RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 BTDP43251 543 aa22.79■■□□□ 1.24
HDAC6-231ENST00000488905 PRMT2P55345 433 aa22.79■■□□□ 1.24
HDAC6-231ENST00000488905 SCYL3Q8IZE3 742 aa22.79■■□□□ 1.24
HDAC6-231ENST00000488905 SH3TC2Q8TF17 1288 aa22.79■■□□□ 1.24
HDAC6-231ENST00000488905 FAM163AQ96GL9 167 aaPredicted RBP22.79■■□□□ 1.24
HDAC6-231ENST00000488905 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.79■■□□□ 1.24
HDAC6-231ENST00000488905 SH3BP5LQ7L8J4 393 aa22.78■■□□□ 1.24
HDAC6-231ENST00000488905 ZSCAN29Q8IWY8 852 aaPredicted RBP22.78■■□□□ 1.24
HDAC6-231ENST00000488905 GCC1Q96CN9 775 aa22.78■■□□□ 1.24
HDAC6-231ENST00000488905 PARK7Q99497 189 aaKnown RBP22.78■■□□□ 1.24
HDAC6-231ENST00000488905 DDX4Q9NQI0 724 aaKnown RBP22.78■■□□□ 1.24
HDAC6-231ENST00000488905 CDK5RAP2Q96SN8 1893 aa22.77■■□□□ 1.24
HDAC6-231ENST00000488905 CXCL11O14625 94 aa22.77■■□□□ 1.24
HDAC6-231ENST00000488905 IPO8O15397 1037 aaKnown RBP22.77■■□□□ 1.24
HDAC6-231ENST00000488905 ECM2O94769 699 aaPredicted RBP22.77■■□□□ 1.24
HDAC6-231ENST00000488905 CTGFP29279 349 aa22.77■■□□□ 1.24
HDAC6-231ENST00000488905 PICALMQ13492 652 aa22.77■■□□□ 1.24
HDAC6-231ENST00000488905 SLC4A8Q2Y0W8 1093 aa22.77■■□□□ 1.24
HDAC6-231ENST00000488905 ATF7IPQ6VMQ6 1270 aa22.77■■□□□ 1.24
HDAC6-231ENST00000488905 TRIM47Q96LD4 638 aa22.77■■□□□ 1.24
HDAC6-231ENST00000488905 PICK1Q9NRD5 415 aa22.77■■□□□ 1.24
HDAC6-231ENST00000488905 DDTLA6NHG4 134 aaPredicted RBP22.76■■□□□ 1.23
HDAC6-231ENST00000488905 MYCP01106 439 aaPredicted RBP22.76■■□□□ 1.23
HDAC6-231ENST00000488905 GNAI2P04899 355 aa22.76■■□□□ 1.23
HDAC6-231ENST00000488905 PSMC4P43686 418 aa22.76■■□□□ 1.23
HDAC6-231ENST00000488905 MECOMQ03112 1051 aa22.76■■□□□ 1.23
HDAC6-231ENST00000488905 ERICH6Q7L0X2 663 aa22.76■■□□□ 1.23
HDAC6-231ENST00000488905 NEUROD6Q96NK8 337 aa22.76■■□□□ 1.23
HDAC6-231ENST00000488905 TNNQ9UQP3 1299 aa22.76■■□□□ 1.23
HDAC6-231ENST00000488905 LOC285556D6RIA3 1793 aa22.76■■□□□ 1.23
HDAC6-231ENST00000488905 FOCADQ5VW36 1801 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 MYO5AQ9Y4I1 1855 aaKnown RBP22.75■■□□□ 1.23
HDAC6-231ENST00000488905 A0A0G2JLL6 359 aaPredicted RBP22.75■■□□□ 1.23
HDAC6-231ENST00000488905 PTPRAP18433 802 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 MAP3K10Q02779 954 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 GPAT2Q6NUI2 795 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 PI16Q6UXB8 463 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 PRRT2Q7Z6L0 340 aaPredicted RBP22.75■■□□□ 1.23
HDAC6-231ENST00000488905 ZNF384Q8TF68 577 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 FRAT1Q92837 279 aaPredicted RBP22.75■■□□□ 1.23
HDAC6-231ENST00000488905 HMG20BQ9P0W2 317 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 PCDH10Q9P2E7 1040 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 SRRDQ9UH36 339 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 ZHX2Q9Y6X8 837 aa22.75■■□□□ 1.23
HDAC6-231ENST00000488905 COL2A1P02458 1487 aaPredicted RBP22.74■■□□□ 1.23
HDAC6-231ENST00000488905 GPR75-ASB3A0A0A6YYF3 556 aa22.74■■□□□ 1.23
HDAC6-231ENST00000488905 PNMA6EA0A0J9YXQ4 647 aa22.74■■□□□ 1.23
HDAC6-231ENST00000488905 BCAR3O75815 825 aa22.74■■□□□ 1.23
HDAC6-231ENST00000488905 OSBPP22059 807 aa22.74■■□□□ 1.23
HDAC6-231ENST00000488905 ARID4AP29374 1257 aaPredicted RBP22.74■■□□□ 1.23
HDAC6-231ENST00000488905 RHBDL3P58872 404 aa22.74■■□□□ 1.23
HDAC6-231ENST00000488905 SIPA1L1O43166 1804 aa22.73■■□□□ 1.23
HDAC6-231ENST00000488905 SLURP2P0DP57 97 aa22.73■■□□□ 1.23
HDAC6-231ENST00000488905 CYP2C8P10632 490 aa22.73■■□□□ 1.23
HDAC6-231ENST00000488905 BCRP11274 1271 aa22.73■■□□□ 1.23
HDAC6-231ENST00000488905 GORABQ5T7V8 394 aa22.73■■□□□ 1.23
HDAC6-231ENST00000488905 FASTKD5Q7L8L6 764 aaKnown RBP22.73■■□□□ 1.23
HDAC6-231ENST00000488905 SPATA5Q8NB90 893 aa22.73■■□□□ 1.23
HDAC6-231ENST00000488905 CLUAP1Q96AJ1 413 aa22.73■■□□□ 1.23
HDAC6-231ENST00000488905 AFG3L2Q9Y4W6 797 aa22.73■■□□□ 1.23
HDAC6-231ENST00000488905 DOCK3Q8IZD9 2030 aa22.72■■□□□ 1.23
HDAC6-231ENST00000488905 CTNND1O60716 968 aaKnown RBP22.72■■□□□ 1.23
HDAC6-231ENST00000488905 FMNL1O95466 1100 aaPredicted RBP22.72■■□□□ 1.23
HDAC6-231ENST00000488905 HOXD10P28358 340 aa22.72■■□□□ 1.23
HDAC6-231ENST00000488905 NSUN4Q96CB9 384 aaKnown RBP22.72■■□□□ 1.23
HDAC6-231ENST00000488905 MYPNQ86TC9 1320 aa22.72■■□□□ 1.23
HDAC6-231ENST00000488905 NPM3O75607 178 aaKnown RBP22.71■■□□□ 1.23
HDAC6-231ENST00000488905 GSTO1P78417 241 aa22.71■■□□□ 1.23
HDAC6-231ENST00000488905 G3BP1Q13283 466 aaKnown RBP eCLIP22.71■■□□□ 1.23
HDAC6-231ENST00000488905 GADL1Q6ZQY3 521 aa22.71■■□□□ 1.23
HDAC6-231ENST00000488905 RAET1EQ8TD07 263 aa22.71■■□□□ 1.23
HDAC6-231ENST00000488905 SLC45A1Q9Y2W3 748 aa22.71■■□□□ 1.23
HDAC6-231ENST00000488905 MCAMP43121 646 aa22.7■■□□□ 1.22
HDAC6-231ENST00000488905 TBC1D9Q6ZT07 1266 aa22.7■■□□□ 1.22
HDAC6-231ENST00000488905 RAI14Q9P0K7 980 aa22.7■■□□□ 1.22
HDAC6-231ENST00000488905 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.7■■□□□ 1.22
HDAC6-231ENST00000488905 TBC1D12O60347 775 aa22.69■■□□□ 1.22
HDAC6-231ENST00000488905 MAP4K4O95819 1239 aaPredicted RBP22.69■■□□□ 1.22
HDAC6-231ENST00000488905 LDHCP07864 332 aa22.69■■□□□ 1.22
HDAC6-231ENST00000488905 GRK4P32298 578 aa22.69■■□□□ 1.22
HDAC6-231ENST00000488905 FCGRTP55899 365 aa22.69■■□□□ 1.22
HDAC6-231ENST00000488905 MTFR1Q15390 333 aa22.69■■□□□ 1.22
HDAC6-231ENST00000488905 TMEM57Q8N5G2 664 aa22.69■■□□□ 1.22
HDAC6-231ENST00000488905 TRIM75PA6NK02 468 aa22.68■■□□□ 1.22
HDAC6-231ENST00000488905 FAM196BA6NMK8 535 aa22.68■■□□□ 1.22
HDAC6-231ENST00000488905 PRKCZQ05513 592 aa22.68■■□□□ 1.22
HDAC6-231ENST00000488905 SHISA4Q96DD7 197 aa22.68■■□□□ 1.22
HDAC6-231ENST00000488905 OSBPL5Q9H0X9 879 aaPredicted RBP22.68■■□□□ 1.22
HDAC6-231ENST00000488905 UQCRFS1P1P0C7P4 283 aa22.67■■□□□ 1.22
HDAC6-231ENST00000488905 HABP4Q5JVS0 413 aaKnown RBP22.67■■□□□ 1.22
HDAC6-231ENST00000488905 ZKSCAN2Q63HK3 967 aa22.67■■□□□ 1.22
HDAC6-231ENST00000488905 CCDC84Q86UT8 332 aaPredicted RBP22.67■■□□□ 1.22
HDAC6-231ENST00000488905 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.67■■□□□ 1.22
HDAC6-231ENST00000488905 POLA2Q14181 598 aa22.66■■□□□ 1.22
HDAC6-231ENST00000488905 SMCR8Q8TEV9 937 aaPredicted RBP22.66■■□□□ 1.22
HDAC6-231ENST00000488905 LRP2BPQ9P2M1 347 aa22.66■■□□□ 1.22
HDAC6-231ENST00000488905 AGTPBP1Q9UPW5 1226 aa22.66■■□□□ 1.22
HDAC6-231ENST00000488905 RANBP2P49792 3224 aaKnown RBP22.66■■□□□ 1.22
HDAC6-231ENST00000488905 TEX11Q8IYF3 940 aa22.65■■□□□ 1.22
HDAC6-231ENST00000488905 SLAIN1Q8ND83 568 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms