RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 COL2A1P02458 1487 aaPredicted RBP22.09■■□□□ 1.13
COL1A1-207ENST00000486572 IRX6P78412 446 aaPredicted RBP22.09■■□□□ 1.13
COL1A1-207ENST00000486572 SLC9C2Q5TAH2 1124 aa22.09■■□□□ 1.13
COL1A1-207ENST00000486572 CERS3Q8IU89 383 aa22.09■■□□□ 1.13
COL1A1-207ENST00000486572 ZSCAN29Q8IWY8 852 aaPredicted RBP22.09■■□□□ 1.13
COL1A1-207ENST00000486572 CSRNP1Q96S65 589 aa22.09■■□□□ 1.13
COL1A1-207ENST00000486572 ZNF341Q9BYN7 854 aa22.09■■□□□ 1.13
COL1A1-207ENST00000486572 PDE6AP16499 860 aa22.08■■□□□ 1.13
COL1A1-207ENST00000486572 MAP3K9P80192 1104 aa22.08■■□□□ 1.13
COL1A1-207ENST00000486572 ANKRD45Q5TZF3 282 aa22.08■■□□□ 1.13
COL1A1-207ENST00000486572 SPRYD7Q5W111 196 aa22.08■■□□□ 1.13
COL1A1-207ENST00000486572 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.08■■□□□ 1.13
COL1A1-207ENST00000486572 MIGA2Q7L4E1 593 aa22.08■■□□□ 1.13
COL1A1-207ENST00000486572 SH3BP5LQ7L8J4 393 aa22.08■■□□□ 1.13
COL1A1-207ENST00000486572 REM2Q8IYK8 340 aaPredicted RBP22.08■■□□□ 1.13
COL1A1-207ENST00000486572 MIGA1Q8NAN2 632 aa22.08■■□□□ 1.13
COL1A1-207ENST00000486572 WRNIP1Q96S55 665 aa22.08■■□□□ 1.13
COL1A1-207ENST00000486572 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.08■■□□□ 1.13
COL1A1-207ENST00000486572 ATRNL1Q5VV63 1379 aa22.08■■□□□ 1.12
COL1A1-207ENST00000486572 AK9Q5TCS8 1911 aa22.08■■□□□ 1.12
COL1A1-207ENST00000486572 TTC41PQ6P2S7 1318 aa22.07■■□□□ 1.12
COL1A1-207ENST00000486572 DDTLA6NHG4 134 aaPredicted RBP22.07■■□□□ 1.12
COL1A1-207ENST00000486572 FOXN1O15353 648 aa22.07■■□□□ 1.12
COL1A1-207ENST00000486572 VGLL4Q14135 290 aa22.07■■□□□ 1.12
COL1A1-207ENST00000486572 TSHZ3Q63HK5 1081 aa22.07■■□□□ 1.12
COL1A1-207ENST00000486572 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.07■■□□□ 1.12
COL1A1-207ENST00000486572 OSBPL5Q9H0X9 879 aaPredicted RBP22.07■■□□□ 1.12
COL1A1-207ENST00000486572 CSADQ9Y600 493 aa22.07■■□□□ 1.12
COL1A1-207ENST00000486572 FOCADQ5VW36 1801 aa22.06■■□□□ 1.12
COL1A1-207ENST00000486572 ZBTB48P10074 688 aaPredicted RBP22.06■■□□□ 1.12
COL1A1-207ENST00000486572 DYNLL1P63167 89 aaKnown RBP22.06■■□□□ 1.12
COL1A1-207ENST00000486572 MKRN3Q13064 507 aaKnown RBP22.06■■□□□ 1.12
COL1A1-207ENST00000486572 SMC5Q8IY18 1101 aa22.06■■□□□ 1.12
COL1A1-207ENST00000486572 OTUD7AQ8TE49 926 aaPredicted RBP22.06■■□□□ 1.12
COL1A1-207ENST00000486572 WNK4Q96J92 1243 aa22.06■■□□□ 1.12
COL1A1-207ENST00000486572 ELP3Q9H9T3 547 aa22.06■■□□□ 1.12
COL1A1-207ENST00000486572 ZNF532Q9HCE3 1301 aa22.06■■□□□ 1.12
COL1A1-207ENST00000486572 CDK5RAP2Q96SN8 1893 aa22.05■■□□□ 1.12
COL1A1-207ENST00000486572 CA12O43570 354 aa22.05■■□□□ 1.12
COL1A1-207ENST00000486572 MX1P20591 662 aa22.05■■□□□ 1.12
COL1A1-207ENST00000486572 TGFBRAP1Q8WUH2 860 aa22.05■■□□□ 1.12
COL1A1-207ENST00000486572 FLT1P17948 1338 aa22.05■■□□□ 1.12
COL1A1-207ENST00000486572 TCRBV5S4A2TA0A5A2 114 aa22.04■■□□□ 1.12
COL1A1-207ENST00000486572 ERC2O15083 957 aa22.04■■□□□ 1.12
COL1A1-207ENST00000486572 IGHDP01880 384 aa22.04■■□□□ 1.12
COL1A1-207ENST00000486572 CTCFP49711 727 aaPredicted RBP22.04■■□□□ 1.12
COL1A1-207ENST00000486572 ZNF112Q9UJU3 913 aa22.04■■□□□ 1.12
COL1A1-207ENST00000486572 LAMB1P07942 1786 aa22.04■■□□□ 1.12
COL1A1-207ENST00000486572 SALL3Q9BXA9 1300 aa22.04■■□□□ 1.12
COL1A1-207ENST00000486572 MAGEB6P1A0A0J9YX57 407 aa22.03■■□□□ 1.12
COL1A1-207ENST00000486572 ADD2P35612 726 aa22.03■■□□□ 1.12
COL1A1-207ENST00000486572 SREBF2Q12772 1141 aa22.03■■□□□ 1.12
COL1A1-207ENST00000486572 MAPKAPK5Q8IW41 473 aa22.03■■□□□ 1.12
COL1A1-207ENST00000486572 PI4K2BQ8TCG2 481 aa22.03■■□□□ 1.12
COL1A1-207ENST00000486572 ZKSCAN4Q969J2 545 aaPredicted RBP22.03■■□□□ 1.12
COL1A1-207ENST00000486572 OPTNQ96CV9 577 aa22.03■■□□□ 1.12
COL1A1-207ENST00000486572 RIOK1Q9BRS2 568 aaKnown RBP22.03■■□□□ 1.12
COL1A1-207ENST00000486572 SNCAIPQ9Y6H5 919 aa22.03■■□□□ 1.12
COL1A1-207ENST00000486572 GLRX3O76003 335 aaKnown RBP22.02■■□□□ 1.12
COL1A1-207ENST00000486572 INPP5BP32019 993 aa22.02■■□□□ 1.12
COL1A1-207ENST00000486572 MAP3K10Q02779 954 aa22.02■■□□□ 1.12
COL1A1-207ENST00000486572 ZSCAN25Q6NSZ9 544 aa22.02■■□□□ 1.12
COL1A1-207ENST00000486572 DHX36Q9H2U1 1008 aaKnown RBP22.02■■□□□ 1.12
COL1A1-207ENST00000486572 MYH7P12883 1935 aa22.02■■□□□ 1.11
COL1A1-207ENST00000486572 MANSC4A6NHS7 340 aaPredicted RBP22.01■■□□□ 1.11
COL1A1-207ENST00000486572 SPDYE5A6NIY4 337 aa22.01■■□□□ 1.11
COL1A1-207ENST00000486572 HSPA8P11142 646 aaKnown RBP22.01■■□□□ 1.11
COL1A1-207ENST00000486572 GJA5P36382 358 aa22.01■■□□□ 1.11
COL1A1-207ENST00000486572 USP5P45974 858 aa22.01■■□□□ 1.11
COL1A1-207ENST00000486572 KBTBD3Q8NAB2 608 aa22.01■■□□□ 1.11
COL1A1-207ENST00000486572 SAGE1Q9NXZ1 904 aa22.01■■□□□ 1.11
COL1A1-207ENST00000486572 TBC1D12O60347 775 aa22■■□□□ 1.11
COL1A1-207ENST00000486572 TM4SF4P48230 202 aa22■■□□□ 1.11
COL1A1-207ENST00000486572 UBE3CQ15386 1083 aa22■■□□□ 1.11
COL1A1-207ENST00000486572 NOL9Q5SY16 702 aaKnown RBP22■■□□□ 1.11
COL1A1-207ENST00000486572 B4GALNT3Q6L9W6 998 aa22■■□□□ 1.11
COL1A1-207ENST00000486572 ERO1BQ86YB8 467 aa22■■□□□ 1.11
COL1A1-207ENST00000486572 CNKSR2Q8WXI2 1034 aa22■■□□□ 1.11
COL1A1-207ENST00000486572 OTUD5Q96G74 571 aa22■■□□□ 1.11
COL1A1-207ENST00000486572 LNPKQ9C0E8 428 aa22■■□□□ 1.11
COL1A1-207ENST00000486572 PHF20L1A8MW92 1017 aa21.99■■□□□ 1.11
COL1A1-207ENST00000486572 CRNKL1Q9BZJ0 848 aaKnown RBP21.99■■□□□ 1.11
COL1A1-207ENST00000486572 RNF186Q9NXI6 227 aa21.99■■□□□ 1.11
COL1A1-207ENST00000486572 PI4KBQ9UBF8 816 aa21.99■■□□□ 1.11
COL1A1-207ENST00000486572 SLURP2P0DP57 97 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 LBX1P52954 281 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 INHBEP58166 350 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 NUCB1Q02818 461 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 SLFNL1Q499Z3 407 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 CHD1LQ86WJ1 897 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 LCORLQ8N3X6 602 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.98■■□□□ 1.11
COL1A1-207ENST00000486572 STAP2Q9UGK3 403 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 SAP30BPQ9UHR5 308 aaKnown RBP21.98■■□□□ 1.11
COL1A1-207ENST00000486572 HERC5Q9UII4 1024 aaKnown RBP21.98■■□□□ 1.11
COL1A1-207ENST00000486572 TSKSQ9UJT2 592 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 PALD1Q9ULE6 856 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 SIPA1L1O43166 1804 aa21.98■■□□□ 1.11
COL1A1-207ENST00000486572 DDX60LQ5H9U9 1706 aaKnown RBP21.97■■□□□ 1.11
COL1A1-207ENST00000486572 FAM196BA6NMK8 535 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms