RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 OTUD7BQ6GQQ9 843 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 PI16Q6UXB8 463 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 SH3BP5LQ7L8J4 393 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 ZNF384Q8TF68 577 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 FAM151AQ8WW52 585 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 ERO1AQ96HE7 468 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 API5Q9BZZ5 524 aaKnown RBP11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 COPRSQ9NQ92 184 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 COG6Q9Y2V7 657 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 SUGT1Q9Y2Z0 365 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 PTCH2Q9Y6C5 1203 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 PNMA6EA0A0J9YXQ4 647 aa11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 LDHBP07195 334 aaKnown RBP11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 RASGRF1Q13972 1273 aa11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 FKBP1CQ5VVH2 108 aa11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 TBC1D9Q6ZT07 1266 aa11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 CCDC84Q86UT8 332 aaPredicted RBP11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 ERO1BQ86YB8 467 aa11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 ZNF341Q9BYN7 854 aa11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 ZFYVE28Q9HCC9 887 aa11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 DDX4Q9NQI0 724 aaKnown RBP11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 MAST3O60307 1309 aa11.56□□□□□ -0.56
TMEM39A-208ENST00000486159 A0A1B0GUL7 405 aa11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 SRGAP3O43295 1099 aa11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 RGS3P49796 1198 aa11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 SLC17A8Q8NDX2 589 aa11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 XAGE2Q96GT9 111 aa11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 RWDD1Q9H446 243 aaPredicted RBP11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 ABCF2Q9UG63 623 aa11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 CPA4Q9UI42 421 aa11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 ZNF112Q9UJU3 913 aa11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 DENND2AQ9ULE3 1009 aa11.55□□□□□ -0.56
TMEM39A-208ENST00000486159 FAM196BA6NMK8 535 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 PHF20L1A8MW92 1017 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 CETPP11597 493 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 RLBP1P12271 317 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 PRKAR2AP13861 404 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 PPIL2Q13356 520 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 SH3TC2Q8TF17 1288 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 ARMC5Q96C12 935 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 NEUROD6Q96NK8 337 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 SALL1Q9NSC2 1324 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 RPAP1Q9BWH6 1393 aaPredicted RBP11.54□□□□□ -0.56
TMEM39A-208ENST00000486159 PDHXO00330 501 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 TLR2O60603 784 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 WDHD1O75717 1129 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 PPATQ06203 517 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 SNAPC2Q13487 334 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 PICALMQ13492 652 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 GPAT2Q6NUI2 795 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 C17orf99Q6UX52 265 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 TMEM57Q8N5G2 664 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 C1orf115Q9H7X2 142 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 GNL3LQ9NVN8 582 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 HMG20BQ9P0W2 317 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 GAKO14976 1311 aa11.53□□□□□ -0.56
TMEM39A-208ENST00000486159 CYP2C8P10632 490 aa11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 BTDP43251 543 aa11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 RHBDL3P58872 404 aa11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 LACTBP83111 547 aaPredicted RBP11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 MECOMQ03112 1051 aa11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 ITPRIPQ8IWB1 547 aa11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 ZNF333Q96JL9 665 aa11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 KCNH4Q9UQ05 1017 aa11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 RBM19Q9Y4C8 960 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 ADGRA2Q96PE1 1338 aa11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 RFX7Q2KHR2 1363 aa11.52□□□□□ -0.57
TMEM39A-208ENST00000486159 DOCK2Q92608 1830 aa11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 GNAI3P08754 354 aa11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 MTX1Q13505 466 aa11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 HDAC1Q13547 482 aaPredicted RBP11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 RRP1BQ14684 758 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 MTFR1Q15390 333 aa11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 NOL9Q5SY16 702 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 DZIP1Q86YF9 867 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 TRIM47Q96LD4 638 aa11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 IDI2Q9BXS1 227 aa11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 SNRKQ9NRH2 765 aa11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 ZHX2Q9Y6X8 837 aa11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 PHIPQ8WWQ0 1821 aa11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 MYO5AQ9Y4I1 1855 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-208ENST00000486159 SEMA3EO15041 775 aa11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 PTPRAP18433 802 aa11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 MCAMP43121 646 aa11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 PSMC4P43686 418 aa11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 SLC9C1Q4G0N8 1177 aa11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 ANKRD23Q86SG2 305 aa11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 ZSCAN29Q8IWY8 852 aaPredicted RBP11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 ZBTB40Q9NUA8 1239 aa11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 MROH7-TTC4A0A0A0MT08 1334 aa11.5□□□□□ -0.57
TMEM39A-208ENST00000486159 GPR75-ASB3A0A0A6YYF3 556 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 ENTPD3O75355 529 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 GNAI2P04899 355 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms