RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 SLC4A5Q9BY07 1137 aa8.84□□□□□ -0.99
UBE4B-209ENST00000487244 TDRD3Q9H7E2 651 aaKnown RBP8.84□□□□□ -0.99
UBE4B-209ENST00000487244 GBA2Q9HCG7 927 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-209ENST00000487244 TLR7Q9NYK1 1049 aaKnown RBP8.84□□□□□ -0.99
UBE4B-209ENST00000487244 SERPINA10Q9UK55 444 aa8.84□□□□□ -0.99
UBE4B-209ENST00000487244 FZD1Q9UP38 647 aa8.84□□□□□ -0.99
UBE4B-209ENST00000487244 VPS9D1Q9Y2B5 631 aa8.84□□□□□ -0.99
UBE4B-209ENST00000487244 AKAP2Q9Y2D5 859 aa8.84□□□□□ -0.99
UBE4B-209ENST00000487244 NOP58Q9Y2X3 529 aaKnown RBP8.84□□□□□ -0.99
UBE4B-209ENST00000487244 WDR33Q9C0J8 1336 aaKnown RBP8.83□□□□□ -1
UBE4B-209ENST00000487244 AOC2O75106 756 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 OSBPP22059 807 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 MMP14P50281 582 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 CACNB3P54284 484 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 RRP1P56182 461 aaKnown RBP8.83□□□□□ -1
UBE4B-209ENST00000487244 HUNKP57058 714 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 DIXDC1Q155Q3 683 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 TNNI3KQ59H18 835 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 APOBEC3FQ8IUX4 373 aaKnown RBP8.83□□□□□ -1
UBE4B-209ENST00000487244 WDR66Q8TBY9 1149 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 DBNDD2Q9BQY9 259 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 VEZTQ9HBM0 779 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 ZNF70Q9UC06 446 aaPredicted RBP8.83□□□□□ -1
UBE4B-209ENST00000487244 FPGT-TNNI3KV9GXZ4 949 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 MAST2Q6P0Q8 1798 aa8.83□□□□□ -1
UBE4B-209ENST00000487244 AK9Q5TCS8 1911 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 APBB1O00213 710 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 SEMA3EO15041 775 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 HSPA1AP0DMV8 641 aaKnown RBP8.82□□□□□ -1
UBE4B-209ENST00000487244 HSPA1BP0DMV9 641 aaKnown RBP8.82□□□□□ -1
UBE4B-209ENST00000487244 COL9A1P20849 921 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 ARID4AP29374 1257 aaPredicted RBP8.82□□□□□ -1
UBE4B-209ENST00000487244 MLLT3P42568 568 aaPredicted RBP8.82□□□□□ -1
UBE4B-209ENST00000487244 MCAMP43121 646 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 PRKG1Q13976 671 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 APOBEC3HQ6NTF7 200 aaKnown RBP8.82□□□□□ -1
UBE4B-209ENST00000487244 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.82□□□□□ -1
UBE4B-209ENST00000487244 TEKT1Q969V4 418 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 EAF2Q96CJ1 260 aaPredicted RBP8.82□□□□□ -1
UBE4B-209ENST00000487244 ZIC5Q96T25 663 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 ZBED2Q9BTP6 218 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 DEFB129Q9H1M3 183 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 GNL3LQ9NVN8 582 aaKnown RBP8.82□□□□□ -1
UBE4B-209ENST00000487244 HMG20BQ9P0W2 317 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 DBNLQ9UJU6 430 aaKnown RBP8.82□□□□□ -1
UBE4B-209ENST00000487244 DENND2AQ9ULE3 1009 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 DAGLAQ9Y4D2 1042 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 CDK5RAP2Q96SN8 1893 aa8.82□□□□□ -1
UBE4B-209ENST00000487244 SALL1Q9NSC2 1324 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 FAM155AB1AL88 458 aaPredicted RBP8.81□□□□□ -1
UBE4B-209ENST00000487244 TCP10L2B9ZVM9 353 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 UBE2Q2LH0YL09 131 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 MYO1BO43795 1136 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 LDHBP07195 334 aaKnown RBP8.81□□□□□ -1
UBE4B-209ENST00000487244 HDLBPQ00341 1268 aaKnown RBP8.81□□□□□ -1
UBE4B-209ENST00000487244 RASA3Q14644 834 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
UBE4B-209ENST00000487244 GORABQ5T7V8 394 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 TBC1D9Q6ZT07 1266 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 C2orf69Q8N8R5 385 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 SPATA5Q8NB90 893 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 ZNF384Q8TF68 577 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 HHIPL1Q96JK4 782 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 ZDHHC15Q96MV8 337 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 TMEM39BQ9GZU3 492 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 CCDC8Q9H0W5 538 aaPredicted RBP8.81□□□□□ -1
UBE4B-209ENST00000487244 IL1RAPL2Q9NP60 686 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 GPR108Q9NPR9 543 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 SNRKQ9NRH2 765 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 SUGT1Q9Y2Z0 365 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 DOCK2Q92608 1830 aa8.81□□□□□ -1
UBE4B-209ENST00000487244 MAST3O60307 1309 aa8.8□□□□□ -1
UBE4B-209ENST00000487244 PDS5AQ29RF7 1337 aaKnown RBP8.8□□□□□ -1
UBE4B-209ENST00000487244 NBPF12Q5TAG4 269 aaPredicted RBP8.8□□□□□ -1
UBE4B-209ENST00000487244 RGMBQ6NW40 437 aa8.8□□□□□ -1
UBE4B-209ENST00000487244 HHIPL2Q6UWX4 724 aa8.8□□□□□ -1
UBE4B-209ENST00000487244 RPAP2Q8IXW5 612 aaPredicted RBP8.8□□□□□ -1
UBE4B-209ENST00000487244 TEPSINQ96N21 525 aa8.8□□□□□ -1
UBE4B-209ENST00000487244 BCL11AQ9H165 835 aa8.8□□□□□ -1
UBE4B-209ENST00000487244 ABCF2Q9UG63 623 aa8.8□□□□□ -1
UBE4B-209ENST00000487244 NDUFB9Q9Y6M9 179 aa8.8□□□□□ -1
UBE4B-209ENST00000487244 LAMB1P07942 1786 aa8.8□□□□□ -1
UBE4B-209ENST00000487244 RFX7Q2KHR2 1363 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 FOXN1O15353 648 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 HRO43593 1189 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 ECE1P42892 770 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 ZNF157P51786 506 aaPredicted RBP8.79□□□□□ -1
UBE4B-209ENST00000487244 MECOMQ03112 1051 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 NFIAQ12857 509 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
UBE4B-209ENST00000487244 TTC39AQ5SRH9 613 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 CDC42EP5Q6NZY7 148 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 AACSQ86V21 672 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 DZIP1Q86YF9 867 aaKnown RBP8.79□□□□□ -1
UBE4B-209ENST00000487244 RASAL3Q86YV0 1011 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 RHPN1Q8TCX5 695 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 RNF166Q96A37 237 aaPredicted RBP8.79□□□□□ -1
UBE4B-209ENST00000487244 CRBNQ96SW2 442 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 MRIQ9BWK5 157 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 WBP1LQ9NX94 342 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms