4Q15650 581 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 NME9Q86XW9 330 aa10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 NLGN2Q8NFZ4 835 aa10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 KNSTRNQ9Y448 316 aa10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 USP31Q70CQ4 1352 aa10.87□□□□□ -0.67
TRAPPC12-221ENST00000489032 USP19O94966 1318 aa10.86□□□□□ -0.67
TRAPPC12-221ENST00000489032 WASHC2AQ641Q2 1341 aa10.86□□□□□ -0.67
TRAPPC12-221ENST00000489032 TARSP26639 723 aaKnown RBP10.86□□□□□ -0.67
TRAPPC12-221ENST00000489032 PRELPP51888 382 aa10.86□□□□□ -0.67
TRAPPC12-221ENST00000489032 XKR5Q6UX68 686 aa10.86□□□□□ -0.67
TRAPPC12-221ENST00000489032 TOM1L2Q6ZVM7 507 aa10.86□□□□□ -0.67
TRAPPC12-221ENST00000489032 ZNF526Q8TF50 670 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC12-221ENST00000489032 ABI2Q9NYB9 513 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC12-221ENST00000489032 PIK3C2AO00443 1686 aa10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 TREHO43280 583 aa10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 NFKB1P19838 968 aa10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 GRNP28799 593 aaKnown RBP10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 MAPK8P45983 427 aa10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 COL13A1Q5TAT6 717 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 ALKBH8Q96BT7 664 aaKnown RBP10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 SLC30A3Q99726 388 aa10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 WNK3Q9BYP7 1800 aa10.85□□□□□ -0.67
TRAPPC12-221ENST00000489032 PAPPAQ13219 1627 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 FYB1O15117 783 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 GPR182O15218 404 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 PHACTR2O75167 634 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 MAP2K3P46734 347 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 RAB44Q7Z6P3 723 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 RGS22Q8NE09 1264 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 SNX29Q8TEQ0 813 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 PMEPA1Q969W9 287 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 BCL11AQ9H165 835 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 COL24A1Q17RW2 1714 aa10.84□□□□□ -0.67
TRAPPC12-221ENST00000489032 PHF20L1A8MW92 1017 aa10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 PSAPP07602 524 aa10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 VSIG8P0DPA2 414 aa10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 FGD1P98174 961 aa10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 ATP2B2Q01814 1243 aa10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 ZNF827Q17R98 1081 aa10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 EAPPQ56P03 285 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 GPR161Q8N6U8 529 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 DNAJC5GQ8N7S2 189 aa10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 COL25A1Q9BXS0 654 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 SLIT3O75094 1523 aa10.83□□□□□ -0.68
TRAPPC12-221ENST00000489032 ADCY9O60503 1353 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 NSD2O96028 1365 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 EXOC5O00471 708 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 TNFRSF21O75509 655 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 GRIN2CQ14957 1233 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 COL19A1Q14993 1142 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 BCL2L13Q9BXK5 485 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 IGFLR1Q9H665 355 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 TMEM63CQ9P1W3 806 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 NHSQ6T4R5 1651 aa10.82□□□□□ -0.68
TRAPPC12-221ENST00000489032 KIF20BQ96Q89 1820 aa10.81□□□□□ -0.68
TRAPPC12-221ENST00000489032 QSER1Q2KHR3 1735 aa10.81□□□□□ -0.68
TRAPPC12-221ENST00000489032 CPNE3O75131 537 aaKnown RBP10.81□□□□□ -0.68
TRAPPC12-221ENST00000489032 TBC1D8BQ0IIM8 1120 aa10.81□□□□□ -0.68
TRAPPC12-221ENST00000489032 NFX1Q12986 1120 aaKnown RBP10.81□□□□□ -0.68
TRAPPC12-221ENST00000489032 SYT9Q86SS6 491 aa10.81□□□□□ -0.68
TRAPPC12-221ENST00000489032 NPAS4Q8IUM7 802 aa10.81□□□□□ -0.68
TRAPPC12-221ENST00000489032 USP54Q70EL1 1684 aa10.81□□□□□ -0.68
TRAPPC12-221ENST00000489032 CES1P23141 567 aa10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 DSC3Q14574 896 aa10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 ZNF468Q5VIY5 522 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 MORC1Q86VD1 984 aa10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 ARHGEF25Q86VW2 580 aa10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 FOXD4L4Q8WXT5 416 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 DNAJC25Q9H1X3 360 aa10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 AVENQ9NQS1 362 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 FOXD3Q9UJU5 478 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 WDR17Q8IZU2 1322 aa10.8□□□□□ -0.68
TRAPPC12-221ENST00000489032 MMP20O60882 483 aa10.79□□□□□ -0.68
TRAPPC12-221ENST00000489032 AMPHP49418 695 aa10.79□□□□□ -0.68
TRAPPC12-221ENST00000489032 PLAURQ03405 335 aa10.79□□□□□ -0.68
TRAPPC12-221ENST00000489032 ORC1Q13415 861 aa10.79□□□□□ -0.68
TRAPPC12-221ENST00000489032 GAS6Q14393 721 aa10.79□□□□□ -0.68
TRAPPC12-221ENST00000489032 PCSK7Q16549 785 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms