RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 FOSL1P15407 271 aa5.94□□□□□ -1.46
KDM3A-213ENST00000488971 EXOSC6Q5RKV6 272 aaKnown RBP5.94□□□□□ -1.46
KDM3A-213ENST00000488971 SOGA3Q5TF21 947 aa5.94□□□□□ -1.46
KDM3A-213ENST00000488971 NXPE4Q6UWF7 544 aa5.94□□□□□ -1.46
KDM3A-213ENST00000488971 VPS37DQ86XT2 251 aa5.94□□□□□ -1.46
KDM3A-213ENST00000488971 FBLIM1Q8WUP2 373 aa5.94□□□□□ -1.46
KDM3A-213ENST00000488971 YIPF2Q9BWQ6 316 aa5.94□□□□□ -1.46
KDM3A-213ENST00000488971 BCO2Q9BYV7 579 aa5.94□□□□□ -1.46
KDM3A-213ENST00000488971 SOX17Q9H6I2 414 aaPredicted RBP5.94□□□□□ -1.46
KDM3A-213ENST00000488971 SUGCTQ9HAC7 445 aa5.94□□□□□ -1.46
KDM3A-213ENST00000488971 TIAF1O95411 115 aa5.93□□□□□ -1.46
KDM3A-213ENST00000488971 DLGAP3O95886 979 aa5.93□□□□□ -1.46
KDM3A-213ENST00000488971 ESRRAP11474 423 aaPredicted RBP5.93□□□□□ -1.46
KDM3A-213ENST00000488971 CPSF6Q16630 551 aaKnown RBP eCLIP5.93□□□□□ -1.46
KDM3A-213ENST00000488971 CDPF1Q6NVV7 123 aa5.93□□□□□ -1.46
KDM3A-213ENST00000488971 MCF2L2Q86YR7 1114 aa5.93□□□□□ -1.46
KDM3A-213ENST00000488971 ABI1Q8IZP0 508 aa5.93□□□□□ -1.46
KDM3A-213ENST00000488971 METTL22Q9BUU2 404 aaPredicted RBP5.93□□□□□ -1.46
KDM3A-213ENST00000488971 NOC4LQ9BVI4 516 aaKnown RBP5.93□□□□□ -1.46
KDM3A-213ENST00000488971 HIRIP3Q9BW71 556 aaPredicted RBP5.93□□□□□ -1.46
KDM3A-213ENST00000488971 EIF4EBP3O60516 100 aaPredicted RBP5.92□□□□□ -1.46
KDM3A-213ENST00000488971 ATF4P18848 351 aaPredicted RBP5.92□□□□□ -1.46
KDM3A-213ENST00000488971 GSTT1P30711 240 aa5.92□□□□□ -1.46
KDM3A-213ENST00000488971 SOX4Q06945 474 aaPredicted RBP5.92□□□□□ -1.46
KDM3A-213ENST00000488971 GRM2Q14416 872 aa5.92□□□□□ -1.46
KDM3A-213ENST00000488971 CCDC144BQ3MJ40 725 aa5.92□□□□□ -1.46
KDM3A-213ENST00000488971 TP53INP2Q8IXH6 220 aa5.92□□□□□ -1.46
KDM3A-213ENST00000488971 RASGRP4Q8TDF6 673 aa5.92□□□□□ -1.46
KDM3A-213ENST00000488971 ANKRD24Q8TF21 1146 aa5.92□□□□□ -1.46
KDM3A-213ENST00000488971 TBC1D32Q96NH3 1257 aa5.92□□□□□ -1.46
KDM3A-213ENST00000488971 BHLHE41Q9C0J9 482 aaPredicted RBP5.92□□□□□ -1.46
KDM3A-213ENST00000488971 LATS2Q9NRM7 1088 aa5.92□□□□□ -1.46
KDM3A-213ENST00000488971 CYP26A1O43174 497 aa5.91□□□□□ -1.46
KDM3A-213ENST00000488971 GADD45BO75293 160 aaPredicted RBP5.91□□□□□ -1.46
KDM3A-213ENST00000488971 POLR3DP05423 398 aaPredicted RBP5.91□□□□□ -1.46
KDM3A-213ENST00000488971 CDK11BP21127 795 aaKnown RBP5.91□□□□□ -1.46
KDM3A-213ENST00000488971 PAK2Q13177 524 aa5.91□□□□□ -1.46
KDM3A-213ENST00000488971 MSMPQ1L6U9 139 aa5.91□□□□□ -1.46
KDM3A-213ENST00000488971 KIAA0319Q5VV43 1072 aa5.91□□□□□ -1.46
KDM3A-213ENST00000488971 SHISA5Q8N114 240 aa5.91□□□□□ -1.46
KDM3A-213ENST00000488971 C3orf58Q8NDZ4 430 aa5.91□□□□□ -1.46
KDM3A-213ENST00000488971 GPRASP2Q96D09 838 aa5.91□□□□□ -1.46
KDM3A-213ENST00000488971 RSRP1Q9BUV0 290 aa5.91□□□□□ -1.46
KDM3A-213ENST00000488971 CCDC39Q9UFE4 941 aa5.91□□□□□ -1.46
KDM3A-213ENST00000488971 CDK11AQ9UQ88 783 aaPredicted RBP5.91□□□□□ -1.46
KDM3A-213ENST00000488971 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
KDM3A-213ENST00000488971 METTL12A8MUP2 240 aa5.9□□□□□ -1.46
KDM3A-213ENST00000488971 PRPF40BQ6NWY9 871 aaKnown RBP5.9□□□□□ -1.46
KDM3A-213ENST00000488971 VSIG10LQ86VR7 867 aa5.9□□□□□ -1.46
KDM3A-213ENST00000488971 C2CD4AQ8NCU7 369 aaPredicted RBP5.9□□□□□ -1.46
KDM3A-213ENST00000488971 GLIS3Q8NEA6 775 aa5.9□□□□□ -1.46
KDM3A-213ENST00000488971 FBXL18Q96ME1 805 aa5.9□□□□□ -1.46
KDM3A-213ENST00000488971 COPRSQ9NQ92 184 aa5.9□□□□□ -1.46
KDM3A-213ENST00000488971 KBTBD4Q9NVX7 518 aa5.9□□□□□ -1.46
KDM3A-213ENST00000488971 TRAK1Q9UPV9 953 aa5.9□□□□□ -1.46
KDM3A-213ENST00000488971 TMA7Q9Y2S6 64 aaKnown RBP5.9□□□□□ -1.46
KDM3A-213ENST00000488971 TLDC2A0PJX2 215 aa5.89□□□□□ -1.47
KDM3A-213ENST00000488971 STK10O94804 968 aaKnown RBP5.89□□□□□ -1.47
KDM3A-213ENST00000488971 NCLP19338 710 aaKnown RBP5.89□□□□□ -1.47
KDM3A-213ENST00000488971 ADMP35318 185 aa5.89□□□□□ -1.47
KDM3A-213ENST00000488971 PWP1Q13610 501 aa5.89□□□□□ -1.47
KDM3A-213ENST00000488971 HP1BP3Q5SSJ5 553 aaPredicted RBP5.89□□□□□ -1.47
KDM3A-213ENST00000488971 PEAR1Q5VY43 1037 aaPredicted RBP5.89□□□□□ -1.47
KDM3A-213ENST00000488971 DUSP27Q5VZP5 1158 aa5.89□□□□□ -1.47
KDM3A-213ENST00000488971 ZAR1Q86SH2 424 aa5.89□□□□□ -1.47
KDM3A-213ENST00000488971 SEC16BQ96JE7 1060 aa5.89□□□□□ -1.47
KDM3A-213ENST00000488971 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.89□□□□□ -1.475e-13■■■■□ 25
KDM3A-213ENST00000488971 RAD18Q9NS91 495 aa5.89□□□□□ -1.47
KDM3A-213ENST00000488971 BSDC1Q9NW68 430 aaPredicted RBP5.89□□□□□ -1.47
KDM3A-213ENST00000488971 PPP4R2Q9NY27 417 aa5.89□□□□□ -1.47
KDM3A-213ENST00000488971 PPM1HQ9ULR3 514 aa5.89□□□□□ -1.47
KDM3A-213ENST00000488971 A0A096LPE4 126 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 A0A1W2PP55 124 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 A0A1W2PPZ6 126 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 FAM170BA6NMN3 283 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 PRNPP04156 253 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 CYP11A1P05108 521 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 NFICP08651 508 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 ADH5P11766 374 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 XRCC5P13010 732 aaKnown RBP5.88□□□□□ -1.47
KDM3A-213ENST00000488971 RAB6AP20340 208 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 MAOBP27338 520 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 PCDH1Q08174 1060 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 MAP7Q14244 749 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 AKAP4Q5JQC9 854 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 DYMQ7RTS9 669 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 FLCNQ8NFG4 579 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 PMFBP1Q8TBY8 1022 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 OSBPL2Q9H1P3 480 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 LRRC4CQ9HCJ2 640 aa5.88□□□□□ -1.47
KDM3A-213ENST00000488971 TTF2Q9UNY4 1162 aaKnown RBP5.88□□□□□ -1.47
KDM3A-213ENST00000488971 CYP27A1Q02318 531 aa5.87□□□□□ -1.47
KDM3A-213ENST00000488971 POU4F3Q15319 338 aa5.87□□□□□ -1.47
KDM3A-213ENST00000488971 NBPF6Q5VWK0 638 aa5.87□□□□□ -1.47
KDM3A-213ENST00000488971 KIAA0825Q8IV33 1275 aa5.87□□□□□ -1.47
KDM3A-213ENST00000488971 DDX54Q8TDD1 881 aaKnown RBP5.87□□□□□ -1.47
KDM3A-213ENST00000488971 EZH1Q92800 747 aaPredicted RBP5.87□□□□□ -1.47
KDM3A-213ENST00000488971 ASIC4Q96FT7 647 aa5.87□□□□□ -1.47
KDM3A-213ENST00000488971 NBPF4Q96M43 638 aa5.87□□□□□ -1.47
KDM3A-213ENST00000488971 SPON2Q9BUD6 331 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms