RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 BTDP43251 543 aa18.91■□□□□ 0.62
TRIM50-203ENST00000488217 PRMT2P55345 433 aa18.91■□□□□ 0.62
TRIM50-203ENST00000488217 SPATA5Q8NB90 893 aa18.91■□□□□ 0.62
TRIM50-203ENST00000488217 MKI67P46013 3256 aaKnown RBP18.9■□□□□ 0.62
TRIM50-203ENST00000488217 PNMA6EA0A0J9YXQ4 647 aa18.9■□□□□ 0.62
TRIM50-203ENST00000488217 PTPRAP18433 802 aa18.9■□□□□ 0.62
TRIM50-203ENST00000488217 HOXD10P28358 340 aa18.9■□□□□ 0.62
TRIM50-203ENST00000488217 PSMC4P43686 418 aa18.9■□□□□ 0.62
TRIM50-203ENST00000488217 SLC4A8Q2Y0W8 1093 aa18.9■□□□□ 0.62
TRIM50-203ENST00000488217 GPAT2Q6NUI2 795 aa18.9■□□□□ 0.62
TRIM50-203ENST00000488217 TBC1D9Q6ZT07 1266 aa18.9■□□□□ 0.62
TRIM50-203ENST00000488217 FASTKD5Q7L8L6 764 aaKnown RBP18.9■□□□□ 0.62
TRIM50-203ENST00000488217 SCYL3Q8IZE3 742 aa18.9■□□□□ 0.62
TRIM50-203ENST00000488217 CTNND1O60716 968 aaKnown RBP18.89■□□□□ 0.61
TRIM50-203ENST00000488217 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
TRIM50-203ENST00000488217 MAP4K4O95819 1239 aaPredicted RBP18.89■□□□□ 0.61
TRIM50-203ENST00000488217 RHBDL3P58872 404 aa18.89■□□□□ 0.61
TRIM50-203ENST00000488217 GSTO1P78417 241 aa18.89■□□□□ 0.61
TRIM50-203ENST00000488217 PICALMQ13492 652 aa18.89■□□□□ 0.61
TRIM50-203ENST00000488217 ZKSCAN2Q63HK3 967 aa18.89■□□□□ 0.61
TRIM50-203ENST00000488217 DDX4Q9NQI0 724 aaKnown RBP18.89■□□□□ 0.61
TRIM50-203ENST00000488217 AFG3L2Q9Y4W6 797 aa18.89■□□□□ 0.61
TRIM50-203ENST00000488217 MROH7-TTC4A0A0A0MT08 1334 aa18.89■□□□□ 0.61
TRIM50-203ENST00000488217 TBC1D12O60347 775 aa18.88■□□□□ 0.61
TRIM50-203ENST00000488217 ECM2O94769 699 aaPredicted RBP18.88■□□□□ 0.61
TRIM50-203ENST00000488217 FMNL1O95466 1100 aaPredicted RBP18.88■□□□□ 0.61
TRIM50-203ENST00000488217 CTGFP29279 349 aa18.88■□□□□ 0.61
TRIM50-203ENST00000488217 TMEM57Q8N5G2 664 aa18.88■□□□□ 0.61
TRIM50-203ENST00000488217 SH3TC2Q8TF17 1288 aa18.88■□□□□ 0.61
TRIM50-203ENST00000488217 ZNF384Q8TF68 577 aa18.88■□□□□ 0.61
TRIM50-203ENST00000488217 NSUN4Q96CB9 384 aaKnown RBP18.88■□□□□ 0.61
TRIM50-203ENST00000488217 TRIM47Q96LD4 638 aa18.88■□□□□ 0.61
TRIM50-203ENST00000488217 RAI14Q9P0K7 980 aa18.88■□□□□ 0.61
TRIM50-203ENST00000488217 A0A0G2JLL6 359 aaPredicted RBP18.87■□□□□ 0.61
TRIM50-203ENST00000488217 MYCP01106 439 aaPredicted RBP18.87■□□□□ 0.61
TRIM50-203ENST00000488217 UQCRFS1P1P0C7P4 283 aa18.87■□□□□ 0.61
TRIM50-203ENST00000488217 SLURP2P0DP57 97 aa18.87■□□□□ 0.61
TRIM50-203ENST00000488217 CYP2C8P10632 490 aa18.87■□□□□ 0.61
TRIM50-203ENST00000488217 ATP8B2P98198 1209 aa18.87■□□□□ 0.61
TRIM50-203ENST00000488217 ATRNL1Q5VV63 1379 aa18.87■□□□□ 0.61
TRIM50-203ENST00000488217 PI16Q6UXB8 463 aa18.87■□□□□ 0.61
TRIM50-203ENST00000488217 PRRT2Q7Z6L0 340 aaPredicted RBP18.87■□□□□ 0.61
TRIM50-203ENST00000488217 PARK7Q99497 189 aaKnown RBP18.87■□□□□ 0.61
TRIM50-203ENST00000488217 SRRDQ9UH36 339 aa18.87■□□□□ 0.61
TRIM50-203ENST00000488217 ARAP2Q8WZ64 1704 aa18.86■□□□□ 0.61
TRIM50-203ENST00000488217 ARID4AP29374 1257 aaPredicted RBP18.86■□□□□ 0.61
TRIM50-203ENST00000488217 LRP2BPQ9P2M1 347 aa18.86■□□□□ 0.61
TRIM50-203ENST00000488217 PDE4DIPQ5VU43 2346 aa18.85■□□□□ 0.61
TRIM50-203ENST00000488217 ADGRA2Q96PE1 1338 aa18.85■□□□□ 0.61
TRIM50-203ENST00000488217 BCRP11274 1271 aa18.85■□□□□ 0.61
TRIM50-203ENST00000488217 OSBPP22059 807 aa18.85■□□□□ 0.61
TRIM50-203ENST00000488217 POLA2Q14181 598 aa18.85■□□□□ 0.61
TRIM50-203ENST00000488217 GPR108Q9NPR9 543 aa18.85■□□□□ 0.61
TRIM50-203ENST00000488217 BRCA2P51587 3418 aa18.85■□□□□ 0.61
TRIM50-203ENST00000488217 MCAMP43121 646 aa18.84■□□□□ 0.61
TRIM50-203ENST00000488217 CCDC158Q5M9N0 1113 aa18.84■□□□□ 0.61
TRIM50-203ENST00000488217 GADL1Q6ZQY3 521 aa18.84■□□□□ 0.61
TRIM50-203ENST00000488217 RAET1EQ8TD07 263 aa18.84■□□□□ 0.61
TRIM50-203ENST00000488217 SSH3Q8TE77 659 aa18.84■□□□□ 0.61
TRIM50-203ENST00000488217 GCC1Q96CN9 775 aa18.84■□□□□ 0.61
TRIM50-203ENST00000488217 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRIM50-203ENST00000488217 SLC45A1Q9Y2W3 748 aa18.84■□□□□ 0.61
TRIM50-203ENST00000488217 SURF6O75683 361 aaKnown RBP18.83■□□□□ 0.6
TRIM50-203ENST00000488217 SNRKQ9NRH2 765 aa18.83■□□□□ 0.6
TRIM50-203ENST00000488217 OTOFQ9HC10 1997 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 RFX7Q2KHR2 1363 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 TRIM75PA6NK02 468 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 ZBTB7BO15156 539 aaPredicted RBP18.82■□□□□ 0.6
TRIM50-203ENST00000488217 BAG3O95817 575 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 GRK4P32298 578 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 FCGRTP55899 365 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 OS9Q13438 667 aaPredicted RBP18.82■□□□□ 0.6
TRIM50-203ENST00000488217 TNNI3KQ59H18 835 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 TTC39AQ5SRH9 613 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 PCDH10Q9P2E7 1040 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 FPGT-TNNI3KV9GXZ4 949 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 LAMB1P07942 1786 aa18.82■□□□□ 0.6
TRIM50-203ENST00000488217 PPP4CP60510 307 aa18.81■□□□□ 0.6
TRIM50-203ENST00000488217 HNRNPUQ00839 825 aaKnown RBP eCLIP18.81■□□□□ 0.6
TRIM50-203ENST00000488217 MTFR1Q15390 333 aa18.81■□□□□ 0.6
TRIM50-203ENST00000488217 TEX11Q8IYF3 940 aa18.81■□□□□ 0.6
TRIM50-203ENST00000488217 NOL10Q9BSC4 688 aaKnown RBP18.81■□□□□ 0.6
TRIM50-203ENST00000488217 OSBPL5Q9H0X9 879 aaPredicted RBP18.81■□□□□ 0.6
TRIM50-203ENST00000488217 NOP58Q9Y2X3 529 aaKnown RBP18.81■□□□□ 0.6
TRIM50-203ENST00000488217 MYPNQ86TC9 1320 aa18.8■□□□□ 0.6
TRIM50-203ENST00000488217 FAM196BA6NMK8 535 aa18.8■□□□□ 0.6
TRIM50-203ENST00000488217 SPP2Q13103 211 aa18.8■□□□□ 0.6
TRIM50-203ENST00000488217 NAA16Q6N069 864 aaPredicted RBP18.8■□□□□ 0.6
TRIM50-203ENST00000488217 MIER1Q8N108 512 aa18.8■□□□□ 0.6
TRIM50-203ENST00000488217 SH3RF3Q8TEJ3 882 aaPredicted RBP18.8■□□□□ 0.6
TRIM50-203ENST00000488217 ZNF512BQ96KM6 892 aaPredicted RBP18.8■□□□□ 0.6
TRIM50-203ENST00000488217 DBNDD2Q9BQY9 259 aa18.8■□□□□ 0.6
TRIM50-203ENST00000488217 PI4KBQ9UBF8 816 aa18.8■□□□□ 0.6
TRIM50-203ENST00000488217 BIN2Q9UBW5 565 aaPredicted RBP18.8■□□□□ 0.6
TRIM50-203ENST00000488217 CAP2P40123 477 aa18.79■□□□□ 0.6
TRIM50-203ENST00000488217 PRKCZQ05513 592 aa18.79■□□□□ 0.6
TRIM50-203ENST00000488217 CCDC84Q86UT8 332 aaPredicted RBP18.79■□□□□ 0.6
TRIM50-203ENST00000488217 FOXP4Q8IVH2 680 aaPredicted RBP18.79■□□□□ 0.6
TRIM50-203ENST00000488217 FTSJ3Q8IY81 847 aaKnown RBP18.79■□□□□ 0.6
TRIM50-203ENST00000488217 ZNF280CQ8ND82 737 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms