RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MED15Q96RN5 788 aa12.14□□□□□ -0.47
CCDC171-208ENST00000486641 TSPOAP1O95153 1857 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 PIP4K2BP78356 416 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 WDR93Q6P2C0 686 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 RASGRP2Q7LDG7 609 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 RIN2Q8WYP3 895 aaPredicted RBP12.13□□□□□ -0.47
CCDC171-208ENST00000486641 VIPAS39Q9H9C1 493 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 HELLSQ9NRZ9 838 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 MAN1B1Q9UKM7 699 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 NEO1Q92859 1461 aa12.13□□□□□ -0.47
CCDC171-208ENST00000486641 TUBBP07437 444 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 CCDC172P0C7W6 258 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 HNRNPH1P31943 449 aaKnown RBP12.12□□□□□ -0.47
CCDC171-208ENST00000486641 WHAMMP3Q1A5X7 153 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 ENOX1Q8TC92 643 aaKnown RBP12.12□□□□□ -0.47
CCDC171-208ENST00000486641 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 MED1Q15648 1581 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-208ENST00000486641 CDHR2Q9BYE9 1310 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 KLF18A0A0U1RQI7 1052 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 APPP05067 770 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 NLRP6P59044 892 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 ZNF827Q17R98 1081 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 NCAPH2Q6IBW4 605 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 RICTORQ6R327 1708 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 FBXL16Q8N461 479 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 CTCFLQ8NI51 663 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-208ENST00000486641 PTPRUQ92729 1446 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 AIFM3Q96NN9 605 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 MAP3K14Q99558 947 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 NAPGQ99747 312 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-208ENST00000486641 FAM107BQ9H098 131 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 RNF216Q9NWF9 866 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-208ENST00000486641 TAOK2Q9UL54 1235 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 HPCAL4Q9UM19 191 aa12.12□□□□□ -0.47
CCDC171-208ENST00000486641 A0A1B0GTH6 734 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 CCT5P48643 541 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 MNAT1P51948 309 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 PTPN12Q05209 780 aaKnown RBP12.11□□□□□ -0.47
CCDC171-208ENST00000486641 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 FBXW10Q5XX13 1052 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 JMYQ8N9B5 988 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 ANKRD24Q8TF21 1146 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 NAA15Q9BXJ9 866 aaKnown RBP12.11□□□□□ -0.47
CCDC171-208ENST00000486641 COPRSQ9NQ92 184 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 CEP83Q9Y592 693 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 FAM169AQ9Y6X4 670 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 ZC3H4Q9UPT8 1303 aaKnown RBP12.11□□□□□ -0.47
CCDC171-208ENST00000486641 GOLGA8BA8MQT2 603 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 GOLIM4O00461 696 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 CPLX1O14810 134 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 MAP2K2P36507 400 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 RFX5P48382 616 aaPredicted RBP12.11□□□□□ -0.47
CCDC171-208ENST00000486641 SLC9C2Q5TAH2 1124 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 KCNV1Q6PIU1 500 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 MPRIPQ6WCQ1 1025 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 PPFIBP1Q86W92 1011 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
CCDC171-208ENST00000486641 ANKRD20A12PQ8NF67 263 aa12.11□□□□□ -0.47
CCDC171-208ENST00000486641 SHOX2O60902 331 aaPredicted RBP12.1□□□□□ -0.47
CCDC171-208ENST00000486641 AKAP17AQ02040 695 aaKnown RBP12.1□□□□□ -0.47
CCDC171-208ENST00000486641 ZMYM1Q5SVZ6 1142 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.1□□□□□ -0.47
CCDC171-208ENST00000486641 EP400NLQ6ZTU2 488 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 VPS37DQ86XT2 251 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 MLKLQ8NB16 471 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 NGDNQ8NEJ9 315 aaKnown RBP12.1□□□□□ -0.47
CCDC171-208ENST00000486641 SMARCC1Q92922 1105 aaPredicted RBP12.1□□□□□ -0.47
CCDC171-208ENST00000486641 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 HOOK1Q9UJC3 728 aaKnown RBP12.1□□□□□ -0.47
CCDC171-208ENST00000486641 MYO6Q9UM54 1294 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 CLGNO14967 610 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
CCDC171-208ENST00000486641 GGCXP38435 758 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 IRAK1P51617 712 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 AMPD2Q01433 879 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
CCDC171-208ENST00000486641 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 GDAP1L1Q96MZ0 367 aa12.1□□□□□ -0.47
CCDC171-208ENST00000486641 EBAG9O00559 213 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 PRC1O43663 620 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
CCDC171-208ENST00000486641 CASP14P31944 242 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 SARSP49591 514 aaKnown RBP12.09□□□□□ -0.47
CCDC171-208ENST00000486641 USP14P54578 494 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 HAND2P61296 217 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 STIM1Q13586 685 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 MORC3Q14149 939 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 POSTNQ15063 836 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 EHD4Q9H223 541 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 PAG1Q9NWQ8 432 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 DONSONQ9NYP3 566 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 TTF2Q9UNY4 1162 aaKnown RBP12.09□□□□□ -0.47
CCDC171-208ENST00000486641 ANKARQ7Z5J8 1434 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 MAST3O60307 1309 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 NEURL1BA8MQ27 555 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms