RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 GJB1P08034 283 aa21.76■■□□□ 1.07
MCF2L-226ENST00000486210 HOXD10P28358 340 aa21.76■■□□□ 1.07
MCF2L-226ENST00000486210 TCP10Q12799 353 aa21.76■■□□□ 1.07
MCF2L-226ENST00000486210 NFIAQ12857 509 aa21.76■■□□□ 1.07
MCF2L-226ENST00000486210 NOL9Q5SY16 702 aaKnown RBP21.76■■□□□ 1.07
MCF2L-226ENST00000486210 GPAT2Q6NUI2 795 aa21.76■■□□□ 1.07
MCF2L-226ENST00000486210 NKX2-3Q8TAU0 364 aa21.76■■□□□ 1.07
MCF2L-226ENST00000486210 DAGLAQ9Y4D2 1042 aa21.76■■□□□ 1.07
MCF2L-226ENST00000486210 DOCK2Q92608 1830 aa21.76■■□□□ 1.07
MCF2L-226ENST00000486210 IFIT1P09914 478 aaKnown RBP21.75■■□□□ 1.07
MCF2L-226ENST00000486210 BCRP11274 1271 aa21.75■■□□□ 1.07
MCF2L-226ENST00000486210 PRKCZQ05513 592 aa21.75■■□□□ 1.07
MCF2L-226ENST00000486210 PUM3Q15397 648 aaKnown RBP21.75■■□□□ 1.07
MCF2L-226ENST00000486210 CDC42EP5Q6NZY7 148 aa21.75■■□□□ 1.07
MCF2L-226ENST00000486210 HDAC5Q9UQL6 1122 aa21.75■■□□□ 1.07
MCF2L-226ENST00000486210 PTPRFP10586 1907 aa21.74■■□□□ 1.07
MCF2L-226ENST00000486210 CYP2C8P10632 490 aa21.74■■□□□ 1.07
MCF2L-226ENST00000486210 DIXDC1Q155Q3 683 aa21.74■■□□□ 1.07
MCF2L-226ENST00000486210 RNF208Q9H0X6 261 aa21.74■■□□□ 1.07
MCF2L-226ENST00000486210 FAM198AQ9UFP1 575 aa21.74■■□□□ 1.07
MCF2L-226ENST00000486210 GABRQQ9UN88 632 aa21.74■■□□□ 1.07
MCF2L-226ENST00000486210 RFX5P48382 616 aaPredicted RBP21.73■■□□□ 1.07
MCF2L-226ENST00000486210 CHMP4BQ9H444 224 aaKnown RBP21.73■■□□□ 1.07
MCF2L-226ENST00000486210 PHIPQ8WWQ0 1821 aa21.73■■□□□ 1.07
MCF2L-226ENST00000486210 ATRNL1Q5VV63 1379 aa21.73■■□□□ 1.07
MCF2L-226ENST00000486210 PNMA6EA0A0J9YXQ4 647 aa21.72■■□□□ 1.07
MCF2L-226ENST00000486210 PRDX5P30044 214 aa21.72■■□□□ 1.07
MCF2L-226ENST00000486210 CEP85Q6P2H3 762 aa21.72■■□□□ 1.07
MCF2L-226ENST00000486210 ZFPM1Q8IX07 1006 aa21.72■■□□□ 1.07
MCF2L-226ENST00000486210 WDR66Q8TBY9 1149 aa21.72■■□□□ 1.07
MCF2L-226ENST00000486210 U2AF1L4Q8WU68 220 aaKnown RBP21.72■■□□□ 1.07
MCF2L-226ENST00000486210 PARK7Q99497 189 aaKnown RBP21.72■■□□□ 1.07
MCF2L-226ENST00000486210 HTATIP2Q9BUP3 242 aa21.72■■□□□ 1.07
MCF2L-226ENST00000486210 ALPK3Q96L96 1907 aa21.71■■□□□ 1.07
MCF2L-226ENST00000486210 SLC5A1P13866 664 aa21.71■■□□□ 1.07
MCF2L-226ENST00000486210 FCGRTP55899 365 aa21.71■■□□□ 1.07
MCF2L-226ENST00000486210 UBXN2AP68543 259 aa21.71■■□□□ 1.07
MCF2L-226ENST00000486210 ATP8B2P98198 1209 aa21.71■■□□□ 1.07
MCF2L-226ENST00000486210 MTX1Q13505 466 aa21.71■■□□□ 1.07
MCF2L-226ENST00000486210 UNC93B1Q9H1C4 597 aa21.71■■□□□ 1.07
MCF2L-226ENST00000486210 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.07
MCF2L-226ENST00000486210 EYA2O00167 538 aa21.7■■□□□ 1.06
MCF2L-226ENST00000486210 CXCL11O14625 94 aa21.7■■□□□ 1.06
MCF2L-226ENST00000486210 SIRT2Q8IXJ6 389 aa21.7■■□□□ 1.06
MCF2L-226ENST00000486210 SLAIN1Q8ND83 568 aa21.7■■□□□ 1.06
MCF2L-226ENST00000486210 LPIN2Q92539 896 aa21.7■■□□□ 1.06
MCF2L-226ENST00000486210 BIN2Q9UBW5 565 aaPredicted RBP21.7■■□□□ 1.06
MCF2L-226ENST00000486210 PCDHB15Q9Y5E8 787 aa21.7■■□□□ 1.06
MCF2L-226ENST00000486210 PHF20L1A8MW92 1017 aa21.69■■□□□ 1.06
MCF2L-226ENST00000486210 SRGAP3O43295 1099 aa21.69■■□□□ 1.06
MCF2L-226ENST00000486210 ATG9AQ7Z3C6 839 aa21.69■■□□□ 1.06
MCF2L-226ENST00000486210 USP40Q9NVE5 1235 aa21.69■■□□□ 1.06
MCF2L-226ENST00000486210 DOCK1Q14185 1865 aa21.69■■□□□ 1.06
MCF2L-226ENST00000486210 DOCK3Q8IZD9 2030 aa21.68■■□□□ 1.06
MCF2L-226ENST00000486210 A0A0G2JLL6 359 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-226ENST00000486210 FARP2O94887 1054 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-226ENST00000486210 SGPL1O95470 568 aa21.68■■□□□ 1.06
MCF2L-226ENST00000486210 PRRT2Q7Z6L0 340 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-226ENST00000486210 RFX7Q2KHR2 1363 aa21.67■■□□□ 1.06
MCF2L-226ENST00000486210 SLURP2P0DP57 97 aa21.67■■□□□ 1.06
MCF2L-226ENST00000486210 POLA2Q14181 598 aa21.67■■□□□ 1.06
MCF2L-226ENST00000486210 SH3BP5LQ7L8J4 393 aa21.67■■□□□ 1.06
MCF2L-226ENST00000486210 SCYL3Q8IZE3 742 aa21.67■■□□□ 1.06
MCF2L-226ENST00000486210 PA2G4Q9UQ80 394 aaKnown RBP21.67■■□□□ 1.06
MCF2L-226ENST00000486210 AFG3L2Q9Y4W6 797 aa21.67■■□□□ 1.06
MCF2L-226ENST00000486210 ADCY3O60266 1144 aa21.66■■□□□ 1.06
MCF2L-226ENST00000486210 ELNP15502 786 aa21.66■■□□□ 1.06
MCF2L-226ENST00000486210 PTPRAP18433 802 aa21.66■■□□□ 1.06
MCF2L-226ENST00000486210 FLT3LGP49771 235 aa21.66■■□□□ 1.06
MCF2L-226ENST00000486210 RPAP2Q8IXW5 612 aaPredicted RBP21.66■■□□□ 1.06
MCF2L-226ENST00000486210 SSH3Q8TE77 659 aa21.66■■□□□ 1.06
MCF2L-226ENST00000486210 GNL3LQ9NVN8 582 aaKnown RBP21.66■■□□□ 1.06
MCF2L-226ENST00000486210 FBXO3Q9UK99 471 aa21.66■■□□□ 1.06
MCF2L-226ENST00000486210 NR2E3Q9Y5X4 410 aa21.66■■□□□ 1.06
MCF2L-226ENST00000486210 ZHX2Q9Y6X8 837 aa21.66■■□□□ 1.06
MCF2L-226ENST00000486210 SALL1Q9NSC2 1324 aa21.65■■□□□ 1.06
MCF2L-226ENST00000486210 LDHBP07195 334 aaKnown RBP21.65■■□□□ 1.06
MCF2L-226ENST00000486210 CEP126Q9P2H0 1117 aa21.65■■□□□ 1.06
MCF2L-226ENST00000486210 SOX1O00570 391 aaPredicted RBP21.64■■□□□ 1.05
MCF2L-226ENST00000486210 INHAP05111 366 aa21.64■■□□□ 1.05
MCF2L-226ENST00000486210 RGS3P49796 1198 aa21.64■■□□□ 1.05
MCF2L-226ENST00000486210 MAP3K10Q02779 954 aa21.64■■□□□ 1.05
MCF2L-226ENST00000486210 GADL1Q6ZQY3 521 aa21.64■■□□□ 1.05
MCF2L-226ENST00000486210 FASTKD5Q7L8L6 764 aaKnown RBP21.64■■□□□ 1.05
MCF2L-226ENST00000486210 PXYLP1Q8TE99 480 aa21.64■■□□□ 1.05
MCF2L-226ENST00000486210 IDI2Q9BXS1 227 aa21.64■■□□□ 1.05
MCF2L-226ENST00000486210 SIL1Q9H173 461 aa21.64■■□□□ 1.05
MCF2L-226ENST00000486210 LAMA3Q16787 3333 aa21.64■■□□□ 1.05
MCF2L-226ENST00000486210 CIAO1O76071 339 aa21.63■■□□□ 1.05
MCF2L-226ENST00000486210 IRF5Q13568 498 aa21.63■■□□□ 1.05
MCF2L-226ENST00000486210 ATP2B3Q16720 1220 aa21.63■■□□□ 1.05
MCF2L-226ENST00000486210 COPRSQ9NQ92 184 aa21.63■■□□□ 1.05
MCF2L-226ENST00000486210 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.63■■□□□ 1.05
MCF2L-226ENST00000486210 SLC45A1Q9Y2W3 748 aa21.63■■□□□ 1.05
MCF2L-226ENST00000486210 GAKO14976 1311 aa21.62■■□□□ 1.05
MCF2L-226ENST00000486210 DDTLA6NHG4 134 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-226ENST00000486210 ENTPD3O75355 529 aa21.62■■□□□ 1.05
MCF2L-226ENST00000486210 PHKA1P46020 1223 aa21.62■■□□□ 1.05
MCF2L-226ENST00000486210 AAMPQ13685 434 aa21.62■■□□□ 1.05
MCF2L-226ENST00000486210 DEFB118Q96PH6 123 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms