RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 LRRIQ3A6PVS8 624 aaPredicted RBP7.2□□□□□ -1.26
SIK3-212ENST00000488337 DHX8Q14562 1220 aaKnown RBP7.2□□□□□ -1.26
SIK3-212ENST00000488337 CASP8Q14790 479 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 CCDC13Q8IYE1 715 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 SPIRE2Q8WWL2 714 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 CCDC102AQ96A19 550 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 PNKPQ96T60 521 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 IRF2BPLQ9H1B7 796 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 HDAC6Q9UBN7 1215 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 ATP8A1Q9Y2Q0 1164 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 IQGAP1P46940 1657 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 RNF40O75150 1001 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 CAVIN2O95810 425 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 KBTBD12Q3ZCT8 623 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 ANO6Q4KMQ2 910 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 NUGGCQ68CJ6 796 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 ARMCX5Q6P1M9 558 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 CYB5D1Q6P9G0 228 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 RPAP2Q8IXW5 612 aaPredicted RBP7.2□□□□□ -1.26
SIK3-212ENST00000488337 MRPL50Q8N5N7 158 aaKnown RBP7.2□□□□□ -1.26
SIK3-212ENST00000488337 ZNF570Q96NI8 536 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 NUP58Q9BVL2 599 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 NACA2Q9H009 215 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 PCMTD2Q9NV79 361 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 TPCN1Q9ULQ1 816 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 EZRP15311 586 aaKnown RBP7.19□□□□□ -1.26
SIK3-212ENST00000488337 FBLN1P23142 703 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 SLC8A1P32418 973 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 FOXD4Q12950 439 aaPredicted RBP7.19□□□□□ -1.26
SIK3-212ENST00000488337 KLHL10Q6JEL2 608 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 PRPF40BQ6NWY9 871 aaKnown RBP7.19□□□□□ -1.26
SIK3-212ENST00000488337 PLEKHM2Q8IWE5 1019 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 EVI5LQ96CN4 794 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 RMDN2Q96LZ7 410 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 UBE2OQ9C0C9 1292 aaKnown RBP7.19□□□□□ -1.26
SIK3-212ENST00000488337 NEO1Q92859 1461 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 A0A1W2PP64 1363 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 MBD4O95243 580 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 VDRP11473 427 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 GSDMDP57764 484 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 PRPF4BQ13523 1007 aaKnown RBP7.19□□□□□ -1.26
SIK3-212ENST00000488337 TTC22Q5TAA0 569 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 TAX1BP1Q86VP1 789 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 ARL10Q8N8L6 244 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 BPIFA3Q9BQP9 254 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 FAM135BQ49AJ0 1406 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 SHTN1A0MZ66 631 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 ARHGAP25P42331 645 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 CRELD2Q6UXH1 353 aaPredicted RBP7.19□□□□□ -1.26
SIK3-212ENST00000488337 SLC15A3Q8IY34 581 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 C16orf71Q8IYS4 520 aaPredicted RBP7.19□□□□□ -1.26
SIK3-212ENST00000488337 MIPOL1Q8TD10 442 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 CNKSR1Q969H4 720 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 SUGCTQ9HAC7 445 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 WDR35Q9P2L0 1181 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 CHD2O14647 1828 aaKnown RBP7.19□□□□□ -1.26
SIK3-212ENST00000488337 SLMAPQ14BN4 828 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 SAPCD2Q86UD0 394 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 ANKK1Q8NFD2 765 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 MPHOSPH8Q99549 860 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 CDK19Q9BWU1 502 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 DCTPP1Q9H773 170 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 ABCB6Q9NP58 842 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 ANO2Q9NQ90 1003 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 MBIPQ9NS73 344 aa7.19□□□□□ -1.26
SIK3-212ENST00000488337 UGGT1Q9NYU2 1555 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 ADGRL1O94910 1474 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 PIK3R4Q99570 1358 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 MAP3K13O43283 966 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 GNAT1P11488 350 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 SDSP20132 328 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 ABL2P42684 1182 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 PSMC1P62191 440 aaKnown RBP7.18□□□□□ -1.26
SIK3-212ENST00000488337 CPSF1Q10570 1443 aaKnown RBP7.18□□□□□ -1.26
SIK3-212ENST00000488337 PPP1R15BQ5SWA1 713 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 CCDC181Q5TID7 509 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 SYNE3Q6ZMZ3 975 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 CCDC80Q76M96 950 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 APLFQ8IW19 511 aaPredicted RBP7.18□□□□□ -1.26
SIK3-212ENST00000488337 RASSF8Q8NHQ8 419 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 RILPL2Q969X0 211 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 CCDC47Q96A33 483 aaKnown RBP7.18□□□□□ -1.26
SIK3-212ENST00000488337 RSRC1Q96IZ7 334 aaKnown RBP7.18□□□□□ -1.26
SIK3-212ENST00000488337 PHACTR3Q96KR7 559 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 VWA3AA6NCI4 1184 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 PPP1R12BO60237 982 aaPredicted RBP7.18□□□□□ -1.26
SIK3-212ENST00000488337 ERLIN1O75477 346 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 PPP2R3AQ06190 1150 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 PTK7Q13308 1070 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 MAP3K11Q16584 847 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 LRRC23Q53EV4 343 aaPredicted RBP7.18□□□□□ -1.26
SIK3-212ENST00000488337 MICALCLQ6ZW33 695 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 LEO1Q8WVC0 666 aaPredicted RBP7.18□□□□□ -1.26
SIK3-212ENST00000488337 GOLGA1Q92805 767 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 IFT43Q96FT9 208 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 MTRQ99707 1265 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 SLC5A4Q9NY91 659 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 C15orf41Q9Y2V0 281 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 AGPSO00116 658 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 ZNF189O75820 626 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms