RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 PAG1Q9NWQ8 432 aa19.73■□□□□ 0.75
DDR1-246ENST00000485023 DDTLA6NHG4 134 aaPredicted RBP19.72■□□□□ 0.75
DDR1-246ENST00000485023 SLC34A2O95436 690 aa19.72■□□□□ 0.75
DDR1-246ENST00000485023 SLURP2P0DP57 97 aa19.72■□□□□ 0.75
DDR1-246ENST00000485023 HDAC1Q13547 482 aaPredicted RBP19.72■□□□□ 0.75
DDR1-246ENST00000485023 VGLL4Q14135 290 aa19.72■□□□□ 0.75
DDR1-246ENST00000485023 ANKRD45Q5TZF3 282 aa19.72■□□□□ 0.75
DDR1-246ENST00000485023 SH3BP5LQ7L8J4 393 aa19.72■□□□□ 0.75
DDR1-246ENST00000485023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.72■□□□□ 0.75
DDR1-246ENST00000485023 HOOK2Q96ED9 719 aa19.72■□□□□ 0.75
DDR1-246ENST00000485023 GPATCH3Q96I76 525 aa19.72■□□□□ 0.75
DDR1-246ENST00000485023 SLC9C2Q5TAH2 1124 aa19.71■□□□□ 0.75
DDR1-246ENST00000485023 DCAF15Q66K64 600 aa19.71■□□□□ 0.75
DDR1-246ENST00000485023 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.71■□□□□ 0.75
DDR1-246ENST00000485023 CNKSR2Q8WXI2 1034 aa19.71■□□□□ 0.75
DDR1-246ENST00000485023 WNK4Q96J92 1243 aa19.71■□□□□ 0.75
DDR1-246ENST00000485023 HAUS7Q99871 368 aa19.71■□□□□ 0.75
DDR1-246ENST00000485023 ZNF341Q9BYN7 854 aa19.71■□□□□ 0.75
DDR1-246ENST00000485023 ZBTB47Q9UFB7 747 aaPredicted RBP19.71■□□□□ 0.75
DDR1-246ENST00000485023 PDE6AP16499 860 aa19.7■□□□□ 0.74
DDR1-246ENST00000485023 MAP3K9P80192 1104 aa19.7■□□□□ 0.74
DDR1-246ENST00000485023 AAMPQ13685 434 aa19.7■□□□□ 0.74
DDR1-246ENST00000485023 SLFNL1Q499Z3 407 aa19.7■□□□□ 0.74
DDR1-246ENST00000485023 SPRYD7Q5W111 196 aa19.7■□□□□ 0.74
DDR1-246ENST00000485023 MAPKAPK5Q8IW41 473 aa19.7■□□□□ 0.74
DDR1-246ENST00000485023 TGFBRAP1Q8WUH2 860 aa19.7■□□□□ 0.74
DDR1-246ENST00000485023 ZKSCAN4Q969J2 545 aaPredicted RBP19.7■□□□□ 0.74
DDR1-246ENST00000485023 CSADQ9Y600 493 aa19.7■□□□□ 0.74
DDR1-246ENST00000485023 PLCG2P16885 1265 aa19.69■□□□□ 0.74
DDR1-246ENST00000485023 CTCFP49711 727 aaPredicted RBP19.69■□□□□ 0.74
DDR1-246ENST00000485023 SLC4A8Q2Y0W8 1093 aa19.69■□□□□ 0.74
DDR1-246ENST00000485023 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
DDR1-246ENST00000485023 GCC1Q96CN9 775 aa19.69■□□□□ 0.74
DDR1-246ENST00000485023 OPTNQ96CV9 577 aa19.69■□□□□ 0.74
DDR1-246ENST00000485023 OSBPL5Q9H0X9 879 aaPredicted RBP19.69■□□□□ 0.74
DDR1-246ENST00000485023 ZNF532Q9HCE3 1301 aa19.69■□□□□ 0.74
DDR1-246ENST00000485023 ATRNL1Q5VV63 1379 aa19.69■□□□□ 0.74
DDR1-246ENST00000485023 FAM196BA6NMK8 535 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 MAP4K4O95819 1239 aaPredicted RBP19.68■□□□□ 0.74
DDR1-246ENST00000485023 IGHDP01880 384 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 CHGBP05060 677 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 HSPA8P11142 646 aaKnown RBP19.68■□□□□ 0.74
DDR1-246ENST00000485023 INPP5BP32019 993 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 GJA5P36382 358 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 LBX1P52954 281 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 PPP4CP60510 307 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 OTUD5Q96G74 571 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 RWDD1Q9H446 243 aaPredicted RBP19.68■□□□□ 0.74
DDR1-246ENST00000485023 SNCAIPQ9Y6H5 919 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 AK9Q5TCS8 1911 aa19.68■□□□□ 0.74
DDR1-246ENST00000485023 IGSF3O75054 1194 aa19.67■□□□□ 0.74
DDR1-246ENST00000485023 SAP30BPQ9UHR5 308 aaKnown RBP19.67■□□□□ 0.74
DDR1-246ENST00000485023 FLT1P17948 1338 aa19.67■□□□□ 0.74
DDR1-246ENST00000485023 MAGEB6P1A0A0J9YX57 407 aa19.66■□□□□ 0.74
DDR1-246ENST00000485023 UNCXA6NJT0 531 aa19.66■□□□□ 0.74
DDR1-246ENST00000485023 MX1P20591 662 aa19.66■□□□□ 0.74
DDR1-246ENST00000485023 USP5P45974 858 aa19.66■□□□□ 0.74
DDR1-246ENST00000485023 LNPKQ9C0E8 428 aa19.66■□□□□ 0.74
DDR1-246ENST00000485023 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.66■□□□□ 0.749e-8■■■□□ 18
DDR1-246ENST00000485023 TCRBV5S4A2TA0A5A2 114 aa19.65■□□□□ 0.74
DDR1-246ENST00000485023 NPM3O75607 178 aaKnown RBP19.65■□□□□ 0.74
DDR1-246ENST00000485023 TRPA1O75762 1119 aa19.65■□□□□ 0.74
DDR1-246ENST00000485023 ZBTB48P10074 688 aaPredicted RBP19.65■□□□□ 0.74
DDR1-246ENST00000485023 SREBF2Q12772 1141 aa19.65■□□□□ 0.74
DDR1-246ENST00000485023 RNF186Q9NXI6 227 aa19.65■□□□□ 0.74
DDR1-246ENST00000485023 ADD2P35612 726 aa19.64■□□□□ 0.73
DDR1-246ENST00000485023 LCORLQ8N3X6 602 aa19.64■□□□□ 0.73
DDR1-246ENST00000485023 PI4K2BQ8TCG2 481 aa19.64■□□□□ 0.73
DDR1-246ENST00000485023 RIOK1Q9BRS2 568 aaKnown RBP19.64■□□□□ 0.73
DDR1-246ENST00000485023 ARMT1Q9H993 441 aa19.64■□□□□ 0.73
DDR1-246ENST00000485023 PALD1Q9ULE6 856 aa19.64■□□□□ 0.73
DDR1-246ENST00000485023 TTC41PQ6P2S7 1318 aa19.64■□□□□ 0.73
DDR1-246ENST00000485023 COL2A1P02458 1487 aaPredicted RBP19.64■□□□□ 0.73
DDR1-246ENST00000485023 CDK5RAP2Q96SN8 1893 aa19.64■□□□□ 0.73
DDR1-246ENST00000485023 MANSC4A6NHS7 340 aaPredicted RBP19.63■□□□□ 0.73
DDR1-246ENST00000485023 SPDYE5A6NIY4 337 aa19.63■□□□□ 0.73
DDR1-246ENST00000485023 ERC2O15083 957 aa19.63■□□□□ 0.73
DDR1-246ENST00000485023 CA12O43570 354 aa19.63■□□□□ 0.73
DDR1-246ENST00000485023 SMC5Q8IY18 1101 aa19.63■□□□□ 0.73
DDR1-246ENST00000485023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.63■□□□□ 0.73
DDR1-246ENST00000485023 ZNF112Q9UJU3 913 aa19.63■□□□□ 0.73
DDR1-246ENST00000485023 SALL3Q9BXA9 1300 aa19.62■□□□□ 0.73
DDR1-246ENST00000485023 MBD4O95243 580 aa19.62■□□□□ 0.73
DDR1-246ENST00000485023 REM2Q8IYK8 340 aaPredicted RBP19.62■□□□□ 0.73
DDR1-246ENST00000485023 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.62■□□□□ 0.73
DDR1-246ENST00000485023 FOCADQ5VW36 1801 aa19.62■□□□□ 0.73
DDR1-246ENST00000485023 PHF20L1A8MW92 1017 aa19.61■□□□□ 0.73
DDR1-246ENST00000485023 GLRX3O76003 335 aaKnown RBP19.61■□□□□ 0.73
DDR1-246ENST00000485023 TM4SF4P48230 202 aa19.61■□□□□ 0.73
DDR1-246ENST00000485023 TMED8Q6PL24 325 aaPredicted RBP19.61■□□□□ 0.73
DDR1-246ENST00000485023 ERO1BQ86YB8 467 aa19.61■□□□□ 0.73
DDR1-246ENST00000485023 CERS3Q8IU89 383 aa19.61■□□□□ 0.73
DDR1-246ENST00000485023 CRACR2BQ8N4Y2 399 aaPredicted RBP19.61■□□□□ 0.73
DDR1-246ENST00000485023 KBTBD3Q8NAB2 608 aa19.61■□□□□ 0.73
DDR1-246ENST00000485023 SDR42E1Q8WUS8 393 aa19.61■□□□□ 0.73
DDR1-246ENST00000485023 CRNKL1Q9BZJ0 848 aaKnown RBP19.61■□□□□ 0.73
DDR1-246ENST00000485023 SIPA1L1O43166 1804 aa19.6■□□□□ 0.73
DDR1-246ENST00000485023 IGF2BP3O00425 579 aaKnown RBP eCLIP19.6■□□□□ 0.73
DDR1-246ENST00000485023 IRF6O14896 467 aa19.6■□□□□ 0.73
DDR1-246ENST00000485023 ZSCAN25Q6NSZ9 544 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms