RNA–Protein interactions for RNA: ENST00000488687.5

PSME4-209, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 3,073 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-209ENST00000488687 FERMT3Q86UX7 667 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 LCORLQ8N3X6 602 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 BMP2KQ9NSY1 1161 aaPredicted RBP7.23□□□□□ -1.25
PSME4-209ENST00000488687 DOCK2Q92608 1830 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 KLF18A0A0U1RQI7 1052 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 CPLX1O14810 134 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 PDIA3P30101 505 aaKnown RBP7.23□□□□□ -1.25
PSME4-209ENST00000488687 HMGN5P82970 282 aaKnown RBP7.23□□□□□ -1.25
PSME4-209ENST00000488687 ALX1Q15699 326 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 FBXO33Q7Z6M2 555 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 DHX37Q8IY37 1157 aaKnown RBP7.23□□□□□ -1.25
PSME4-209ENST00000488687 MB21D2Q8IYB1 491 aaPredicted RBP7.23□□□□□ -1.25
PSME4-209ENST00000488687 FAM43AQ8N2R8 423 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 PDCD7Q8N8D1 485 aaKnown RBP7.23□□□□□ -1.25
PSME4-209ENST00000488687 GPT2Q8TD30 523 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 SYAP1Q96A49 352 aaPredicted RBP7.23□□□□□ -1.25
PSME4-209ENST00000488687 ISY1Q9ULR0 285 aaKnown RBP7.23□□□□□ -1.25
PSME4-209ENST00000488687 CHD4Q14839 1912 aa7.23□□□□□ -1.25
PSME4-209ENST00000488687 UBR3Q6ZT12 1888 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 GOLGA8BA8MQT2 603 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 PRKAB2O43741 272 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 KLRK1P26718 216 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 FOXK1P85037 733 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 DNM1Q05193 864 aaKnown RBP7.22□□□□□ -1.25
PSME4-209ENST00000488687 RRP12Q5JTH9 1297 aaKnown RBP7.22□□□□□ -1.25
PSME4-209ENST00000488687 NFXL1Q6ZNB6 911 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 MFSD6Q6ZSS7 791 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 CDC37L1Q7L3B6 337 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 TBC1D10CQ8IV04 446 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 MICALL2Q8IY33 904 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 STK11IPQ8N1F8 1099 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 AGXT2Q9BYV1 514 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 CNNM2Q9H8M5 875 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 NCOA5Q9HCD5 579 aaKnown RBP7.22□□□□□ -1.25
PSME4-209ENST00000488687 LEMD3Q9Y2U8 911 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 XDHP47989 1333 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 PNPLA7Q6ZV29 1317 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 A0A1B0GUL6 1792 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 PTPDC1A2A3K4 754 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 GSG1L2A8MUP6 293 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 MINDY4BA8MYZ0 360 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 B4E1Z4 1266 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 KIF3CO14782 793 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 FOSBP53539 338 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 KRT85P78386 507 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 CTDSPL2Q05D32 466 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 KRT23Q9C075 422 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 NSFL1CQ9UNZ2 370 aaKnown RBP7.22□□□□□ -1.25
PSME4-209ENST00000488687 ZMYM6O95789 1325 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 WDR19Q8NEZ3 1342 aa7.22□□□□□ -1.25
PSME4-209ENST00000488687 TNRC6CQ9HCJ0 1690 aaKnown RBP7.22□□□□□ -1.25
PSME4-209ENST00000488687 PLSCR1O15162 318 aa7.21□□□□□ -1.25
PSME4-209ENST00000488687 MRE11P49959 708 aa7.21□□□□□ -1.25
PSME4-209ENST00000488687 ZSCAN23Q3MJ62 389 aa7.21□□□□□ -1.25
PSME4-209ENST00000488687 SPTY2D1Q68D10 685 aaPredicted RBP7.21□□□□□ -1.25
PSME4-209ENST00000488687 ZNF804AQ7Z570 1209 aa7.21□□□□□ -1.25
PSME4-209ENST00000488687 FBXL16Q8N461 479 aa7.21□□□□□ -1.25
PSME4-209ENST00000488687 CCDC102AQ96A19 550 aa7.21□□□□□ -1.25
PSME4-209ENST00000488687 EPB41L4AQ9HCS5 686 aaPredicted RBP7.21□□□□□ -1.25
PSME4-209ENST00000488687 RBM27Q9P2N5 1060 aaKnown RBP7.21□□□□□ -1.25
PSME4-209ENST00000488687 ANGEL1Q9UNK9 670 aaKnown RBP7.21□□□□□ -1.25
PSME4-209ENST00000488687 JAG2Q9Y219 1238 aa7.21□□□□□ -1.25
PSME4-209ENST00000488687 ERICH2A1L162 156 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 ZBTB7AO95365 584 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 SART3Q15020 963 aaKnown RBP7.21□□□□□ -1.26
PSME4-209ENST00000488687 AKNAD1Q5T1N1 836 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 SYNE3Q6ZMZ3 975 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 DZIP1Q86YF9 867 aaKnown RBP7.21□□□□□ -1.26
PSME4-209ENST00000488687 PARP9Q8IXQ6 854 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 NSUN7Q8NE18 718 aaKnown RBP7.21□□□□□ -1.26
PSME4-209ENST00000488687 SMARCC2Q8TAQ2 1214 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 SDR42E1Q8WUS8 393 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 NBPF3Q9H094 633 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 RNF41Q9H4P4 317 aaPredicted RBP7.21□□□□□ -1.26
PSME4-209ENST00000488687 FSD2A1L4K1 749 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 GOLGA6L4A6NEF3 574 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 IFIT3O14879 490 aaKnown RBP7.21□□□□□ -1.26
PSME4-209ENST00000488687 PPFIA3O75145 1194 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 KDM4AO75164 1064 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 GADD45BO75293 160 aaPredicted RBP7.21□□□□□ -1.26
PSME4-209ENST00000488687 ANTXR2P58335 489 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 TMEM67Q5HYA8 995 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 CPLX2Q6PUV4 134 aaKnown RBP7.21□□□□□ -1.26
PSME4-209ENST00000488687 CYB5R4Q7L1T6 521 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 ADGRA1Q86SQ6 560 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 RAB11FIP4Q86YS3 637 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 NLGN1Q8N2Q7 840 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 TMEM87BQ96K49 555 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 GRPEL1Q9HAV7 217 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 NEDD4P46934 1319 aa7.21□□□□□ -1.26
PSME4-209ENST00000488687 COL1A1P02452 1464 aaPredicted RBP7.2□□□□□ -1.26
PSME4-209ENST00000488687 MYH13Q9UKX3 1938 aa7.2□□□□□ -1.26
PSME4-209ENST00000488687 CCDC69A6NI79 296 aa7.2□□□□□ -1.26
PSME4-209ENST00000488687 BBOX1O75936 387 aa7.2□□□□□ -1.26
PSME4-209ENST00000488687 UFL1O94874 794 aa7.2□□□□□ -1.26
PSME4-209ENST00000488687 OSBPP22059 807 aa7.2□□□□□ -1.26
PSME4-209ENST00000488687 METAP2P50579 478 aaKnown RBP eCLIP7.2□□□□□ -1.26
PSME4-209ENST00000488687 UBE2HP62256 183 aa7.2□□□□□ -1.26
PSME4-209ENST00000488687 DYNLL1P63167 89 aaKnown RBP7.2□□□□□ -1.26
PSME4-209ENST00000488687 MECOMQ03112 1051 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms