RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 WDR17Q8IZU2 1322 aa25.89■■□□□ 1.73
CLN5-202ENST00000485938 PDE4BQ07343 736 aa25.88■■□□□ 1.73
CLN5-202ENST00000485938 GOLGA8FQ08AF8 430 aa25.88■■□□□ 1.73
CLN5-202ENST00000485938 GOLGA8DPQ0D2H9 430 aa25.88■■□□□ 1.73
CLN5-202ENST00000485938 TRIM29Q14134 588 aa25.88■■□□□ 1.73
CLN5-202ENST00000485938 SGMS1Q86VZ5 419 aa25.88■■□□□ 1.73
CLN5-202ENST00000485938 MYO5AQ9Y4I1 1855 aaKnown RBP25.88■■□□□ 1.73
CLN5-202ENST00000485938 LDHAL6AQ6ZMR3 332 aa25.88■■□□□ 1.73
CLN5-202ENST00000485938 CADPS2Q86UW7 1296 aa25.88■■□□□ 1.73
CLN5-202ENST00000485938 ST7Q9NRC1 585 aa25.88■■□□□ 1.73
CLN5-202ENST00000485938 GOLGA8AA7E2F4 631 aa25.87■■□□□ 1.73
CLN5-202ENST00000485938 MDM2Q00987 491 aaPredicted RBP25.87■■□□□ 1.73
CLN5-202ENST00000485938 ELOA2Q8IYF1 753 aaPredicted RBP25.87■■□□□ 1.73
CLN5-202ENST00000485938 SYNE4Q8N205 404 aa25.87■■□□□ 1.73
CLN5-202ENST00000485938 ZNF532Q9HCE3 1301 aa25.87■■□□□ 1.73
CLN5-202ENST00000485938 DCCP43146 1447 aa25.87■■□□□ 1.73
CLN5-202ENST00000485938 IDH1O75874 414 aaKnown RBP25.87■■□□□ 1.73
CLN5-202ENST00000485938 PTPN21Q16825 1174 aa25.87■■□□□ 1.73
CLN5-202ENST00000485938 NFXL1Q6ZNB6 911 aa25.87■■□□□ 1.73
CLN5-202ENST00000485938 TOM1L2Q6ZVM7 507 aa25.87■■□□□ 1.73
CLN5-202ENST00000485938 MYL10Q9BUA6 226 aa25.87■■□□□ 1.73
CLN5-202ENST00000485938 SRRTQ9BXP5 876 aaKnown RBP25.87■■□□□ 1.73
CLN5-202ENST00000485938 STK36Q9NRP7 1315 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 UBE2Q2LH0YL09 131 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 VGLL2Q8N8G2 317 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 KRI1Q8N9T8 703 aaKnown RBP25.86■■□□□ 1.73
CLN5-202ENST00000485938 FOXN1O15353 648 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 ARHGAP6O43182 974 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 ZSCAN12O43309 604 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 PDE6AP16499 860 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 ITGA6P23229 1130 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 TBX2Q13207 712 aaPredicted RBP25.86■■□□□ 1.73
CLN5-202ENST00000485938 TMEM67Q5HYA8 995 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 KIF6Q6ZMV9 814 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 UBXN4Q92575 508 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 PARP3Q9Y6F1 533 aa25.86■■□□□ 1.73
CLN5-202ENST00000485938 CDHR2Q9BYE9 1310 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 TADA3O75528 432 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 STK11IPQ8N1F8 1099 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 TTLL11Q8NHH1 800 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 GREM2Q9H772 168 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 MAP3K15Q6ZN16 1313 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 TCRBV5S4A2TA0A5A2 114 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 VWA3AA6NCI4 1184 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 URI1O94763 535 aaPredicted RBP25.85■■□□□ 1.73
CLN5-202ENST00000485938 PNMA6AP0CW24 399 aaPredicted RBP25.85■■□□□ 1.73
CLN5-202ENST00000485938 TAF3Q5VWG9 929 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 NOSTRINQ8IVI9 506 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 STRBPQ96SI9 672 aaKnown RBP25.85■■□□□ 1.73
CLN5-202ENST00000485938 PPP2R2CQ9Y2T4 447 aa25.85■■□□□ 1.73
CLN5-202ENST00000485938 XIRP1Q702N8 1843 aaKnown RBP25.84■■□□□ 1.73
CLN5-202ENST00000485938 LIFRP42702 1097 aa25.84■■□□□ 1.73
CLN5-202ENST00000485938 ALX1Q15699 326 aa25.84■■□□□ 1.73
CLN5-202ENST00000485938 SLC26A6Q9BXS9 759 aa25.84■■□□□ 1.73
CLN5-202ENST00000485938 INCENPQ9NQS7 918 aa25.84■■□□□ 1.73
CLN5-202ENST00000485938 WWC3Q9ULE0 1092 aa25.84■■□□□ 1.73
CLN5-202ENST00000485938 ZRANB2O95218 330 aaKnown RBP eCLIP25.83■■□□□ 1.73
CLN5-202ENST00000485938 FAM193AP78312 1265 aa25.83■■□□□ 1.73
CLN5-202ENST00000485938 SSRP1Q08945 709 aaKnown RBP25.83■■□□□ 1.73
CLN5-202ENST00000485938 MNS1Q8NEH6 495 aa25.83■■□□□ 1.73
CLN5-202ENST00000485938 LRP6O75581 1613 aa25.83■■□□□ 1.73
CLN5-202ENST00000485938 FMNL1O95466 1100 aaPredicted RBP25.83■■□□□ 1.73
CLN5-202ENST00000485938 CNNM1Q9NRU3 951 aa25.83■■□□□ 1.73
CLN5-202ENST00000485938 MAN1B1Q9UKM7 699 aa25.83■■□□□ 1.73
CLN5-202ENST00000485938 SHANK3Q9BYB0 1731 aa25.83■■□□□ 1.73
CLN5-202ENST00000485938 SPECC1Q5M775 1068 aa25.82■■□□□ 1.72
CLN5-202ENST00000485938 EFCAB8A8MWE9 144 aa25.82■■□□□ 1.72
CLN5-202ENST00000485938 PHKA1P46020 1223 aa25.82■■□□□ 1.72
CLN5-202ENST00000485938 TOB1P50616 345 aaPredicted RBP25.82■■□□□ 1.72
CLN5-202ENST00000485938 CARD6Q9BX69 1037 aa25.82■■□□□ 1.72
CLN5-202ENST00000485938 ARGLU1Q9NWB6 273 aaPredicted RBP25.82■■□□□ 1.72
CLN5-202ENST00000485938 HOOK1Q9UJC3 728 aaKnown RBP25.82■■□□□ 1.72
CLN5-202ENST00000485938 TBC1D2BQ9UPU7 963 aa25.82■■□□□ 1.72
CLN5-202ENST00000485938 SLC12A7Q9Y666 1083 aa25.82■■□□□ 1.72
CLN5-202ENST00000485938 STRCQ7RTU9 1775 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 ANKRD18BA2A2Z9 1011 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 ZNF18P17022 549 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 ARID4AP29374 1257 aaPredicted RBP25.81■■□□□ 1.72
CLN5-202ENST00000485938 NT5DC1Q5TFE4 455 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 MPHOSPH8Q99549 860 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 BAG1Q99933 345 aaPredicted RBP25.81■■□□□ 1.72
CLN5-202ENST00000485938 ZSWIM5Q9P217 1185 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 ZNF335Q9H4Z2 1342 aaPredicted RBP25.81■■□□□ 1.72
CLN5-202ENST00000485938 BTBD18B2RXH4 712 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 IL2RBP14784 551 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 IFNAR1P17181 557 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 CTSWP56202 376 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 FMR1Q06787 632 aaKnown RBP eCLIP25.81■■□□□ 1.72
CLN5-202ENST00000485938 POSTNQ15063 836 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 GIGYF2Q6Y7W6 1299 aaKnown RBP25.81■■□□□ 1.72
CLN5-202ENST00000485938 AIDAQ96BJ3 306 aa25.81■■□□□ 1.72
CLN5-202ENST00000485938 EPB41L4AQ9HCS5 686 aaPredicted RBP25.81■■□□□ 1.72
CLN5-202ENST00000485938 FBXO2Q9UK22 296 aaPredicted RBP25.81■■□□□ 1.72
CLN5-202ENST00000485938 PDE8BO95263 885 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 MMP1P03956 469 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 PLA2G4AP47712 749 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 GRIN1Q05586 938 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 HSP90AA4PQ58FG1 418 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 CREBRFQ8IUR6 639 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 WASF1Q92558 559 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms