RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-215	ENST00000487563	MCAM	P43121	646 aa		29	■■■□□ 2.23
PLOD3-215	ENST00000487563	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	29	■■■□□ 2.23
PLOD3-215	ENST00000487563	ZCCHC17	Q9NP64	241 aa	Known RBP	29	■■■□□ 2.23
PLOD3-215	ENST00000487563	LRP2BP	Q9P2M1	347 aa		29	■■■□□ 2.23
PLOD3-215	ENST00000487563	BTBD19	C9JJ37	291 aa		28.99	■■■□□ 2.23
PLOD3-215	ENST00000487563	CCDC158	Q5M9N0	1113 aa		28.99	■■■□□ 2.23
PLOD3-215	ENST00000487563	NOL9	Q5SY16	702 aa	Known RBP	28.99	■■■□□ 2.23
PLOD3-215	ENST00000487563	GPR75-ASB3	A0A0A6YYF3	556 aa		28.98	■■■□□ 2.23
PLOD3-215	ENST00000487563	ARHGEF6	Q15052	776 aa		28.98	■■■□□ 2.23
PLOD3-215	ENST00000487563	NSUN4	Q96CB9	384 aa	Known RBP	28.98	■■■□□ 2.23
PLOD3-215	ENST00000487563	DBNDD2	Q9BQY9	259 aa		28.98	■■■□□ 2.23
PLOD3-215	ENST00000487563	DDX4	Q9NQI0	724 aa	Known RBP	28.98	■■■□□ 2.23
PLOD3-215	ENST00000487563	NOL10	Q9BSC4	688 aa	Known RBP	28.97	■■■□□ 2.23
PLOD3-215	ENST00000487563	PICK1	Q9NRD5	415 aa		28.97	■■■□□ 2.23
PLOD3-215	ENST00000487563	PTPN22	Q9Y2R2	807 aa		28.97	■■■□□ 2.23
PLOD3-215	ENST00000487563	ATRNL1	Q5VV63	1379 aa		28.97	■■■□□ 2.23
PLOD3-215	ENST00000487563	SH3BP5L	Q7L8J4	393 aa		28.96	■■■□□ 2.23
PLOD3-215	ENST00000487563	ZNF384	Q8TF68	577 aa		28.96	■■■□□ 2.23
PLOD3-215	ENST00000487563	SNRK	Q9NRH2	765 aa		28.96	■■■□□ 2.23
PLOD3-215	ENST00000487563	DDTL	A6NHG4	134 aa	Predicted RBP	28.95	■■■□□ 2.22
PLOD3-215	ENST00000487563	RHBDL3	P58872	404 aa		28.95	■■■□□ 2.22
PLOD3-215	ENST00000487563	SCYL3	Q8IZE3	742 aa		28.95	■■■□□ 2.22
PLOD3-215	ENST00000487563	PANK1	Q8TE04	598 aa		28.95	■■■□□ 2.22
PLOD3-215	ENST00000487563	KCNH4	Q9UQ05	1017 aa		28.95	■■■□□ 2.22
PLOD3-215	ENST00000487563	NOP58	Q9Y2X3	529 aa	Known RBP	28.95	■■■□□ 2.22
PLOD3-215	ENST00000487563	TLR2	O60603	784 aa		28.94	■■■□□ 2.22
PLOD3-215	ENST00000487563	MAP4K4	O95819	1239 aa	Predicted RBP	28.94	■■■□□ 2.22
PLOD3-215	ENST00000487563	MS4A1	P11836	297 aa		28.94	■■■□□ 2.22
PLOD3-215	ENST00000487563	KIF22	Q14807	665 aa		28.93	■■■□□ 2.22
PLOD3-215	ENST00000487563	ANKRD23	Q86SG2	305 aa		28.93	■■■□□ 2.22
PLOD3-215	ENST00000487563	PHF20L1	A8MW92	1017 aa		28.92	■■■□□ 2.22
PLOD3-215	ENST00000487563	NAA16	Q6N069	864 aa	Predicted RBP	28.92	■■■□□ 2.22
PLOD3-215	ENST00000487563	CEP85	Q6P2H3	762 aa		28.92	■■■□□ 2.22
PLOD3-215	ENST00000487563	MAST2	Q6P0Q8	1798 aa		28.92	■■■□□ 2.22
PLOD3-215	ENST00000487563	PDHX	O00330	501 aa		28.91	■■■□□ 2.22
PLOD3-215	ENST00000487563	NPM3	O75607	178 aa	Known RBP	28.91	■■■□□ 2.22
PLOD3-215	ENST00000487563	TEX11	Q8IYF3	940 aa		28.91	■■■□□ 2.22
PLOD3-215	ENST00000487563	ZHX2	Q9Y6X8	837 aa		28.91	■■■□□ 2.22
PLOD3-215	ENST00000487563	CXCL11	O14625	94 aa		28.9	■■■□□ 2.22
PLOD3-215	ENST00000487563	CAP1	Q01518	475 aa		28.9	■■■□□ 2.22
PLOD3-215	ENST00000487563	MAP3K10	Q02779	954 aa		28.89	■■■□□ 2.22
PLOD3-215	ENST00000487563	CCDC8	Q9H0W5	538 aa	Predicted RBP	28.89	■■■□□ 2.22
PLOD3-215	ENST00000487563	DBNL	Q9UJU6	430 aa	Known RBP	28.89	■■■□□ 2.22
PLOD3-215	ENST00000487563	CTNND1	O60716	968 aa	Known RBP	28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	BAG3	O95817	575 aa		28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	SLURP2	P0DP57	97 aa		28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	PTPRA	P18433	802 aa		28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	ERC1	Q8IUD2	1116 aa		28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	ZNF512B	Q96KM6	892 aa	Predicted RBP	28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	OSBPL5	Q9H0X9	879 aa	Predicted RBP	28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	TLR7	Q9NYK1	1049 aa	Known RBP	28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	DOCK1	Q14185	1865 aa		28.88	■■■□□ 2.21
PLOD3-215	ENST00000487563	COL2A1	P02458	1487 aa	Predicted RBP	28.87	■■■□□ 2.21
PLOD3-215	ENST00000487563	CYP2E1	P05181	493 aa	Predicted RBP	28.87	■■■□□ 2.21
PLOD3-215	ENST00000487563	ZAP70	P43403	619 aa		28.87	■■■□□ 2.21
PLOD3-215	ENST00000487563	LACTB	P83111	547 aa	Predicted RBP	28.87	■■■□□ 2.21
PLOD3-215	ENST00000487563	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	28.87	■■■□□ 2.21
PLOD3-215	ENST00000487563	PARK7	Q99497	189 aa	Known RBP	28.87	■■■□□ 2.21
PLOD3-215	ENST00000487563	AATF	Q9NY61	560 aa	Known RBP eCLIP	28.87	■■■□□ 2.21
PLOD3-215	ENST00000487563	CPA4	Q9UI42	421 aa		28.87	■■■□□ 2.21
PLOD3-215	ENST00000487563	EXOC6B	Q9Y2D4	811 aa		28.87	■■■□□ 2.21
PLOD3-215	ENST00000487563	PLCG2	P16885	1265 aa		28.86	■■■□□ 2.21
PLOD3-215	ENST00000487563	EAF2	Q96CJ1	260 aa	Predicted RBP	28.86	■■■□□ 2.21
PLOD3-215	ENST00000487563	FAM196B	A6NMK8	535 aa		28.85	■■■□□ 2.21
PLOD3-215	ENST00000487563	TBC1D12	O60347	775 aa		28.85	■■■□□ 2.21
PLOD3-215	ENST00000487563	MOGS	Q13724	837 aa		28.85	■■■□□ 2.21
PLOD3-215	ENST00000487563	GADL1	Q6ZQY3	521 aa		28.85	■■■□□ 2.21
PLOD3-215	ENST00000487563	FASTKD5	Q7L8L6	764 aa	Known RBP	28.85	■■■□□ 2.21
PLOD3-215	ENST00000487563	ARHGAP39	Q9C0H5	1083 aa		28.85	■■■□□ 2.21
PLOD3-215	ENST00000487563	PTCH2	Q9Y6C5	1203 aa		28.85	■■■□□ 2.21
PLOD3-215	ENST00000487563		A0A0G2JLL6	359 aa	Predicted RBP	28.84	■■■□□ 2.21
PLOD3-215	ENST00000487563	ECM2	O94769	699 aa	Predicted RBP	28.84	■■■□□ 2.21
PLOD3-215	ENST00000487563	SLC9C1	Q4G0N8	1177 aa		28.84	■■■□□ 2.21
PLOD3-215	ENST00000487563	HSP90AB4P	Q58FF6	505 aa		28.84	■■■□□ 2.21
PLOD3-215	ENST00000487563	C17orf99	Q6UX52	265 aa		28.84	■■■□□ 2.21
PLOD3-215	ENST00000487563	PRRT2	Q7Z6L0	340 aa	Predicted RBP	28.84	■■■□□ 2.21
PLOD3-215	ENST00000487563	ARMC5	Q96C12	935 aa		28.84	■■■□□ 2.21
PLOD3-215	ENST00000487563	AFG3L2	Q9Y4W6	797 aa		28.84	■■■□□ 2.21
PLOD3-215	ENST00000487563	AACS	Q86V21	672 aa		28.83	■■■□□ 2.21
PLOD3-215	ENST00000487563	PIH1D3	Q9NQM4	214 aa	Known RBP	28.83	■■■□□ 2.21
PLOD3-215	ENST00000487563	DDX19B	Q9UMR2	479 aa		28.83	■■■□□ 2.21
PLOD3-215	ENST00000487563	HTT	P42858	3142 aa		28.83	■■■□□ 2.2
PLOD3-215	ENST00000487563	TRIM75P	A6NK02	468 aa		28.82	■■■□□ 2.2
PLOD3-215	ENST00000487563	IGSF3	O75054	1194 aa		28.82	■■■□□ 2.2
PLOD3-215	ENST00000487563	GNRH1	P01148	92 aa		28.82	■■■□□ 2.2
PLOD3-215	ENST00000487563	GPAT2	Q6NUI2	795 aa		28.82	■■■□□ 2.2
PLOD3-215	ENST00000487563	NBPF11	Q86T75	865 aa		28.82	■■■□□ 2.2
PLOD3-215	ENST00000487563	ZSWIM8	A7E2V4	1837 aa		28.82	■■■□□ 2.2
PLOD3-215	ENST00000487563	ADGRA2	Q96PE1	1338 aa		28.81	■■■□□ 2.2
PLOD3-215	ENST00000487563	IDH1	O75874	414 aa	Known RBP	28.81	■■■□□ 2.2
PLOD3-215	ENST00000487563	CCDC84	Q86UT8	332 aa	Predicted RBP	28.81	■■■□□ 2.2
PLOD3-215	ENST00000487563	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	28.81	■■■□□ 2.2
PLOD3-215	ENST00000487563	COG6	Q9Y2V7	657 aa		28.81	■■■□□ 2.2
PLOD3-215	ENST00000487563	PDE4DIP	Q5VU43	2346 aa		28.8	■■■□□ 2.2
PLOD3-215	ENST00000487563	TNRC18	O15417	2968 aa	Predicted RBP	28.8	■■■□□ 2.2
PLOD3-215	ENST00000487563	HMMR	O75330	724 aa		28.8	■■■□□ 2.2
PLOD3-215	ENST00000487563	CYP2C8	P10632	490 aa		28.8	■■■□□ 2.2
PLOD3-215	ENST00000487563	PPP4C	P60510	307 aa		28.8	■■■□□ 2.2
PLOD3-215	ENST00000487563	ADGRA1	Q86SQ6	560 aa		28.8	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms