RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 ZNF341Q9BYN7 854 aa26.95■■□□□ 1.9
CNTNAP3B-208ENST00000484254 AATFQ9NY61 560 aaKnown RBP eCLIP26.95■■□□□ 1.9
CNTNAP3B-208ENST00000484254 HDAC1Q13547 482 aaPredicted RBP26.94■■□□□ 1.9
CNTNAP3B-208ENST00000484254 VGLL4Q14135 290 aa26.94■■□□□ 1.9
CNTNAP3B-208ENST00000484254 SH3BP5LQ7L8J4 393 aa26.94■■□□□ 1.9
CNTNAP3B-208ENST00000484254 TEX11Q8IYF3 940 aa26.94■■□□□ 1.9
CNTNAP3B-208ENST00000484254 MAGEB6Q8N7X4 407 aa26.94■■□□□ 1.9
CNTNAP3B-208ENST00000484254 BOLA2Q9H3K6 86 aa26.94■■□□□ 1.9
CNTNAP3B-208ENST00000484254 ELP3Q9H9T3 547 aa26.94■■□□□ 1.9
CNTNAP3B-208ENST00000484254 CSADQ9Y600 493 aa26.94■■□□□ 1.9
CNTNAP3B-208ENST00000484254 GOLIM4O00461 696 aa26.93■■□□□ 1.9
CNTNAP3B-208ENST00000484254 LBX1P52954 281 aa26.93■■□□□ 1.9
CNTNAP3B-208ENST00000484254 ZSCAN29Q8IWY8 852 aaPredicted RBP26.93■■□□□ 1.9
CNTNAP3B-208ENST00000484254 WRNIP1Q96S55 665 aa26.93■■□□□ 1.9
CNTNAP3B-208ENST00000484254 HAUS7Q99871 368 aa26.93■■□□□ 1.9
CNTNAP3B-208ENST00000484254 PRDM10Q9NQV6 1147 aa26.93■■□□□ 1.9
CNTNAP3B-208ENST00000484254 DDTLA6NHG4 134 aaPredicted RBP26.92■■□□□ 1.9
CNTNAP3B-208ENST00000484254 TM4SF4P48230 202 aa26.92■■□□□ 1.9
CNTNAP3B-208ENST00000484254 EXOC6Q8TAG9 804 aa26.92■■□□□ 1.9
CNTNAP3B-208ENST00000484254 ECHDC1Q9NTX5 307 aa26.92■■□□□ 1.9
CNTNAP3B-208ENST00000484254 SAGE1Q9NXZ1 904 aa26.92■■□□□ 1.9
CNTNAP3B-208ENST00000484254 ZNF112Q9UJU3 913 aa26.92■■□□□ 1.9
CNTNAP3B-208ENST00000484254 ATRNL1Q5VV63 1379 aa26.92■■□□□ 1.9
CNTNAP3B-208ENST00000484254 SREBF2Q12772 1141 aa26.91■■□□□ 1.9
CNTNAP3B-208ENST00000484254 PAG1Q9NWQ8 432 aa26.91■■□□□ 1.9
CNTNAP3B-208ENST00000484254 RNF186Q9NXI6 227 aa26.91■■□□□ 1.9
CNTNAP3B-208ENST00000484254 COL2A1P02458 1487 aaPredicted RBP26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 MANSC4A6NHS7 340 aaPredicted RBP26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 GJA5P36382 358 aa26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 COL13A1Q5TAT6 717 aaPredicted RBP26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 CERS3Q8IU89 383 aa26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 ZKSCAN4Q969J2 545 aaPredicted RBP26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 OPTNQ96CV9 577 aa26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 EDC3Q96F86 508 aaKnown RBP26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 GPATCH3Q96I76 525 aa26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 OSBPL5Q9H0X9 879 aaPredicted RBP26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 TSKSQ9UJT2 592 aa26.9■■□□□ 1.9
CNTNAP3B-208ENST00000484254 DYNLL1P63167 89 aaKnown RBP26.89■■□□□ 1.9
CNTNAP3B-208ENST00000484254 MAP3K10Q02779 954 aa26.89■■□□□ 1.9
CNTNAP3B-208ENST00000484254 SLC9C2Q5TAH2 1124 aa26.89■■□□□ 1.9
CNTNAP3B-208ENST00000484254 GCC1Q96CN9 775 aa26.89■■□□□ 1.9
CNTNAP3B-208ENST00000484254 SNCAIPQ9Y6H5 919 aa26.89■■□□□ 1.9
CNTNAP3B-208ENST00000484254 TRPA1O75762 1119 aa26.88■■□□□ 1.89
CNTNAP3B-208ENST00000484254 PDE6AP16499 860 aa26.88■■□□□ 1.89
CNTNAP3B-208ENST00000484254 INHBEP58166 350 aa26.88■■□□□ 1.89
CNTNAP3B-208ENST00000484254 MIGA1Q8NAN2 632 aa26.88■■□□□ 1.89
CNTNAP3B-208ENST00000484254 LAMB1P07942 1786 aa26.88■■□□□ 1.89
CNTNAP3B-208ENST00000484254 SPDYE5A6NIY4 337 aa26.87■■□□□ 1.89
CNTNAP3B-208ENST00000484254 INPP5BP32019 993 aa26.87■■□□□ 1.89
CNTNAP3B-208ENST00000484254 TGFBRAP1Q8WUH2 860 aa26.87■■□□□ 1.89
CNTNAP3B-208ENST00000484254 CNKSR2Q8WXI2 1034 aa26.87■■□□□ 1.89
CNTNAP3B-208ENST00000484254 CDK5RAP2Q96SN8 1893 aa26.86■■□□□ 1.89
CNTNAP3B-208ENST00000484254 FOCADQ5VW36 1801 aa26.86■■□□□ 1.89
CNTNAP3B-208ENST00000484254 PHF20L1A8MW92 1017 aa26.85■■□□□ 1.89
CNTNAP3B-208ENST00000484254 TBC1D12O60347 775 aa26.85■■□□□ 1.89
CNTNAP3B-208ENST00000484254 NOL9Q5SY16 702 aaKnown RBP26.85■■□□□ 1.89
CNTNAP3B-208ENST00000484254 ERO1BQ86YB8 467 aa26.85■■□□□ 1.89
CNTNAP3B-208ENST00000484254 MAPKAPK5Q8IW41 473 aa26.85■■□□□ 1.89
CNTNAP3B-208ENST00000484254 OTUD5Q96G74 571 aa26.85■■□□□ 1.89
CNTNAP3B-208ENST00000484254 RWDD1Q9H446 243 aaPredicted RBP26.85■■□□□ 1.89
CNTNAP3B-208ENST00000484254 FLT1P17948 1338 aa26.85■■□□□ 1.89
CNTNAP3B-208ENST00000484254 ZNF532Q9HCE3 1301 aa26.85■■□□□ 1.89
CNTNAP3B-208ENST00000484254 TCRBV5S4A2TA0A5A2 114 aa26.84■■□□□ 1.89
CNTNAP3B-208ENST00000484254 ANKRD45Q5TZF3 282 aa26.84■■□□□ 1.89
CNTNAP3B-208ENST00000484254 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.84■■□□□ 1.89
CNTNAP3B-208ENST00000484254 DHX36Q9H2U1 1008 aaKnown RBP26.84■■□□□ 1.89
CNTNAP3B-208ENST00000484254 ZBTB47Q9UFB7 747 aaPredicted RBP26.84■■□□□ 1.89
CNTNAP3B-208ENST00000484254 TTC41PQ6P2S7 1318 aa26.84■■□□□ 1.89
CNTNAP3B-208ENST00000484254 TSHZ3Q63HK5 1081 aa26.83■■□□□ 1.89
CNTNAP3B-208ENST00000484254 RIOK1Q9BRS2 568 aaKnown RBP26.83■■□□□ 1.89
CNTNAP3B-208ENST00000484254 MAGEB6P1A0A0J9YX57 407 aa26.82■■□□□ 1.88
CNTNAP3B-208ENST00000484254 TESPA1A2RU30 521 aaPredicted RBP26.82■■□□□ 1.88
CNTNAP3B-208ENST00000484254 SLURP2P0DP57 97 aa26.82■■□□□ 1.88
CNTNAP3B-208ENST00000484254 ADD2P35612 726 aa26.82■■□□□ 1.88
CNTNAP3B-208ENST00000484254 IFNL1Q8IU54 200 aa26.82■■□□□ 1.88
CNTNAP3B-208ENST00000484254 OTUD7AQ8TE49 926 aaPredicted RBP26.82■■□□□ 1.88
CNTNAP3B-208ENST00000484254 MS4A4AQ96JQ5 239 aa26.82■■□□□ 1.88
CNTNAP3B-208ENST00000484254 GTF2A2P52657 109 aa26.81■■□□□ 1.88
CNTNAP3B-208ENST00000484254 PPATQ06203 517 aa26.81■■□□□ 1.88
CNTNAP3B-208ENST00000484254 PPIL2Q13356 520 aa26.81■■□□□ 1.88
CNTNAP3B-208ENST00000484254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.81■■□□□ 1.88
CNTNAP3B-208ENST00000484254 PI4KBQ9UBF8 816 aa26.81■■□□□ 1.88
CNTNAP3B-208ENST00000484254 ALDH1A1P00352 501 aa26.8■■□□□ 1.88
CNTNAP3B-208ENST00000484254 USP5P45974 858 aa26.8■■□□□ 1.88
CNTNAP3B-208ENST00000484254 SMC5Q8IY18 1101 aa26.8■■□□□ 1.88
CNTNAP3B-208ENST00000484254 SCYL3Q8IZE3 742 aa26.8■■□□□ 1.88
CNTNAP3B-208ENST00000484254 IGF2BP3O00425 579 aaKnown RBP eCLIP26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 IRF6O14896 467 aa26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 ERC2O15083 957 aa26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 CTNND1O60716 968 aaKnown RBP26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 IGHDP01880 384 aa26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 MX1P20591 662 aa26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 ZSCAN25Q6NSZ9 544 aa26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 CFHR5Q9BXR6 569 aa26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 HERC5Q9UII4 1024 aaKnown RBP26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 PALD1Q9ULE6 856 aa26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 SALL3Q9BXA9 1300 aa26.79■■□□□ 1.88
CNTNAP3B-208ENST00000484254 FAM196BA6NMK8 535 aa26.78■■□□□ 1.88
CNTNAP3B-208ENST00000484254 UBE3CQ15386 1083 aa26.78■■□□□ 1.88
CNTNAP3B-208ENST00000484254 OTUD7BQ6GQQ9 843 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms