RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 SH3BP5LQ7L8J4 393 aa15.98■□□□□ 0.15
SF1-216ENST00000486867 ZFPM1Q8IX07 1006 aa15.98■□□□□ 0.15
SF1-216ENST00000486867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.98■□□□□ 0.151e-14■■□□□ 12.5
SF1-216ENST00000486867 ANGEL1Q9UNK9 670 aaKnown RBP15.98■□□□□ 0.15
SF1-216ENST00000486867 MYH8P13535 1937 aa15.98■□□□□ 0.15
SF1-216ENST00000486867 ERC2O15083 957 aa15.97■□□□□ 0.15
SF1-216ENST00000486867 ADD2P35612 726 aa15.97■□□□□ 0.15
SF1-216ENST00000486867 IREB2P48200 963 aaKnown RBP15.97■□□□□ 0.15
SF1-216ENST00000486867 TCP10Q12799 353 aa15.97■□□□□ 0.15
SF1-216ENST00000486867 SLC9C2Q5TAH2 1124 aa15.97■□□□□ 0.15
SF1-216ENST00000486867 RASAL3Q86YV0 1011 aa15.97■□□□□ 0.15
SF1-216ENST00000486867 SH3RF3Q8TEJ3 882 aaPredicted RBP15.97■□□□□ 0.15
SF1-216ENST00000486867 RIOK1Q9BRS2 568 aaKnown RBP15.97■□□□□ 0.15
SF1-216ENST00000486867 NOL10Q9BSC4 688 aaKnown RBP15.97■□□□□ 0.15
SF1-216ENST00000486867 AATFQ9NY61 560 aaKnown RBP eCLIP15.97■□□□□ 0.154e-7■■■□□ 15.2
SF1-216ENST00000486867 ZNF112Q9UJU3 913 aa15.97■□□□□ 0.15
SF1-216ENST00000486867 ZNF157P51786 506 aaPredicted RBP15.96■□□□□ 0.15
SF1-216ENST00000486867 PDE1AP54750 535 aa15.96■□□□□ 0.15
SF1-216ENST00000486867 UBE3CQ15386 1083 aa15.96■□□□□ 0.15
SF1-216ENST00000486867 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.96■□□□□ 0.15
SF1-216ENST00000486867 CHD1LQ86WJ1 897 aa15.96■□□□□ 0.15
SF1-216ENST00000486867 TEX11Q8IYF3 940 aa15.96■□□□□ 0.15
SF1-216ENST00000486867 ANKRD13AQ8IZ07 590 aa15.96■□□□□ 0.15
SF1-216ENST00000486867 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.15
SF1-216ENST00000486867 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.96■□□□□ 0.159e-7■□□□□ 9.6
SF1-216ENST00000486867 OSBPL5Q9H0X9 879 aaPredicted RBP15.96■□□□□ 0.15
SF1-216ENST00000486867 FZD1Q9UP38 647 aa15.96■□□□□ 0.15
SF1-216ENST00000486867 ZNF532Q9HCE3 1301 aa15.95■□□□□ 0.14
SF1-216ENST00000486867 DDTLA6NHG4 134 aaPredicted RBP15.95■□□□□ 0.14
SF1-216ENST00000486867 TBC1D12O60347 775 aa15.95■□□□□ 0.14
SF1-216ENST00000486867 TTLL12Q14166 644 aaPredicted RBP15.95■□□□□ 0.14
SF1-216ENST00000486867 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
SF1-216ENST00000486867 DCAF15Q66K64 600 aa15.95■□□□□ 0.14
SF1-216ENST00000486867 METTL16Q86W50 562 aaKnown RBP15.95■□□□□ 0.14
SF1-216ENST00000486867 TICAM2Q86XR7 235 aa15.95■□□□□ 0.14
SF1-216ENST00000486867 OSBPL3Q9H4L5 887 aa15.95■□□□□ 0.14
SF1-216ENST00000486867 AOC2O75106 756 aa15.94■□□□□ 0.14
SF1-216ENST00000486867 DYNLL1P63167 89 aaKnown RBP15.94■□□□□ 0.14
SF1-216ENST00000486867 CLMNQ96JQ2 1002 aa15.94■□□□□ 0.14
SF1-216ENST00000486867 LNPKQ9C0E8 428 aa15.94■□□□□ 0.14
SF1-216ENST00000486867 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
SF1-216ENST00000486867 WBP1LQ9NX94 342 aa15.94■□□□□ 0.14
SF1-216ENST00000486867 ZBTB47Q9UFB7 747 aaPredicted RBP15.94■□□□□ 0.14
SF1-216ENST00000486867 FLT1P17948 1338 aa15.94■□□□□ 0.14
SF1-216ENST00000486867 PHF20L1A8MW92 1017 aa15.93■□□□□ 0.14
SF1-216ENST00000486867 MAP3K9P80192 1104 aa15.93■□□□□ 0.14
SF1-216ENST00000486867 PRKG1Q13976 671 aa15.93■□□□□ 0.14
SF1-216ENST00000486867 NOL9Q5SY16 702 aaKnown RBP15.93■□□□□ 0.14
SF1-216ENST00000486867 ZSCAN25Q6NSZ9 544 aa15.93■□□□□ 0.14
SF1-216ENST00000486867 REM2Q8IYK8 340 aaPredicted RBP15.93■□□□□ 0.14
SF1-216ENST00000486867 MIGA1Q8NAN2 632 aa15.93■□□□□ 0.14
SF1-216ENST00000486867 CSRNP1Q96S65 589 aa15.93■□□□□ 0.14
SF1-216ENST00000486867 ZIC5Q96T25 663 aa15.93■□□□□ 0.14
SF1-216ENST00000486867 ZNF341Q9BYN7 854 aa15.93■□□□□ 0.14
SF1-216ENST00000486867 DHX36Q9H2U1 1008 aaKnown RBP15.93■□□□□ 0.14
SF1-216ENST00000486867 MAGEB6P1A0A0J9YX57 407 aa15.92■□□□□ 0.14
SF1-216ENST00000486867 ZFYP08048 801 aaPredicted RBP15.92■□□□□ 0.14
SF1-216ENST00000486867 ZBTB48P10074 688 aaPredicted RBP15.92■□□□□ 0.14
SF1-216ENST00000486867 MAP2K1Q02750 393 aaPredicted RBP15.92■□□□□ 0.14
SF1-216ENST00000486867 PICALMQ13492 652 aa15.92■□□□□ 0.14
SF1-216ENST00000486867 VGLL4Q14135 290 aa15.92■□□□□ 0.14
SF1-216ENST00000486867 SPRYD7Q5W111 196 aa15.92■□□□□ 0.14
SF1-216ENST00000486867 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
SF1-216ENST00000486867 PLEKHM2Q8IWE5 1019 aa15.92■□□□□ 0.14
SF1-216ENST00000486867 TGFBRAP1Q8WUH2 860 aa15.92■□□□□ 0.14
SF1-216ENST00000486867 SLC10A4Q96EP9 437 aa15.92■□□□□ 0.14
SF1-216ENST00000486867 SNCAIPQ9Y6H5 919 aa15.92■□□□□ 0.14
SF1-216ENST00000486867 WNK4Q96J92 1243 aa15.91■□□□□ 0.14
SF1-216ENST00000486867 WRNIP1Q96S55 665 aa15.91■□□□□ 0.14
SF1-216ENST00000486867 CHGBP05060 677 aa15.9■□□□□ 0.14
SF1-216ENST00000486867 GJA5P36382 358 aa15.9■□□□□ 0.14
SF1-216ENST00000486867 KIF23Q02241 960 aaPredicted RBP15.9■□□□□ 0.14
SF1-216ENST00000486867 SLFNL1Q499Z3 407 aa15.9■□□□□ 0.14
SF1-216ENST00000486867 B4GALNT3Q6L9W6 998 aa15.9■□□□□ 0.14
SF1-216ENST00000486867 MIGA2Q7L4E1 593 aa15.9■□□□□ 0.14
SF1-216ENST00000486867 APPBP2Q92624 585 aa15.9■□□□□ 0.14
SF1-216ENST00000486867 PI4KBQ9UBF8 816 aa15.9■□□□□ 0.14
SF1-216ENST00000486867 HERC5Q9UII4 1024 aaKnown RBP15.9■□□□□ 0.14
SF1-216ENST00000486867 SPDYE5A6NIY4 337 aa15.89■□□□□ 0.13
SF1-216ENST00000486867 RNF113AO15541 343 aaKnown RBP15.89■□□□□ 0.13
SF1-216ENST00000486867 HSPA1AP0DMV8 641 aaKnown RBP15.89■□□□□ 0.13
SF1-216ENST00000486867 HSPA1BP0DMV9 641 aaKnown RBP15.89■□□□□ 0.13
SF1-216ENST00000486867 INPP5BP32019 993 aa15.89■□□□□ 0.13
SF1-216ENST00000486867 TM4SF4P48230 202 aa15.89■□□□□ 0.13
SF1-216ENST00000486867 LRRFIP1Q32MZ4 808 aaKnown RBP15.89■□□□□ 0.13
SF1-216ENST00000486867 MAPKAPK5Q8IW41 473 aa15.89■□□□□ 0.13
SF1-216ENST00000486867 ZSCAN29Q8IWY8 852 aaPredicted RBP15.89■□□□□ 0.13
SF1-216ENST00000486867 LCORLQ8N3X6 602 aa15.89■□□□□ 0.13
SF1-216ENST00000486867 CRNKL1Q9BZJ0 848 aaKnown RBP15.89■□□□□ 0.13
SF1-216ENST00000486867 PUS7LQ9H0K6 701 aaKnown RBP15.89■□□□□ 0.13
SF1-216ENST00000486867 EHD4Q9H223 541 aa15.89■□□□□ 0.13
SF1-216ENST00000486867 TAOK2Q9UL54 1235 aa15.89■□□□□ 0.13
SF1-216ENST00000486867 CSADQ9Y600 493 aa15.89■□□□□ 0.13
SF1-216ENST00000486867 LOC285556D6RIA3 1793 aa15.88■□□□□ 0.13
SF1-216ENST00000486867 TESPA1A2RU30 521 aaPredicted RBP15.88■□□□□ 0.13
SF1-216ENST00000486867 CA12O43570 354 aa15.88■□□□□ 0.13
SF1-216ENST00000486867 MBD4O95243 580 aa15.88■□□□□ 0.13
SF1-216ENST00000486867 PDE4AP27815 886 aa15.88■□□□□ 0.13
SF1-216ENST00000486867 GRM1Q13255 1194 aa15.88■□□□□ 0.13
SF1-216ENST00000486867 ERO1BQ86YB8 467 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms