RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 KCNH3Q9ULD8 1083 aa14.26□□□□□ -0.13
TMEM39B-208ENST00000487305 ANKRD36CQ5JPF3 1778 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 SHANK3Q9BYB0 1731 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 APPP05067 770 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 PDE6AP16499 860 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 TMEM67Q5HYA8 995 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 SHC4Q6S5L8 630 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 NFXL1Q6ZNB6 911 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 NOSTRINQ8IVI9 506 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 CNNM3Q8NE01 707 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 FAM89AQ96GI7 184 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 MPHOSPH8Q99549 860 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 NBPF3Q9H094 633 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 RNF41Q9H4P4 317 aaPredicted RBP14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 TIAM2Q8IVF5 1701 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 ARAP2Q8WZ64 1704 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 LRP6O75581 1613 aa14.25□□□□□ -0.13
TMEM39B-208ENST00000487305 SOS2Q07890 1332 aaPredicted RBP14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 BMP15O95972 392 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 TOP1P11387 765 aaKnown RBP14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 TUBB4BP68371 445 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 TBC1D10CQ8IV04 446 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 LY9Q9HBG7 655 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 MROH7-TTC4A0A0A0MT08 1334 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 ZNF532Q9HCE3 1301 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 TCRBV5S4A2TA0A5A2 114 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 H2AFXP16104 143 aaPredicted RBP14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 CYB5R4Q7L1T6 521 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 HOMER1Q86YM7 354 aa14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 ENOX1Q8TC92 643 aaKnown RBP14.24□□□□□ -0.13
TMEM39B-208ENST00000487305 LRP5O75197 1615 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 PNPLA7Q6ZV29 1317 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 ERICH2A1L162 156 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 BIN1O00499 593 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 STX10O60499 249 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 SLC5A1P13866 664 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 ERCC5P28715 1186 aaPredicted RBP14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 LMOD1P29536 600 aaPredicted RBP14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 MARCKSP29966 332 aaPredicted RBP14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 CFAP100Q494V2 611 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 KMT5BQ4FZB7 885 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 NAPBQ9H115 298 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 DNAI1Q9UI46 699 aa14.23□□□□□ -0.13
TMEM39B-208ENST00000487305 IRS4O14654 1257 aaPredicted RBP14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 IDH1O75874 414 aaKnown RBP14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 DEXIO95424 95 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 MMP1P03956 469 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 PTPREP23469 700 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 AKNAD1Q5T1N1 836 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 HSD3B7Q9H2F3 369 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 PRDM10Q9NQV6 1147 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 UBN2Q6ZU65 1347 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 EFCAB8A8MWE9 144 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 IFIT3O14879 490 aaKnown RBP14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 XBP1P17861 261 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 FGFR2P21802 821 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 SYT10Q6XYQ8 523 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 MFSD6Q6ZSS7 791 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 NUTM2AQ8IVF1 878 aaPredicted RBP14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 STAG1Q8WVM7 1258 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 DDX17Q92841 729 aaKnown RBP14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 ERCC4Q92889 916 aaPredicted RBP14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 PIH1D3Q9NQM4 214 aaKnown RBP14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 STRCP1A6NGW2 1772 aa14.22□□□□□ -0.13
TMEM39B-208ENST00000487305 DOCK2Q92608 1830 aa14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 B4E1Z4 1266 aa14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 PCP11498 1178 aaKnown RBP14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 MDM2Q00987 491 aaPredicted RBP14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 TUBB2AQ13885 445 aa14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 MICU3Q86XE3 530 aa14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 IFNL3Q8IZI9 196 aa14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 UBXN4Q92575 508 aa14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 PYM1Q9BRP8 204 aaKnown RBP14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 TUBB2BQ9BVA1 445 aa14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 GREM2Q9H772 168 aa14.21□□□□□ -0.13
TMEM39B-208ENST00000487305 CHD4Q14839 1912 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 CDC27P30260 824 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 SARSP49591 514 aaKnown RBP14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 EVA1CP58658 441 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 TBX2Q13207 712 aaPredicted RBP14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 POSTNQ15063 836 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 ELF2Q15723 593 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 FBXO38Q6PIJ6 1188 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 BRINP3Q76B58 766 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 METTL16Q86W50 562 aaKnown RBP14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 DNAJC10Q8IXB1 793 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 SPATA5Q8NB90 893 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 FBXW7Q969H0 707 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 NAA15Q9BXJ9 866 aaKnown RBP14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 FAM217BQ9NTX9 383 aaPredicted RBP14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 PCDHA5Q9Y5H7 936 aa14.21□□□□□ -0.14
TMEM39B-208ENST00000487305 IL6STP40189 918 aaPredicted RBP14.2□□□□□ -0.14
TMEM39B-208ENST00000487305 RTN1Q16799 776 aa14.2□□□□□ -0.14
TMEM39B-208ENST00000487305 SPECC1LQ69YQ0 1117 aa14.2□□□□□ -0.14
TMEM39B-208ENST00000487305 MNS1Q8NEH6 495 aa14.2□□□□□ -0.14
TMEM39B-208ENST00000487305 SMARCE1Q969G3 411 aa14.2□□□□□ -0.14
TMEM39B-208ENST00000487305 SLC26A6Q9BXS9 759 aa14.2□□□□□ -0.14
TMEM39B-208ENST00000487305 SRPRBQ9Y5M8 271 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms