RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 UQCRFS1P1P0C7P4 283 aa15.13■□□□□ 0.01
SDC3-204ENST00000487984 RHBDL3P58872 404 aa15.13■□□□□ 0.01
SDC3-204ENST00000487984 PICALMQ13492 652 aa15.13■□□□□ 0.01
SDC3-204ENST00000487984 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.13■□□□□ 0.01
SDC3-204ENST00000487984 NSUN4Q96CB9 384 aaKnown RBP15.13■□□□□ 0.01
SDC3-204ENST00000487984 DBNDD2Q9BQY9 259 aa15.13■□□□□ 0.01
SDC3-204ENST00000487984 EFCC1Q9HA90 598 aa15.13■□□□□ 0.01
SDC3-204ENST00000487984 ZCCHC17Q9NP64 241 aaKnown RBP15.13■□□□□ 0.01
SDC3-204ENST00000487984 KCNH4Q9UQ05 1017 aa15.13■□□□□ 0.01
SDC3-204ENST00000487984 MYH2Q9UKX2 1941 aa15.12■□□□□ 0.01
SDC3-204ENST00000487984 PHF20L1A8MW92 1017 aa15.12■□□□□ 0.01
SDC3-204ENST00000487984 GSTO1P78417 241 aa15.12■□□□□ 0.01
SDC3-204ENST00000487984 ZSCAN29Q8IWY8 852 aaPredicted RBP15.12■□□□□ 0.01
SDC3-204ENST00000487984 PANK1Q8TE04 598 aa15.12■□□□□ 0.01
SDC3-204ENST00000487984 RAI14Q9P0K7 980 aa15.12■□□□□ 0.01
SDC3-204ENST00000487984 PTPN22Q9Y2R2 807 aa15.12■□□□□ 0.01
SDC3-204ENST00000487984 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
SDC3-204ENST00000487984 TLR2O60603 784 aa15.11■□□□□ 0.01
SDC3-204ENST00000487984 LDHCP07864 332 aa15.11■□□□□ 0.01
SDC3-204ENST00000487984 SLURP2P0DP57 97 aa15.11■□□□□ 0.01
SDC3-204ENST00000487984 MAP3K10Q02779 954 aa15.11■□□□□ 0.01
SDC3-204ENST00000487984 TTC39AQ5SRH9 613 aa15.11■□□□□ 0.01
SDC3-204ENST00000487984 CEP85Q6P2H3 762 aa15.11■□□□□ 0.01
SDC3-204ENST00000487984 SNRKQ9NRH2 765 aa15.11■□□□□ 0.01
SDC3-204ENST00000487984 LRP2BPQ9P2M1 347 aa15.11■□□□□ 0.01
SDC3-204ENST00000487984 MOGSQ13724 837 aa15.1■□□□□ 0.01
SDC3-204ENST00000487984 CCDC158Q5M9N0 1113 aa15.1■□□□□ 0.01
SDC3-204ENST00000487984 ANKRD23Q86SG2 305 aa15.1■□□□□ 0.01
SDC3-204ENST00000487984 SCYL3Q8IZE3 742 aa15.1■□□□□ 0.01
SDC3-204ENST00000487984 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
SDC3-204ENST00000487984 MAP4K4O95819 1239 aaPredicted RBP15.09■□□□□ 0.01
SDC3-204ENST00000487984 PTPRAP18433 802 aa15.09■□□□□ 0.01
SDC3-204ENST00000487984 PICK1Q9NRD5 415 aa15.09■□□□□ 0.01
SDC3-204ENST00000487984 TLR7Q9NYK1 1049 aaKnown RBP15.09■□□□□ 0.01
SDC3-204ENST00000487984 DBNLQ9UJU6 430 aaKnown RBP15.09■□□□□ 0.01
SDC3-204ENST00000487984 TNRC18O15417 2968 aaPredicted RBP15.09■□□□□ 0.01
SDC3-204ENST00000487984 PDHXO00330 501 aa15.08■□□□□ 0
SDC3-204ENST00000487984 CXCL11O14625 94 aa15.08■□□□□ 0
SDC3-204ENST00000487984 CYP2E1P05181 493 aaPredicted RBP15.08■□□□□ 0
SDC3-204ENST00000487984 ZNF512BQ96KM6 892 aaPredicted RBP15.08■□□□□ 0
SDC3-204ENST00000487984 ARHGAP39Q9C0H5 1083 aa15.08■□□□□ 0
SDC3-204ENST00000487984 CCDC8Q9H0W5 538 aaPredicted RBP15.08■□□□□ 0
SDC3-204ENST00000487984 ZHX2Q9Y6X8 837 aa15.08■□□□□ 0
SDC3-204ENST00000487984 DOCK2Q92608 1830 aa15.08■□□□□ 0
SDC3-204ENST00000487984 AK9Q5TCS8 1911 aa15.07■□□□□ 0
SDC3-204ENST00000487984 CTNND1O60716 968 aaKnown RBP15.07■□□□□ 0
SDC3-204ENST00000487984 ZAP70P43403 619 aa15.07■□□□□ 0
SDC3-204ENST00000487984 LACTBP83111 547 aaPredicted RBP15.07■□□□□ 0
SDC3-204ENST00000487984 ARHGEF6Q15052 776 aa15.07■□□□□ 0
SDC3-204ENST00000487984 NAA16Q6N069 864 aaPredicted RBP15.07■□□□□ 0
SDC3-204ENST00000487984 C17orf99Q6UX52 265 aa15.07■□□□□ 0
SDC3-204ENST00000487984 TEX11Q8IYF3 940 aa15.07■□□□□ 0
SDC3-204ENST00000487984 SH3RF3Q8TEJ3 882 aaPredicted RBP15.07■□□□□ 0
SDC3-204ENST00000487984 ARMC5Q96C12 935 aa15.07■□□□□ 0
SDC3-204ENST00000487984 EAF2Q96CJ1 260 aaPredicted RBP15.07■□□□□ 0
SDC3-204ENST00000487984 OSBPL5Q9H0X9 879 aaPredicted RBP15.07■□□□□ 0
SDC3-204ENST00000487984 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.07■□□□□ 0
SDC3-204ENST00000487984 CPA4Q9UI42 421 aa15.07■□□□□ 0
SDC3-204ENST00000487984 EXOC6BQ9Y2D4 811 aa15.07■□□□□ 0
SDC3-204ENST00000487984 ADGRA2Q96PE1 1338 aa15.07■□□□□ 0
SDC3-204ENST00000487984 COL2A1P02458 1487 aaPredicted RBP15.07■□□□□ 0
SDC3-204ENST00000487984 A0A0G2JLL6 359 aaPredicted RBP15.06■□□□□ 0
SDC3-204ENST00000487984 FAM196BA6NMK8 535 aa15.06■□□□□ 0
SDC3-204ENST00000487984 TBC1D12O60347 775 aa15.06■□□□□ 0
SDC3-204ENST00000487984 GPAT2Q6NUI2 795 aa15.06■□□□□ 0
SDC3-204ENST00000487984 PRRT2Q7Z6L0 340 aaPredicted RBP15.06■□□□□ 0
SDC3-204ENST00000487984 ADGRA1Q86SQ6 560 aa15.06■□□□□ 0
SDC3-204ENST00000487984 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.06■□□□□ 0
SDC3-204ENST00000487984 PIH1D3Q9NQM4 214 aaKnown RBP15.06■□□□□ 0
SDC3-204ENST00000487984 AATFQ9NY61 560 aaKnown RBP eCLIP15.06■□□□□ 0
SDC3-204ENST00000487984 AFG3L2Q9Y4W6 797 aa15.06■□□□□ 0
SDC3-204ENST00000487984 PTCH2Q9Y6C5 1203 aa15.06■□□□□ 0
SDC3-204ENST00000487984 CENPFP49454 3210 aa15.05■□□□□ 0
SDC3-204ENST00000487984 MS4A1P11836 297 aa15.05■□□□□ -0
SDC3-204ENST00000487984 KIF22Q14807 665 aa15.05■□□□□ -0
SDC3-204ENST00000487984 CCDC84Q86UT8 332 aaPredicted RBP15.05■□□□□ -0
SDC3-204ENST00000487984 PARK7Q99497 189 aaKnown RBP15.05■□□□□ -0
SDC3-204ENST00000487984 NOL10Q9BSC4 688 aaKnown RBP15.05■□□□□ -0
SDC3-204ENST00000487984 PDE4DIPQ5VU43 2346 aa15.04■□□□□ -0
SDC3-204ENST00000487984 POTEFA5A3E0 1075 aa15.04■□□□□ -0
SDC3-204ENST00000487984 TRIM75PA6NK02 468 aa15.04■□□□□ -0
SDC3-204ENST00000487984 ECM2O94769 699 aaPredicted RBP15.04■□□□□ -0
SDC3-204ENST00000487984 BAG3O95817 575 aa15.04■□□□□ -0
SDC3-204ENST00000487984 CYP2C8P10632 490 aa15.04■□□□□ -0
SDC3-204ENST00000487984 PLCG2P16885 1265 aa15.04■□□□□ -0
SDC3-204ENST00000487984 CTGFP29279 349 aa15.04■□□□□ -0
SDC3-204ENST00000487984 PPP4CP60510 307 aa15.04■□□□□ -0
SDC3-204ENST00000487984 FASTKD5Q7L8L6 764 aaKnown RBP15.04■□□□□ -0
SDC3-204ENST00000487984 ERC1Q8IUD2 1116 aa15.04■□□□□ -0
SDC3-204ENST00000487984 ZNF333Q96JL9 665 aa15.04■□□□□ -0
SDC3-204ENST00000487984 SLC9C1Q4G0N8 1177 aa15.03■□□□□ -0
SDC3-204ENST00000487984 GADL1Q6ZQY3 521 aa15.03■□□□□ -0
SDC3-204ENST00000487984 AACSQ86V21 672 aa15.03■□□□□ -0
SDC3-204ENST00000487984 TGFBRAP1Q8WUH2 860 aa15.03■□□□□ -0
SDC3-204ENST00000487984 COG6Q9Y2V7 657 aa15.03■□□□□ -0
SDC3-204ENST00000487984 NDUFB9Q9Y6M9 179 aa15.03■□□□□ -0
SDC3-204ENST00000487984 MAST2Q6P0Q8 1798 aa15.03■□□□□ -0
SDC3-204ENST00000487984 FLT1P17948 1338 aa15.02■□□□□ -0
SDC3-204ENST00000487984 IGSF3O75054 1194 aa15.02■□□□□ -0
SDC3-204ENST00000487984 GNRH1P01148 92 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms