RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 DZIP1Q86YF9 867 aaKnown RBP16.4■□□□□ 0.22
UBA3-210ENST00000485424 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
UBA3-210ENST00000485424 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
UBA3-210ENST00000485424 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
UBA3-210ENST00000485424 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
UBA3-210ENST00000485424 PHKA1P46020 1223 aa16.39■□□□□ 0.21
UBA3-210ENST00000485424 HABP4Q5JVS0 413 aaKnown RBP16.39■□□□□ 0.21
UBA3-210ENST00000485424 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
UBA3-210ENST00000485424 FAM198AQ9UFP1 575 aa16.39■□□□□ 0.21
UBA3-210ENST00000485424 ZNF112Q9UJU3 913 aa16.39■□□□□ 0.21
UBA3-210ENST00000485424 KCNH4Q9UQ05 1017 aa16.39■□□□□ 0.21
UBA3-210ENST00000485424 SALL1Q9NSC2 1324 aa16.39■□□□□ 0.21
UBA3-210ENST00000485424 MYCP01106 439 aaPredicted RBP16.38■□□□□ 0.21
UBA3-210ENST00000485424 CTGFP29279 349 aa16.38■□□□□ 0.21
UBA3-210ENST00000485424 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBA3-210ENST00000485424 MVPQ14764 893 aaKnown RBP16.38■□□□□ 0.21
UBA3-210ENST00000485424 SLC4A8Q2Y0W8 1093 aa16.38■□□□□ 0.21
UBA3-210ENST00000485424 NOL9Q5SY16 702 aaKnown RBP16.38■□□□□ 0.21
UBA3-210ENST00000485424 GORABQ5T7V8 394 aa16.38■□□□□ 0.21
UBA3-210ENST00000485424 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
UBA3-210ENST00000485424 CCDC102BQ68D86 513 aa16.38■□□□□ 0.21
UBA3-210ENST00000485424 C17orf99Q6UX52 265 aa16.38■□□□□ 0.21
UBA3-210ENST00000485424 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
UBA3-210ENST00000485424 NEUROD6Q96NK8 337 aa16.38■□□□□ 0.21
UBA3-210ENST00000485424 USP40Q9NVE5 1235 aa16.38■□□□□ 0.21
UBA3-210ENST00000485424 ABCF2Q9UG63 623 aa16.38■□□□□ 0.21
UBA3-210ENST00000485424 A0A1B0GUL7 405 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 ECM2O94769 699 aaPredicted RBP16.37■□□□□ 0.21
UBA3-210ENST00000485424 GNRH1P01148 92 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 GNAI2P04899 355 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 ADORA1P30542 326 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 TIMM10P62072 90 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 MOGSQ13724 837 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 ANKRD23Q86SG2 305 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 CPA4Q9UI42 421 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 FRMPD3Q5JV73 1810 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 MYH8P13535 1937 aa16.37■□□□□ 0.21
UBA3-210ENST00000485424 PDHXO00330 501 aa16.36■□□□□ 0.21
UBA3-210ENST00000485424 TRIM27P14373 513 aa16.36■□□□□ 0.21
UBA3-210ENST00000485424 PRMT2P55345 433 aa16.36■□□□□ 0.21
UBA3-210ENST00000485424 TFCP2Q12800 502 aa16.36■□□□□ 0.21
UBA3-210ENST00000485424 G3BP1Q13283 466 aaKnown RBP eCLIP16.36■□□□□ 0.21
UBA3-210ENST00000485424 ZSCAN29Q8IWY8 852 aaPredicted RBP16.36■□□□□ 0.21
UBA3-210ENST00000485424 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
UBA3-210ENST00000485424 BCAR3O75815 825 aa16.35■□□□□ 0.21
UBA3-210ENST00000485424 HNRNPUQ00839 825 aaKnown RBP eCLIP16.35■□□□□ 0.21
UBA3-210ENST00000485424 ZKSCAN2Q63HK3 967 aa16.35■□□□□ 0.21
UBA3-210ENST00000485424 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
UBA3-210ENST00000485424 ZFPM1Q8IX07 1006 aa16.35■□□□□ 0.21
UBA3-210ENST00000485424 XAGE2Q96GT9 111 aa16.35■□□□□ 0.21
UBA3-210ENST00000485424 GAKO14976 1311 aa16.35■□□□□ 0.21
UBA3-210ENST00000485424 ZBTB22O15209 634 aa16.34■□□□□ 0.21
UBA3-210ENST00000485424 PSMC4P43686 418 aa16.34■□□□□ 0.21
UBA3-210ENST00000485424 RGS3P49796 1198 aa16.34■□□□□ 0.21
UBA3-210ENST00000485424 MTX1Q13505 466 aa16.34■□□□□ 0.21
UBA3-210ENST00000485424 RASGRF1Q13972 1273 aa16.34■□□□□ 0.21
UBA3-210ENST00000485424 SHISA4Q96DD7 197 aa16.34■□□□□ 0.21
UBA3-210ENST00000485424 SRRDQ9UH36 339 aa16.34■□□□□ 0.21
UBA3-210ENST00000485424 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
UBA3-210ENST00000485424 PHF20L1A8MW92 1017 aa16.33■□□□□ 0.2
UBA3-210ENST00000485424 OSBPP22059 807 aa16.33■□□□□ 0.2
UBA3-210ENST00000485424 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
UBA3-210ENST00000485424 FTSJ3Q8IY81 847 aaKnown RBP16.33■□□□□ 0.2
UBA3-210ENST00000485424 IDI2Q9BXS1 227 aa16.33■□□□□ 0.2
UBA3-210ENST00000485424 MYPNQ86TC9 1320 aa16.33■□□□□ 0.2
UBA3-210ENST00000485424 HAX1O00165 279 aa16.32■□□□□ 0.2
UBA3-210ENST00000485424 BCRP11274 1271 aa16.32■□□□□ 0.2
UBA3-210ENST00000485424 MTFR1Q15390 333 aa16.32■□□□□ 0.2
UBA3-210ENST00000485424 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
UBA3-210ENST00000485424 GPAT2Q6NUI2 795 aa16.32■□□□□ 0.2
UBA3-210ENST00000485424 SH3BP5LQ7L8J4 393 aa16.32■□□□□ 0.2
UBA3-210ENST00000485424 SCYL3Q8IZE3 742 aa16.32■□□□□ 0.2
UBA3-210ENST00000485424 PARK7Q99497 189 aaKnown RBP16.32■□□□□ 0.2
UBA3-210ENST00000485424 CXCL11O14625 94 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 ENTPD3O75355 529 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
UBA3-210ENST00000485424 LDHCP07864 332 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 CYP2C8P10632 490 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 BTDP43251 543 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 FXR1P51114 621 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBA3-210ENST00000485424 GSTO1P78417 241 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 PICALMQ13492 652 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 RAET1EQ8TD07 263 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
UBA3-210ENST00000485424 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 TNNQ9UQP3 1299 aa16.31■□□□□ 0.2
UBA3-210ENST00000485424 MROH7-TTC4A0A0A0MT08 1334 aa16.3■□□□□ 0.2
UBA3-210ENST00000485424 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
UBA3-210ENST00000485424 DDTLA6NHG4 134 aaPredicted RBP16.3■□□□□ 0.2
UBA3-210ENST00000485424 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
UBA3-210ENST00000485424 PTPRAP18433 802 aa16.3■□□□□ 0.2
UBA3-210ENST00000485424 HOXD10P28358 340 aa16.3■□□□□ 0.2
UBA3-210ENST00000485424 GRK4P32298 578 aa16.3■□□□□ 0.2
UBA3-210ENST00000485424 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
UBA3-210ENST00000485424 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
UBA3-210ENST00000485424 DDX4Q9NQI0 724 aaKnown RBP16.3■□□□□ 0.2
UBA3-210ENST00000485424 RAI14Q9P0K7 980 aa16.3■□□□□ 0.2
UBA3-210ENST00000485424 COLQQ9Y215 455 aaPredicted RBP16.3■□□□□ 0.2
UBA3-210ENST00000485424 COL2A1P02458 1487 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms