RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 FGAP02671 866 aa20.99■□□□□ 0.95
CHMP3-207ENST00000485465 EAPPQ56P03 285 aaPredicted RBP20.99■□□□□ 0.95
CHMP3-207ENST00000485465 ZC3H15Q8WU90 426 aaKnown RBP20.99■□□□□ 0.95
CHMP3-207ENST00000485465 OSBPL5Q9H0X9 879 aaPredicted RBP20.99■□□□□ 0.95
CHMP3-207ENST00000485465 NAPBQ9H115 298 aa20.99■□□□□ 0.95
CHMP3-207ENST00000485465 GGA3Q9NZ52 723 aa20.99■□□□□ 0.95
CHMP3-207ENST00000485465 U3KPZ7 1027 aaPredicted RBP20.99■□□□□ 0.95
CHMP3-207ENST00000485465 ECM29Q5VYK3 1845 aa20.99■□□□□ 0.95
CHMP3-207ENST00000485465 EPB41L2O43491 1005 aaKnown RBP20.98■□□□□ 0.95
CHMP3-207ENST00000485465 TDO2P48775 406 aa20.98■□□□□ 0.95
CHMP3-207ENST00000485465 TCP10Q12799 353 aa20.98■□□□□ 0.95
CHMP3-207ENST00000485465 FAM83AQ86UY5 434 aa20.98■□□□□ 0.95
CHMP3-207ENST00000485465 ZFPM1Q8IX07 1006 aa20.98■□□□□ 0.95
CHMP3-207ENST00000485465 USP26Q9BXU7 913 aa20.98■□□□□ 0.95
CHMP3-207ENST00000485465 PGAP2Q9UHJ9 254 aa20.98■□□□□ 0.95
CHMP3-207ENST00000485465 CTNNA3Q9UI47 895 aa20.98■□□□□ 0.95
CHMP3-207ENST00000485465 ZMYM6O95789 1325 aa20.98■□□□□ 0.95
CHMP3-207ENST00000485465 PITPNM2Q9BZ72 1349 aa20.98■□□□□ 0.95
CHMP3-207ENST00000485465 CNTNAP1P78357 1384 aa20.97■□□□□ 0.95
CHMP3-207ENST00000485465 TNNI2P48788 182 aa20.97■□□□□ 0.95
CHMP3-207ENST00000485465 TNFAIP1Q13829 316 aa20.97■□□□□ 0.95
CHMP3-207ENST00000485465 APOBEC3FQ8IUX4 373 aaKnown RBP20.97■□□□□ 0.95
CHMP3-207ENST00000485465 FAM151AQ8WW52 585 aa20.97■□□□□ 0.95
CHMP3-207ENST00000485465 MCM9Q9NXL9 1143 aa20.97■□□□□ 0.95
CHMP3-207ENST00000485465 SAP30BPQ9UHR5 308 aaKnown RBP20.97■□□□□ 0.95
CHMP3-207ENST00000485465 RBM8AQ9Y5S9 174 aaKnown RBP20.97■□□□□ 0.95
CHMP3-207ENST00000485465 CDK5RAP2Q96SN8 1893 aa20.96■□□□□ 0.95
CHMP3-207ENST00000485465 USP17L12C9JPN9 530 aa20.96■□□□□ 0.95
CHMP3-207ENST00000485465 USP17L21D6R901 530 aa20.96■□□□□ 0.95
CHMP3-207ENST00000485465 SBK1Q52WX2 424 aa20.96■□□□□ 0.95
CHMP3-207ENST00000485465 CTR9Q6PD62 1173 aa20.96■□□□□ 0.95
CHMP3-207ENST00000485465 DCPSQ96C86 337 aaKnown RBP20.96■□□□□ 0.95
CHMP3-207ENST00000485465 FOCADQ5VW36 1801 aa20.96■□□□□ 0.95
CHMP3-207ENST00000485465 RASA3Q14644 834 aa20.95■□□□□ 0.94
CHMP3-207ENST00000485465 ARPP21Q9UBL0 812 aaPredicted RBP20.95■□□□□ 0.94
CHMP3-207ENST00000485465 PALD1Q9ULE6 856 aa20.95■□□□□ 0.94
CHMP3-207ENST00000485465 SCAF8Q9UPN6 1271 aaKnown RBP20.95■□□□□ 0.94
CHMP3-207ENST00000485465 POLR3DP05423 398 aaPredicted RBP20.94■□□□□ 0.94
CHMP3-207ENST00000485465 CYP2D6P10635 497 aa20.94■□□□□ 0.94
CHMP3-207ENST00000485465 NECTIN1Q15223 517 aa20.94■□□□□ 0.94
CHMP3-207ENST00000485465 SH3BP5LQ7L8J4 393 aa20.94■□□□□ 0.94
CHMP3-207ENST00000485465 AMOTL1Q8IY63 956 aa20.94■□□□□ 0.94
CHMP3-207ENST00000485465 TMEM39BQ9GZU3 492 aa20.94■□□□□ 0.94
CHMP3-207ENST00000485465 DEFB129Q9H1M3 183 aa20.94■□□□□ 0.94
CHMP3-207ENST00000485465 DHX36Q9H2U1 1008 aaKnown RBP20.94■□□□□ 0.94
CHMP3-207ENST00000485465 GPBP1L1Q9HC44 474 aaPredicted RBP20.94■□□□□ 0.94
CHMP3-207ENST00000485465 CLEC11AQ9Y240 323 aa20.94■□□□□ 0.94
CHMP3-207ENST00000485465 COL2A1P02458 1487 aaPredicted RBP20.94■□□□□ 0.94
CHMP3-207ENST00000485465 NAV1Q8NEY1 1877 aa20.93■□□□□ 0.94
CHMP3-207ENST00000485465 CYP2D7A0A087X1C5 515 aa20.93■□□□□ 0.94
CHMP3-207ENST00000485465 DDTLA6NHG4 134 aaPredicted RBP20.93■□□□□ 0.94
CHMP3-207ENST00000485465 MINDY4BA8MYZ0 360 aa20.93■□□□□ 0.94
CHMP3-207ENST00000485465 POTEIP0CG38 1075 aa20.93■□□□□ 0.94
CHMP3-207ENST00000485465 POTEJP0CG39 1038 aa20.93■□□□□ 0.94
CHMP3-207ENST00000485465 IMMTQ16891 758 aaKnown RBP20.93■□□□□ 0.94
CHMP3-207ENST00000485465 C12orf60Q5U649 245 aa20.93■□□□□ 0.94
CHMP3-207ENST00000485465 ZSCAN29Q8IWY8 852 aaPredicted RBP20.93■□□□□ 0.94
CHMP3-207ENST00000485465 ATRNL1Q5VV63 1379 aa20.93■□□□□ 0.94
CHMP3-207ENST00000485465 ZNF213O14771 459 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 YY1P25490 414 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 HSPA4P34932 840 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 PLCD1P51178 756 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 PPARAQ07869 468 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 SLC4A8Q2Y0W8 1093 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 CREB3L3Q68CJ9 461 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 TTC6Q86TZ1 520 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 LDHDQ86WU2 507 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 SULF1Q8IWU6 871 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 UPF2Q9HAU5 1272 aaKnown RBP20.92■□□□□ 0.94
CHMP3-207ENST00000485465 PPP2R3BQ9Y5P8 575 aa20.92■□□□□ 0.94
CHMP3-207ENST00000485465 DDX60LQ5H9U9 1706 aaKnown RBP20.92■□□□□ 0.94
CHMP3-207ENST00000485465 SLC27A2O14975 620 aa20.91■□□□□ 0.94
CHMP3-207ENST00000485465 HLA-DOAP06340 250 aa20.91■□□□□ 0.94
CHMP3-207ENST00000485465 CYP21A2P08686 494 aa20.91■□□□□ 0.94
CHMP3-207ENST00000485465 MCCP23508 829 aa20.91■□□□□ 0.94
CHMP3-207ENST00000485465 HAND2P61296 217 aa20.91■□□□□ 0.94
CHMP3-207ENST00000485465 EVX2Q03828 476 aa20.91■□□□□ 0.94
CHMP3-207ENST00000485465 KRT26Q7Z3Y9 468 aa20.91■□□□□ 0.94
CHMP3-207ENST00000485465 TEPSINQ96N21 525 aa20.91■□□□□ 0.94
CHMP3-207ENST00000485465 ANAPC4Q9UJX5 808 aa20.91■□□□□ 0.94
CHMP3-207ENST00000485465 BAZ2AQ9UIF9 1905 aaKnown RBP20.9■□□□□ 0.94
CHMP3-207ENST00000485465 SMIM22K7EJ46 135 aa20.9■□□□□ 0.94
CHMP3-207ENST00000485465 RNF20Q5VTR2 975 aa20.9■□□□□ 0.94
CHMP3-207ENST00000485465 USP48Q86UV5 1035 aa20.9■□□□□ 0.94
CHMP3-207ENST00000485465 KCNB2Q92953 911 aa20.9■□□□□ 0.94
CHMP3-207ENST00000485465 PI4KBQ9UBF8 816 aa20.9■□□□□ 0.94
CHMP3-207ENST00000485465 MYH1P12882 1939 aa20.89■□□□□ 0.93
CHMP3-207ENST00000485465 ADM5C9JUS6 153 aa20.89■□□□□ 0.93
CHMP3-207ENST00000485465 CTDSPL2Q05D32 466 aa20.89■□□□□ 0.93
CHMP3-207ENST00000485465 CDC37L1Q7L3B6 337 aa20.89■□□□□ 0.93
CHMP3-207ENST00000485465 CDAN1Q8IWY9 1227 aa20.89■□□□□ 0.93
CHMP3-207ENST00000485465 CSRNP1Q96S65 589 aa20.89■□□□□ 0.93
CHMP3-207ENST00000485465 NBPF3Q9H094 633 aa20.89■□□□□ 0.93
CHMP3-207ENST00000485465 SLC3A2P08195 630 aaKnown RBP20.88■□□□□ 0.93
CHMP3-207ENST00000485465 MAP1SQ66K74 1059 aaPredicted RBP20.88■□□□□ 0.93
CHMP3-207ENST00000485465 FOXP4Q8IVH2 680 aaPredicted RBP20.88■□□□□ 0.93
CHMP3-207ENST00000485465 C22orf23Q9BZE7 217 aa20.88■□□□□ 0.93
CHMP3-207ENST00000485465 EHD4Q9H223 541 aa20.88■□□□□ 0.93
CHMP3-207ENST00000485465 ROBO3Q96MS0 1386 aa20.87■□□□□ 0.93
CHMP3-207ENST00000485465 ZKSCAN1P17029 563 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms