RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 ENTPD3O75355 529 aa20.12■□□□□ 0.81
SRRT-212ENST00000487311 SCYL3Q8IZE3 742 aa20.12■□□□□ 0.81
SRRT-212ENST00000487311 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.12■□□□□ 0.81
SRRT-212ENST00000487311 GABRQQ9UN88 632 aa20.12■□□□□ 0.81
SRRT-212ENST00000487311 MYPNQ86TC9 1320 aa20.11■□□□□ 0.81
SRRT-212ENST00000487311 HOXD10P28358 340 aa20.11■□□□□ 0.81
SRRT-212ENST00000487311 GRK4P32298 578 aa20.11■□□□□ 0.81
SRRT-212ENST00000487311 RAET1EQ8TD07 263 aa20.11■□□□□ 0.81
SRRT-212ENST00000487311 ZNF384Q8TF68 577 aa20.11■□□□□ 0.81
SRRT-212ENST00000487311 FAM163AQ96GL9 167 aaPredicted RBP20.11■□□□□ 0.81
SRRT-212ENST00000487311 XAGE2Q96GT9 111 aa20.11■□□□□ 0.81
SRRT-212ENST00000487311 ABCF2Q9UG63 623 aa20.11■□□□□ 0.81
SRRT-212ENST00000487311 RFX7Q2KHR2 1363 aa20.1■□□□□ 0.81
SRRT-212ENST00000487311 A0A0G2JLL6 359 aaPredicted RBP20.1■□□□□ 0.81
SRRT-212ENST00000487311 PRKCZQ05513 592 aa20.1■□□□□ 0.81
SRRT-212ENST00000487311 TFCP2Q12800 502 aa20.1■□□□□ 0.81
SRRT-212ENST00000487311 PRRT2Q7Z6L0 340 aaPredicted RBP20.1■□□□□ 0.81
SRRT-212ENST00000487311 CCDC84Q86UT8 332 aaPredicted RBP20.1■□□□□ 0.81
SRRT-212ENST00000487311 ZSCAN29Q8IWY8 852 aaPredicted RBP20.1■□□□□ 0.81
SRRT-212ENST00000487311 API5Q9BZZ5 524 aaKnown RBP20.1■□□□□ 0.81
SRRT-212ENST00000487311 A0A1B0GUL7 405 aa20.09■□□□□ 0.81
SRRT-212ENST00000487311 CCL5P13501 91 aa20.09■□□□□ 0.81
SRRT-212ENST00000487311 BTDP43251 543 aa20.09■□□□□ 0.81
SRRT-212ENST00000487311 RARSP54136 660 aaKnown RBP20.09■□□□□ 0.81
SRRT-212ENST00000487311 PICALMQ13492 652 aa20.09■□□□□ 0.81
SRRT-212ENST00000487311 DZIP1Q86YF9 867 aaKnown RBP20.09■□□□□ 0.81
SRRT-212ENST00000487311 ZGPATQ8N5A5 531 aaKnown RBP20.09■□□□□ 0.81
SRRT-212ENST00000487311 PARK7Q99497 189 aaKnown RBP20.09■□□□□ 0.81
SRRT-212ENST00000487311 PICK1Q9NRD5 415 aa20.09■□□□□ 0.81
SRRT-212ENST00000487311 CT47B1P0C2W7 299 aaPredicted RBP20.08■□□□□ 0.81
SRRT-212ENST00000487311 RHBDL3P58872 404 aa20.08■□□□□ 0.81
SRRT-212ENST00000487311 MECOMQ03112 1051 aa20.08■□□□□ 0.81
SRRT-212ENST00000487311 GADL1Q6ZQY3 521 aa20.08■□□□□ 0.81
SRRT-212ENST00000487311 FASTKD5Q7L8L6 764 aaKnown RBP20.08■□□□□ 0.81
SRRT-212ENST00000487311 UBE2Q1Q7Z7E8 422 aa20.08■□□□□ 0.81
SRRT-212ENST00000487311 GPR75-ASB3A0A0A6YYF3 556 aa20.07■□□□□ 0.8
SRRT-212ENST00000487311 SRGAP3O43295 1099 aa20.07■□□□□ 0.8
SRRT-212ENST00000487311 CTNND1O60716 968 aaKnown RBP20.07■□□□□ 0.8
SRRT-212ENST00000487311 GJA8P48165 433 aa20.07■□□□□ 0.8
SRRT-212ENST00000487311 FCGRTP55899 365 aa20.07■□□□□ 0.8
SRRT-212ENST00000487311 PI16Q6UXB8 463 aa20.07■□□□□ 0.8
SRRT-212ENST00000487311 TBC1D9Q6ZT07 1266 aa20.07■□□□□ 0.8
SRRT-212ENST00000487311 RNF208Q9H0X6 261 aa20.07■□□□□ 0.8
SRRT-212ENST00000487311 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
SRRT-212ENST00000487311 PDS5AQ29RF7 1337 aaKnown RBP20.06■□□□□ 0.8
SRRT-212ENST00000487311 FAM196BA6NMK8 535 aa20.06■□□□□ 0.8
SRRT-212ENST00000487311 GJB1P08034 283 aa20.06■□□□□ 0.8
SRRT-212ENST00000487311 DPF3Q92784 378 aa20.06■□□□□ 0.8
SRRT-212ENST00000487311 NEUROD6Q96NK8 337 aa20.06■□□□□ 0.8
SRRT-212ENST00000487311 BIN2Q9UBW5 565 aaPredicted RBP20.06■□□□□ 0.8
SRRT-212ENST00000487311 HDAC5Q9UQL6 1122 aa20.06■□□□□ 0.8
SRRT-212ENST00000487311 SZT2Q5T011 3432 aa20.05■□□□□ 0.8
SRRT-212ENST00000487311 MROH7-TTC4A0A0A0MT08 1334 aa20.05■□□□□ 0.8
SRRT-212ENST00000487311 MGAMO43451 1857 aa20.05■□□□□ 0.8
SRRT-212ENST00000487311 DOCK2Q92608 1830 aa20.05■□□□□ 0.8
SRRT-212ENST00000487311 TRIM75PA6NK02 468 aa20.05■□□□□ 0.8
SRRT-212ENST00000487311 SPTY2D1Q68D10 685 aaPredicted RBP20.05■□□□□ 0.8
SRRT-212ENST00000487311 ERICH6Q7L0X2 663 aa20.05■□□□□ 0.8
SRRT-212ENST00000487311 UNC93B1Q9H1C4 597 aa20.05■□□□□ 0.8
SRRT-212ENST00000487311 HMG20BQ9P0W2 317 aa20.05■□□□□ 0.8
SRRT-212ENST00000487311 AKAP2Q9Y2D5 859 aa20.05■□□□□ 0.8
SRRT-212ENST00000487311 PHIPQ8WWQ0 1821 aa20.04■□□□□ 0.8
SRRT-212ENST00000487311 FLT3LGP49771 235 aa20.04■□□□□ 0.8
SRRT-212ENST00000487311 MTX1Q13505 466 aa20.04■□□□□ 0.8
SRRT-212ENST00000487311 RRP1BQ14684 758 aaKnown RBP20.04■□□□□ 0.8
SRRT-212ENST00000487311 SLF2Q8IX21 1173 aa20.04■□□□□ 0.8
SRRT-212ENST00000487311 ARHGAP45Q92619 1136 aa20.04■□□□□ 0.8
SRRT-212ENST00000487311 SLC45A1Q9Y2W3 748 aa20.04■□□□□ 0.8
SRRT-212ENST00000487311 ADCY3O60266 1144 aa20.03■□□□□ 0.8
SRRT-212ENST00000487311 TBC1D12O60347 775 aa20.03■□□□□ 0.8
SRRT-212ENST00000487311 ELNP15502 786 aa20.03■□□□□ 0.8
SRRT-212ENST00000487311 MVPQ14764 893 aaKnown RBP20.03■□□□□ 0.8
SRRT-212ENST00000487311 TREML2Q5T2D2 321 aa20.03■□□□□ 0.8
SRRT-212ENST00000487311 NKX2-3Q8TAU0 364 aa20.03■□□□□ 0.8
SRRT-212ENST00000487311 NSUN4Q96CB9 384 aaKnown RBP20.03■□□□□ 0.8
SRRT-212ENST00000487311 PTPRFP10586 1907 aa20.02■□□□□ 0.8
SRRT-212ENST00000487311 PNMA6EA0A0J9YXQ4 647 aa20.02■□□□□ 0.8
SRRT-212ENST00000487311 GNAI3P08754 354 aa20.02■□□□□ 0.8
SRRT-212ENST00000487311 UBXN2AP68543 259 aa20.02■□□□□ 0.8
SRRT-212ENST00000487311 CHRDL2Q6WN34 429 aa20.02■□□□□ 0.8
SRRT-212ENST00000487311 ANKRD13CQ8N6S4 541 aa20.02■□□□□ 0.8
SRRT-212ENST00000487311 SPATA5Q8NB90 893 aa20.02■□□□□ 0.8
SRRT-212ENST00000487311 SLAIN1Q8ND83 568 aa20.02■□□□□ 0.8
SRRT-212ENST00000487311 U2AF1L4Q8WU68 220 aaKnown RBP20.02■□□□□ 0.8
SRRT-212ENST00000487311 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.02■□□□□ 0.8
SRRT-212ENST00000487311 DOCK3Q8IZD9 2030 aa20.02■□□□□ 0.79
SRRT-212ENST00000487311 NPM3O75607 178 aaKnown RBP20.01■□□□□ 0.79
SRRT-212ENST00000487311 RBM27Q9P2N5 1060 aaKnown RBP20.01■□□□□ 0.79
SRRT-212ENST00000487311 AGTPBP1Q9UPW5 1226 aa20.01■□□□□ 0.79
SRRT-212ENST00000487311 SGPL1O95470 568 aa20■□□□□ 0.79
SRRT-212ENST00000487311 MCAMP43121 646 aa20■□□□□ 0.79
SRRT-212ENST00000487311 SPP2Q13103 211 aa20■□□□□ 0.79
SRRT-212ENST00000487311 SMCR8Q8TEV9 937 aaPredicted RBP20■□□□□ 0.79
SRRT-212ENST00000487311 DOCK1Q14185 1865 aa19.99■□□□□ 0.79
SRRT-212ENST00000487311 TNPO2O14787 897 aaKnown RBP19.99■□□□□ 0.79
SRRT-212ENST00000487311 BCAR3O75815 825 aa19.99■□□□□ 0.79
SRRT-212ENST00000487311 INHAP05111 366 aa19.99■□□□□ 0.79
SRRT-212ENST00000487311 TRIM27P14373 513 aa19.99■□□□□ 0.79
SRRT-212ENST00000487311 ARID4AP29374 1257 aaPredicted RBP19.99■□□□□ 0.79
SRRT-212ENST00000487311 OSBPL5Q9H0X9 879 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms