RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CCDC102AQ96A19 550 aa9.51□□□□□ -0.89
MACF1-220ENST00000485063 NSUN4Q96CB9 384 aaKnown RBP9.51□□□□□ -0.89
MACF1-220ENST00000485063 CAPNS2Q96L46 248 aa9.51□□□□□ -0.89
MACF1-220ENST00000485063 ANGEL1Q9UNK9 670 aaKnown RBP9.51□□□□□ -0.89
MACF1-220ENST00000485063 GAKO14976 1311 aa9.51□□□□□ -0.89
MACF1-220ENST00000485063 DOCK2Q92608 1830 aa9.5□□□□□ -0.89
MACF1-220ENST00000485063 SMARCA5O60264 1052 aaPredicted RBP9.5□□□□□ -0.89
MACF1-220ENST00000485063 ATP5JP18859 108 aa9.5□□□□□ -0.89
MACF1-220ENST00000485063 IREB2P48200 963 aaKnown RBP9.5□□□□□ -0.89
MACF1-220ENST00000485063 CACNB3P54284 484 aa9.5□□□□□ -0.89
MACF1-220ENST00000485063 HDAC1Q13547 482 aaPredicted RBP9.5□□□□□ -0.89
MACF1-220ENST00000485063 NBPF12Q5TAG4 269 aaPredicted RBP9.5□□□□□ -0.89
MACF1-220ENST00000485063 DCAF15Q66K64 600 aa9.5□□□□□ -0.89
MACF1-220ENST00000485063 CDC42EP5Q6NZY7 148 aa9.5□□□□□ -0.89
MACF1-220ENST00000485063 CERS3Q8IU89 383 aa9.5□□□□□ -0.89
MACF1-220ENST00000485063 JMYQ8N9B5 988 aa9.5□□□□□ -0.89
MACF1-220ENST00000485063 FAM151AQ8WW52 585 aa9.5□□□□□ -0.89
MACF1-220ENST00000485063 DNAJC2Q99543 621 aaKnown RBP9.5□□□□□ -0.89
MACF1-220ENST00000485063 GPR75-ASB3A0A0A6YYF3 556 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 UNCXA6NJT0 531 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 UBE2Q2LH0YL09 131 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 ERC2O15083 957 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 CYP7A1P22680 504 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 MAP2K2P36507 400 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 MAP2K1Q02750 393 aaPredicted RBP9.49□□□□□ -0.89
MACF1-220ENST00000485063 TCP10Q12799 353 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 NOGQ13253 232 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 ANKRD45Q5TZF3 282 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 ZSCAN29Q8IWY8 852 aaPredicted RBP9.49□□□□□ -0.89
MACF1-220ENST00000485063 SLAIN1Q8ND83 568 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 AIDAQ96BJ3 306 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 BEGAINQ9BUH8 593 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.49□□□□□ -0.895e-8■■■□□ 17.2
MACF1-220ENST00000485063 TMEM39BQ9GZU3 492 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 BOLA2Q9H3K6 86 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 ECHDC1Q9NTX5 307 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 PAG1Q9NWQ8 432 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 AOX1Q06278 1338 aa9.49□□□□□ -0.89
MACF1-220ENST00000485063 RPAP1Q9BWH6 1393 aaPredicted RBP9.49□□□□□ -0.89
MACF1-220ENST00000485063 MYH7P12883 1935 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 GOLIM4O00461 696 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 ENTPD3O75355 529 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 PYGBP11216 843 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 IRX6P78412 446 aaPredicted RBP9.48□□□□□ -0.89
MACF1-220ENST00000485063 PICALMQ13492 652 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 ZSCAN25Q6NSZ9 544 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 ANKRD13AQ8IZ07 590 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 MAGEB6Q8N7X4 407 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 HAUS7Q99871 368 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 IDI2Q9BXS1 227 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 PIH1D3Q9NQM4 214 aaKnown RBP9.48□□□□□ -0.89
MACF1-220ENST00000485063 AATFQ9NY61 560 aaKnown RBP eCLIP9.48□□□□□ -0.89
MACF1-220ENST00000485063 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
MACF1-220ENST00000485063 NDUFB9Q9Y6M9 179 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 TTC41PQ6P2S7 1318 aa9.48□□□□□ -0.89
MACF1-220ENST00000485063 USP2O75604 605 aaPredicted RBP9.47□□□□□ -0.89
MACF1-220ENST00000485063 SLC10A3P09131 477 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 RGS3P49796 1198 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 MMRN1Q13201 1228 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 GSE1Q14687 1217 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 MAP3K11Q16584 847 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 LRRFIP1Q32MZ4 808 aaKnown RBP9.47□□□□□ -0.89
MACF1-220ENST00000485063 SLC9C2Q5TAH2 1124 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 MOB2Q70IA6 237 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 TEX11Q8IYF3 940 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 TEPSINQ96N21 525 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 ANTXR1Q9H6X2 564 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 CSADQ9Y600 493 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 FOCADQ5VW36 1801 aa9.47□□□□□ -0.89
MACF1-220ENST00000485063 THSD7BQ9C0I4 1608 aa9.46□□□□□ -0.89
MACF1-220ENST00000485063 AOC2O75106 756 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 MX1P20591 662 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 USP5P45974 858 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 PPP4CP60510 307 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 NFIAQ12857 509 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 B4GALNT3Q6L9W6 998 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 RASAL3Q86YV0 1011 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 SH3RF3Q8TEJ3 882 aaPredicted RBP9.46□□□□□ -0.9
MACF1-220ENST00000485063 ZNF384Q8TF68 577 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 CSRNP1Q96S65 589 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 ZNF341Q9BYN7 854 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 FAM198AQ9UFP1 575 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 CDK5RAP2Q96SN8 1893 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.9
MACF1-220ENST00000485063 OTOFQ9HC10 1997 aa9.45□□□□□ -0.9
MACF1-220ENST00000485063 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
MACF1-220ENST00000485063 WDHD1O75717 1129 aaPredicted RBP9.45□□□□□ -0.9
MACF1-220ENST00000485063 GLRX3O76003 335 aaKnown RBP9.45□□□□□ -0.9
MACF1-220ENST00000485063 HSPA1AP0DMV8 641 aaKnown RBP9.45□□□□□ -0.9
MACF1-220ENST00000485063 HSPA1BP0DMV9 641 aaKnown RBP9.45□□□□□ -0.9
MACF1-220ENST00000485063 RHBDL3P58872 404 aa9.45□□□□□ -0.9
MACF1-220ENST00000485063 MAP3K9P80192 1104 aa9.45□□□□□ -0.9
MACF1-220ENST00000485063 LDLRAD1Q5T700 205 aa9.45□□□□□ -0.9
MACF1-220ENST00000485063 SMC5Q8IY18 1101 aa9.45□□□□□ -0.9
MACF1-220ENST00000485063 MIGA1Q8NAN2 632 aa9.45□□□□□ -0.9
MACF1-220ENST00000485063 TGFBRAP1Q8WUH2 860 aa9.45□□□□□ -0.9
MACF1-220ENST00000485063 WRNIP1Q96S55 665 aa9.45□□□□□ -0.9
MACF1-220ENST00000485063 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms