RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 SLFN5Q08AF3 891 aa15.29■□□□□ 0.04
TTC3-221ENST00000488522 TCP10Q12799 353 aa15.29■□□□□ 0.04
TTC3-221ENST00000488522 MTFR1Q15390 333 aa15.29■□□□□ 0.04
TTC3-221ENST00000488522 PRRT2Q7Z6L0 340 aaPredicted RBP15.29■□□□□ 0.04
TTC3-221ENST00000488522 FAM163AQ96GL9 167 aaPredicted RBP15.29■□□□□ 0.04
TTC3-221ENST00000488522 GNL3LQ9NVN8 582 aaKnown RBP15.29■□□□□ 0.04
TTC3-221ENST00000488522 DENND2AQ9ULE3 1009 aa15.29■□□□□ 0.04
TTC3-221ENST00000488522 MYPNQ86TC9 1320 aa15.28■□□□□ 0.04
TTC3-221ENST00000488522 H0YGN5 161 aa15.28■□□□□ 0.04
TTC3-221ENST00000488522 CAPN2P17655 700 aa15.28■□□□□ 0.04
TTC3-221ENST00000488522 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
TTC3-221ENST00000488522 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
TTC3-221ENST00000488522 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
TTC3-221ENST00000488522 CEP126Q9P2H0 1117 aa15.28■□□□□ 0.04
TTC3-221ENST00000488522 FMNL1O95466 1100 aaPredicted RBP15.27■□□□□ 0.04
TTC3-221ENST00000488522 IL15P40933 162 aaPredicted RBP15.27■□□□□ 0.04
TTC3-221ENST00000488522 PHKA1P46020 1223 aa15.27■□□□□ 0.04
TTC3-221ENST00000488522 ZFPM1Q8IX07 1006 aa15.27■□□□□ 0.04
TTC3-221ENST00000488522 TRMT2AQ8IZ69 625 aaKnown RBP15.27■□□□□ 0.04
TTC3-221ENST00000488522 ZGPATQ8N5A5 531 aaKnown RBP15.27■□□□□ 0.04
TTC3-221ENST00000488522 SLAIN1Q8ND83 568 aa15.27■□□□□ 0.04
TTC3-221ENST00000488522 RAET1EQ8TD07 263 aa15.27■□□□□ 0.04
TTC3-221ENST00000488522 PRO3102Q9H379 93 aa15.27■□□□□ 0.04
TTC3-221ENST00000488522 COPRSQ9NQ92 184 aa15.27■□□□□ 0.04
TTC3-221ENST00000488522 AFG3L2Q9Y4W6 797 aa15.27■□□□□ 0.04
TTC3-221ENST00000488522 COL2A1P02458 1487 aaPredicted RBP15.27■□□□□ 0.03
TTC3-221ENST00000488522 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
TTC3-221ENST00000488522 UBTFL1P0CB47 393 aaPredicted RBP15.26■□□□□ 0.03
TTC3-221ENST00000488522 PTPRAP18433 802 aa15.26■□□□□ 0.03
TTC3-221ENST00000488522 RGS3P49796 1198 aa15.26■□□□□ 0.03
TTC3-221ENST00000488522 FCGRTP55899 365 aa15.26■□□□□ 0.03
TTC3-221ENST00000488522 PRKCZQ05513 592 aa15.26■□□□□ 0.03
TTC3-221ENST00000488522 SH3BP5LQ7L8J4 393 aa15.26■□□□□ 0.03
TTC3-221ENST00000488522 FASTKD5Q7L8L6 764 aaKnown RBP15.26■□□□□ 0.03
TTC3-221ENST00000488522 MYCP01106 439 aaPredicted RBP15.25■□□□□ 0.03
TTC3-221ENST00000488522 CYP2C8P10632 490 aa15.25■□□□□ 0.03
TTC3-221ENST00000488522 CCL5P13501 91 aa15.25■□□□□ 0.03
TTC3-221ENST00000488522 UBXN2AP68543 259 aa15.25■□□□□ 0.03
TTC3-221ENST00000488522 HNRNPUQ00839 825 aaKnown RBP eCLIP15.25■□□□□ 0.03
TTC3-221ENST00000488522 IRF5Q13568 498 aa15.25■□□□□ 0.03
TTC3-221ENST00000488522 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
TTC3-221ENST00000488522 HDAC5Q9UQL6 1122 aa15.25■□□□□ 0.03
TTC3-221ENST00000488522 LOC285556D6RIA3 1793 aa15.25■□□□□ 0.03
TTC3-221ENST00000488522 RASGRF1Q13972 1273 aa15.24■□□□□ 0.03
TTC3-221ENST00000488522 SLF2Q8IX21 1173 aa15.24■□□□□ 0.03
TTC3-221ENST00000488522 PXYLP1Q8TE99 480 aa15.24■□□□□ 0.03
TTC3-221ENST00000488522 HTATIP2Q9BUP3 242 aa15.24■□□□□ 0.03
TTC3-221ENST00000488522 SIL1Q9H173 461 aa15.24■□□□□ 0.03
TTC3-221ENST00000488522 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
TTC3-221ENST00000488522 ZHX2Q9Y6X8 837 aa15.24■□□□□ 0.03
TTC3-221ENST00000488522 TBC1D12O60347 775 aa15.23■□□□□ 0.03
TTC3-221ENST00000488522 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
TTC3-221ENST00000488522 MTX1Q13505 466 aa15.23■□□□□ 0.03
TTC3-221ENST00000488522 RNF208Q9H0X6 261 aa15.23■□□□□ 0.03
TTC3-221ENST00000488522 DDX4Q9NQI0 724 aaKnown RBP15.23■□□□□ 0.03
TTC3-221ENST00000488522 PICK1Q9NRD5 415 aa15.23■□□□□ 0.03
TTC3-221ENST00000488522 MROH7-TTC4A0A0A0MT08 1334 aa15.22■□□□□ 0.03
TTC3-221ENST00000488522 DDTLA6NHG4 134 aaPredicted RBP15.22■□□□□ 0.03
TTC3-221ENST00000488522 MAP4K4O95819 1239 aaPredicted RBP15.22■□□□□ 0.03
TTC3-221ENST00000488522 ADORA1P30542 326 aa15.22■□□□□ 0.03
TTC3-221ENST00000488522 RHBDL3P58872 404 aa15.22■□□□□ 0.03
TTC3-221ENST00000488522 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
TTC3-221ENST00000488522 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
TTC3-221ENST00000488522 API5Q9BZZ5 524 aaKnown RBP15.22■□□□□ 0.03
TTC3-221ENST00000488522 GABRQQ9UN88 632 aa15.22■□□□□ 0.03
TTC3-221ENST00000488522 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
TTC3-221ENST00000488522 PA2G4Q9UQ80 394 aaKnown RBP15.22■□□□□ 0.03
TTC3-221ENST00000488522 LRRFIP2Q9Y608 721 aaKnown RBP15.22■□□□□ 0.03
TTC3-221ENST00000488522 DOCK3Q8IZD9 2030 aa15.22■□□□□ 0.03
TTC3-221ENST00000488522 GPR75-ASB3A0A0A6YYF3 556 aa15.21■□□□□ 0.03
TTC3-221ENST00000488522 SGPL1O95470 568 aa15.21■□□□□ 0.03
TTC3-221ENST00000488522 BTDP43251 543 aa15.21■□□□□ 0.03
TTC3-221ENST00000488522 SPTY2D1Q68D10 685 aaPredicted RBP15.21■□□□□ 0.03
TTC3-221ENST00000488522 DZIP1Q86YF9 867 aaKnown RBP15.21■□□□□ 0.03
TTC3-221ENST00000488522 ZNF384Q8TF68 577 aa15.21■□□□□ 0.03
TTC3-221ENST00000488522 UNC93B1Q9H1C4 597 aa15.21■□□□□ 0.03
TTC3-221ENST00000488522 PAK6Q9NQU5 681 aaPredicted RBP15.21■□□□□ 0.03
TTC3-221ENST00000488522 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.03
TTC3-221ENST00000488522 A0A1W2PPC1 479 aa15.2■□□□□ 0.02
TTC3-221ENST00000488522 ADCY3O60266 1144 aa15.2■□□□□ 0.02
TTC3-221ENST00000488522 FARP2O94887 1054 aaPredicted RBP15.2■□□□□ 0.02
TTC3-221ENST00000488522 FLT3LGP49771 235 aa15.2■□□□□ 0.02
TTC3-221ENST00000488522 FAM110CQ1W6H9 321 aa15.2■□□□□ 0.02
TTC3-221ENST00000488522 PROCA1Q8NCQ7 364 aaPredicted RBP15.2■□□□□ 0.02
TTC3-221ENST00000488522 DPF3Q92784 378 aa15.2■□□□□ 0.02
TTC3-221ENST00000488522 CDCA7LQ96GN5 454 aa15.2■□□□□ 0.02
TTC3-221ENST00000488522 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
TTC3-221ENST00000488522 LAMA3Q16787 3333 aa15.2■□□□□ 0.02
TTC3-221ENST00000488522 ATAD5Q96QE3 1844 aa15.2■□□□□ 0.02
TTC3-221ENST00000488522 A0A1B0GUL7 405 aa15.19■□□□□ 0.02
TTC3-221ENST00000488522 ZBTB7BO15156 539 aaPredicted RBP15.19■□□□□ 0.02
TTC3-221ENST00000488522 ECM2O94769 699 aaPredicted RBP15.19■□□□□ 0.02
TTC3-221ENST00000488522 MVPQ14764 893 aaKnown RBP15.19■□□□□ 0.02
TTC3-221ENST00000488522 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
TTC3-221ENST00000488522 ZSCAN29Q8IWY8 852 aaPredicted RBP15.19■□□□□ 0.02
TTC3-221ENST00000488522 MEIS3Q99687 375 aa15.19■□□□□ 0.02
TTC3-221ENST00000488522 CRISPLD2Q9H0B8 497 aa15.19■□□□□ 0.02
TTC3-221ENST00000488522 OSBPL5Q9H0X9 879 aaPredicted RBP15.19■□□□□ 0.02
TTC3-221ENST00000488522 NOB1Q9ULX3 412 aaKnown RBP15.19■□□□□ 0.02
TTC3-221ENST00000488522 AKAP2Q9Y2D5 859 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms