RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
NEB-213ENST00000484968 RUFY2Q8WXA3 655 aa11.22□□□□□ -0.61
NEB-213ENST00000484968 TEPSINQ96N21 525 aa11.22□□□□□ -0.61
NEB-213ENST00000484968 DSCC1Q9BVC3 393 aa11.22□□□□□ -0.61
NEB-213ENST00000484968 SAP30BPQ9UHR5 308 aaKnown RBP11.22□□□□□ -0.61
NEB-213ENST00000484968 RBM8AQ9Y5S9 174 aaKnown RBP11.22□□□□□ -0.61
NEB-213ENST00000484968 DDX60LQ5H9U9 1706 aaKnown RBP11.21□□□□□ -0.61
NEB-213ENST00000484968 USP17L12C9JPN9 530 aa11.21□□□□□ -0.61
NEB-213ENST00000484968 USP17L21D6R901 530 aa11.21□□□□□ -0.61
NEB-213ENST00000484968 LMOD1P29536 600 aaPredicted RBP11.21□□□□□ -0.61
NEB-213ENST00000484968 PLCD1P51178 756 aa11.21□□□□□ -0.61
NEB-213ENST00000484968 PRAMEF18Q5VWM3 479 aa11.21□□□□□ -0.61
NEB-213ENST00000484968 CRNKL1Q9BZJ0 848 aaKnown RBP11.21□□□□□ -0.61
NEB-213ENST00000484968 TMEM39BQ9GZU3 492 aa11.21□□□□□ -0.61
NEB-213ENST00000484968 OSBPL5Q9H0X9 879 aaPredicted RBP11.21□□□□□ -0.61
NEB-213ENST00000484968 GGA3Q9NZ52 723 aa11.21□□□□□ -0.61
NEB-213ENST00000484968 CDK5RAP2Q96SN8 1893 aa11.21□□□□□ -0.62
NEB-213ENST00000484968 NPM3O75607 178 aaKnown RBP11.2□□□□□ -0.62
NEB-213ENST00000484968 APPP05067 770 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 CYP21A2P08686 494 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 GNAT2P19087 354 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 USP5P45974 858 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 FMR1Q06787 632 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEB-213ENST00000484968 RASA3Q14644 834 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 CASC1Q6TDU7 716 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 STOX1Q6ZVD7 989 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 USP50Q70EL3 339 aaPredicted RBP11.2□□□□□ -0.62
NEB-213ENST00000484968 KCNB2Q92953 911 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 KIF2CQ99661 725 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 NOL10Q9BSC4 688 aaKnown RBP11.2□□□□□ -0.62
NEB-213ENST00000484968 VEZTQ9HBM0 779 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 ATP8A2Q9NTI2 1148 aa11.2□□□□□ -0.62
NEB-213ENST00000484968 ATRNL1Q5VV63 1379 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 FAM196BA6NMK8 535 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 ADM5C9JUS6 153 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 SLC27A2O14975 620 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 ENTPD3O75355 529 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 VEGFAP15692 232 aaPredicted RBP11.19□□□□□ -0.62
NEB-213ENST00000484968 PLCG2P16885 1265 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 HSPA4P34932 840 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 HAND2P61296 217 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 EAPPQ56P03 285 aaPredicted RBP11.19□□□□□ -0.62
NEB-213ENST00000484968 C12orf60Q5U649 245 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 FKBP1CQ5VVH2 108 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 GIMAP6Q6P9H5 292 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 TBC1D10CQ8IV04 446 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 DYNLL2Q96FJ2 89 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 DNAJC18Q9H819 358 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 MCM9Q9NXL9 1143 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 SIPA1L1O43166 1804 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 SCN4AP35499 1836 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 FOCADQ5VW36 1801 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 ECM29Q5VYK3 1845 aa11.19□□□□□ -0.62
NEB-213ENST00000484968 ZMYM6O95789 1325 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 IQCA1LA6NCM1 817 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 KIF3CO14782 793 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 JAG1P78504 1218 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 RRP1BQ14684 758 aaKnown RBP11.18□□□□□ -0.62
NEB-213ENST00000484968 SHROOM1Q2M3G4 852 aaPredicted RBP11.18□□□□□ -0.62
NEB-213ENST00000484968 ADCK5Q3MIX3 580 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 MAP1SQ66K74 1059 aaPredicted RBP11.18□□□□□ -0.62
NEB-213ENST00000484968 KIAA1211Q6ZU35 1233 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 FAM83AQ86UY5 434 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 STK11IPQ8N1F8 1099 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 SLC44A5Q8NCS7 719 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 DEFB129Q9H1M3 183 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 FZD1Q9UP38 647 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 SNX14Q9Y5W7 946 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 SSC5DA1L4H1 1573 aa11.18□□□□□ -0.62
NEB-213ENST00000484968 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
NEB-213ENST00000484968 REC8O95072 547 aa11.17□□□□□ -0.62
NEB-213ENST00000484968 TDO2P48775 406 aa11.17□□□□□ -0.62
NEB-213ENST00000484968 GABPAQ06546 454 aa11.17□□□□□ -0.62
NEB-213ENST00000484968 PPARAQ07869 468 aa11.17□□□□□ -0.62
NEB-213ENST00000484968 NBPF12Q5TAG4 269 aaPredicted RBP11.17□□□□□ -0.62
NEB-213ENST00000484968 USP48Q86UV5 1035 aa11.17□□□□□ -0.62
NEB-213ENST00000484968 METTL16Q86W50 562 aaKnown RBP11.17□□□□□ -0.62
NEB-213ENST00000484968 CERS3Q8IU89 383 aa11.17□□□□□ -0.62
NEB-213ENST00000484968 GLIS2Q9BZE0 524 aaPredicted RBP11.17□□□□□ -0.62
NEB-213ENST00000484968 NAPBQ9H115 298 aa11.17□□□□□ -0.62
NEB-213ENST00000484968 ANAPC4Q9UJX5 808 aa11.17□□□□□ -0.62
NEB-213ENST00000484968 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
NEB-213ENST00000484968 BAZ2AQ9UIF9 1905 aaKnown RBP11.17□□□□□ -0.62
NEB-213ENST00000484968 PITPNM2Q9BZ72 1349 aa11.16□□□□□ -0.62
NEB-213ENST00000484968 TRAF5O00463 557 aa11.16□□□□□ -0.62
NEB-213ENST00000484968 MYO1BO43795 1136 aa11.16□□□□□ -0.62
NEB-213ENST00000484968 FGRP09769 529 aa11.16□□□□□ -0.62
NEB-213ENST00000484968 CPA1P15085 419 aa11.16□□□□□ -0.62
NEB-213ENST00000484968 RBM25P49756 843 aaKnown RBP11.16□□□□□ -0.62
NEB-213ENST00000484968 MAP3K10Q02779 954 aa11.16□□□□□ -0.62
NEB-213ENST00000484968 PNMA8AQ86V59 439 aaPredicted RBP11.16□□□□□ -0.62
NEB-213ENST00000484968 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
NEB-213ENST00000484968 IL17RAQ96F46 866 aa11.16□□□□□ -0.62
NEB-213ENST00000484968 TBC1D32Q96NH3 1257 aa11.16□□□□□ -0.62
NEB-213ENST00000484968 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.16□□□□□ -0.62
NEB-213ENST00000484968 ROBO3Q96MS0 1386 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms