RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 FOCADQ5VW36 1801 aa12.53□□□□□ -0.4
RNF220-215ENST00000487332 TBC1D12O60347 775 aa12.52□□□□□ -0.41
RNF220-215ENST00000487332 GJA5P36382 358 aa12.52□□□□□ -0.41
RNF220-215ENST00000487332 TCP10Q12799 353 aa12.52□□□□□ -0.41
RNF220-215ENST00000487332 ERO1BQ86YB8 467 aa12.52□□□□□ -0.41
RNF220-215ENST00000487332 TNS4Q8IZW8 715 aa12.52□□□□□ -0.41
RNF220-215ENST00000487332 OPTNQ96CV9 577 aa12.52□□□□□ -0.41
RNF220-215ENST00000487332 OSBPL5Q9H0X9 879 aaPredicted RBP12.52□□□□□ -0.41
RNF220-215ENST00000487332 ZCCHC17Q9NP64 241 aaKnown RBP12.52□□□□□ -0.41
RNF220-215ENST00000487332 DDX4Q9NQI0 724 aaKnown RBP12.52□□□□□ -0.41
RNF220-215ENST00000487332 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.41
RNF220-215ENST00000487332 SNRKQ9NRH2 765 aa12.52□□□□□ -0.41
RNF220-215ENST00000487332 DDX60LQ5H9U9 1706 aaKnown RBP12.51□□□□□ -0.41
RNF220-215ENST00000487332 ATP5JP18859 108 aa12.51□□□□□ -0.41
RNF220-215ENST00000487332 GTF2A2P52657 109 aa12.51□□□□□ -0.41
RNF220-215ENST00000487332 PPATQ06203 517 aa12.51□□□□□ -0.41
RNF220-215ENST00000487332 MAP3K12Q12852 859 aa12.51□□□□□ -0.41
RNF220-215ENST00000487332 PPIL2Q13356 520 aa12.51□□□□□ -0.41
RNF220-215ENST00000487332 SH3BP5LQ7L8J4 393 aa12.51□□□□□ -0.41
RNF220-215ENST00000487332 IFNL1Q8IU54 200 aa12.51□□□□□ -0.41
RNF220-215ENST00000487332 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
RNF220-215ENST00000487332 ELP3Q9H9T3 547 aa12.51□□□□□ -0.41
RNF220-215ENST00000487332 TRPA1O75762 1119 aa12.5□□□□□ -0.41
RNF220-215ENST00000487332 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
RNF220-215ENST00000487332 ZFPM1Q8IX07 1006 aa12.5□□□□□ -0.41
RNF220-215ENST00000487332 TEX11Q8IYF3 940 aa12.5□□□□□ -0.41
RNF220-215ENST00000487332 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
RNF220-215ENST00000487332 DHX36Q9H2U1 1008 aaKnown RBP12.5□□□□□ -0.41
RNF220-215ENST00000487332 DOCK1Q14185 1865 aa12.49□□□□□ -0.41
RNF220-215ENST00000487332 FLT1P17948 1338 aa12.49□□□□□ -0.41
RNF220-215ENST00000487332 DDTLA6NHG4 134 aaPredicted RBP12.49□□□□□ -0.41
RNF220-215ENST00000487332 PHF20L1A8MW92 1017 aa12.49□□□□□ -0.41
RNF220-215ENST00000487332 IDH1O75874 414 aaKnown RBP12.49□□□□□ -0.41
RNF220-215ENST00000487332 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
RNF220-215ENST00000487332 PICALMQ13492 652 aa12.49□□□□□ -0.41
RNF220-215ENST00000487332 ADGRA1Q86SQ6 560 aa12.49□□□□□ -0.41
RNF220-215ENST00000487332 SCYL3Q8IZE3 742 aa12.49□□□□□ -0.41
RNF220-215ENST00000487332 AATFQ9NY61 560 aaKnown RBP eCLIP12.49□□□□□ -0.41
RNF220-215ENST00000487332 HERC5Q9UII4 1024 aaKnown RBP12.49□□□□□ -0.41
RNF220-215ENST00000487332 TSKSQ9UJT2 592 aa12.49□□□□□ -0.41
RNF220-215ENST00000487332 KCNH4Q9UQ05 1017 aa12.49□□□□□ -0.41
RNF220-215ENST00000487332 IGF2BP3O00425 579 aaKnown RBP eCLIP12.48□□□□□ -0.41
RNF220-215ENST00000487332 INPP5BP32019 993 aa12.48□□□□□ -0.41
RNF220-215ENST00000487332 MIGA2Q7L4E1 593 aa12.48□□□□□ -0.41
RNF220-215ENST00000487332 METTL16Q86W50 562 aaKnown RBP12.48□□□□□ -0.41
RNF220-215ENST00000487332 ZSCAN29Q8IWY8 852 aaPredicted RBP12.48□□□□□ -0.41
RNF220-215ENST00000487332 SH3RF3Q8TEJ3 882 aaPredicted RBP12.48□□□□□ -0.41
RNF220-215ENST00000487332 ZKSCAN4Q969J2 545 aaPredicted RBP12.48□□□□□ -0.41
RNF220-215ENST00000487332 OTUD5Q96G74 571 aa12.48□□□□□ -0.41
RNF220-215ENST00000487332 HAUS7Q99871 368 aa12.48□□□□□ -0.41
RNF220-215ENST00000487332 TBC1D2Q9BYX2 928 aa12.48□□□□□ -0.41
RNF220-215ENST00000487332 ANTXR1Q9H6X2 564 aa12.48□□□□□ -0.41
RNF220-215ENST00000487332 PCDHB15Q9Y5E8 787 aa12.48□□□□□ -0.41
RNF220-215ENST00000487332 SIPA1L1O43166 1804 aa12.48□□□□□ -0.41
RNF220-215ENST00000487332 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 APBB1O00213 710 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 CTNND1O60716 968 aaKnown RBP12.47□□□□□ -0.41
RNF220-215ENST00000487332 CETPP11597 493 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 CYP7A1P22680 504 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 SNAPC2Q13487 334 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 HDAC1Q13547 482 aaPredicted RBP12.47□□□□□ -0.41
RNF220-215ENST00000487332 MAGEB6Q8N7X4 407 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 BRI3BPQ8WY22 251 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 GPATCH3Q96I76 525 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 CRBNQ96SW2 442 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
RNF220-215ENST00000487332 PAG1Q9NWQ8 432 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 PI4KBQ9UBF8 816 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
RNF220-215ENST00000487332 TTC41PQ6P2S7 1318 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 TCRBV5S4A2TA0A5A2 114 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 GPR25O00155 361 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 CXCL11O14625 94 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 PDE6AP16499 860 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 CCL15Q16663 113 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 CNKSR2Q8WXI2 1034 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 DNAJC2Q99543 621 aaKnown RBP12.46□□□□□ -0.41
RNF220-215ENST00000487332 PTPN18Q99952 460 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.46□□□□□ -0.41
RNF220-215ENST00000487332 ECHDC1Q9NTX5 307 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 GINM1Q9NU53 330 aa12.46□□□□□ -0.41
RNF220-215ENST00000487332 MYO5AQ9Y4I1 1855 aaKnown RBP12.45□□□□□ -0.42
RNF220-215ENST00000487332 GOLIM4O00461 696 aa12.45□□□□□ -0.42
RNF220-215ENST00000487332 IRF6O14896 467 aa12.45□□□□□ -0.42
RNF220-215ENST00000487332 TGFBRAP1Q8WUH2 860 aa12.45□□□□□ -0.42
RNF220-215ENST00000487332 GCC1Q96CN9 775 aa12.45□□□□□ -0.42
RNF220-215ENST00000487332 EHD4Q9H223 541 aa12.45□□□□□ -0.42
RNF220-215ENST00000487332 NDUFB9Q9Y6M9 179 aa12.45□□□□□ -0.42
RNF220-215ENST00000487332 NAV1Q8NEY1 1877 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 ZNF532Q9HCE3 1301 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 FKTNO75072 461 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 TBC1D8O95759 1140 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 HLA-DOAP06340 250 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 PTPRAP18433 802 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 ADD2P35612 726 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 DYNLL1P63167 89 aaKnown RBP12.44□□□□□ -0.42
RNF220-215ENST00000487332 UBE3CQ15386 1083 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms