RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 ANTXR1Q9H6X2 564 aa18.39■□□□□ 0.53
COL16A1-213ENST00000482910 DDX4Q9NQI0 724 aaKnown RBP18.39■□□□□ 0.53
COL16A1-213ENST00000482910 ZNF112Q9UJU3 913 aa18.39■□□□□ 0.53
COL16A1-213ENST00000482910 CSADQ9Y600 493 aa18.39■□□□□ 0.53
COL16A1-213ENST00000482910 FOCADQ5VW36 1801 aa18.38■□□□□ 0.53
COL16A1-213ENST00000482910 MANSC4A6NHS7 340 aaPredicted RBP18.38■□□□□ 0.53
COL16A1-213ENST00000482910 SMARCA5O60264 1052 aaPredicted RBP18.38■□□□□ 0.53
COL16A1-213ENST00000482910 MAP3K10Q02779 954 aa18.38■□□□□ 0.53
COL16A1-213ENST00000482910 VGLL4Q14135 290 aa18.38■□□□□ 0.53
COL16A1-213ENST00000482910 TEX11Q8IYF3 940 aa18.38■□□□□ 0.53
COL16A1-213ENST00000482910 WRNIP1Q96S55 665 aa18.38■□□□□ 0.53
COL16A1-213ENST00000482910 NDUFB9Q9Y6M9 179 aa18.38■□□□□ 0.53
COL16A1-213ENST00000482910 CDK5RAP2Q96SN8 1893 aa18.37■□□□□ 0.53
COL16A1-213ENST00000482910 CYP7A1P22680 504 aa18.37■□□□□ 0.53
COL16A1-213ENST00000482910 LBX1P52954 281 aa18.37■□□□□ 0.53
COL16A1-213ENST00000482910 SH3BP5LQ7L8J4 393 aa18.37■□□□□ 0.53
COL16A1-213ENST00000482910 ADGRA1Q86SQ6 560 aa18.37■□□□□ 0.53
COL16A1-213ENST00000482910 HAUS7Q99871 368 aa18.37■□□□□ 0.53
COL16A1-213ENST00000482910 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
COL16A1-213ENST00000482910 SPDYE5A6NIY4 337 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 PICALMQ13492 652 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 MIGA2Q7L4E1 593 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 ZSCAN29Q8IWY8 852 aaPredicted RBP18.36■□□□□ 0.53
COL16A1-213ENST00000482910 MAGEB6Q8N7X4 407 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 SH3RF3Q8TEJ3 882 aaPredicted RBP18.36■□□□□ 0.53
COL16A1-213ENST00000482910 GCC1Q96CN9 775 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 GPATCH3Q96I76 525 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 DNAJC2Q99543 621 aaKnown RBP18.36■□□□□ 0.53
COL16A1-213ENST00000482910 OSBPL5Q9H0X9 879 aaPredicted RBP18.36■□□□□ 0.53
COL16A1-213ENST00000482910 BOLA2Q9H3K6 86 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 ELP3Q9H9T3 547 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 ECHDC1Q9NTX5 307 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 RNF186Q9NXI6 227 aa18.36■□□□□ 0.53
COL16A1-213ENST00000482910 SUPT16HQ9Y5B9 1047 aaKnown RBP18.36■□□□□ 0.53
COL16A1-213ENST00000482910 DDTLA6NHG4 134 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-213ENST00000482910 GOLIM4O00461 696 aa18.35■□□□□ 0.53
COL16A1-213ENST00000482910 TBC1D12O60347 775 aa18.35■□□□□ 0.53
COL16A1-213ENST00000482910 GJA5P36382 358 aa18.35■□□□□ 0.53
COL16A1-213ENST00000482910 NOL9Q5SY16 702 aaKnown RBP18.35■□□□□ 0.53
COL16A1-213ENST00000482910 ERO1BQ86YB8 467 aa18.35■□□□□ 0.53
COL16A1-213ENST00000482910 OPTNQ96CV9 577 aa18.35■□□□□ 0.53
COL16A1-213ENST00000482910 PAG1Q9NWQ8 432 aa18.35■□□□□ 0.53
COL16A1-213ENST00000482910 SNCAIPQ9Y6H5 919 aa18.35■□□□□ 0.53
COL16A1-213ENST00000482910 MYH7P12883 1935 aa18.34■□□□□ 0.53
COL16A1-213ENST00000482910 TESPA1A2RU30 521 aaPredicted RBP18.34■□□□□ 0.53
COL16A1-213ENST00000482910 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
COL16A1-213ENST00000482910 CFHR5Q9BXR6 569 aa18.34■□□□□ 0.53
COL16A1-213ENST00000482910 BCL11AQ9H165 835 aa18.34■□□□□ 0.53
COL16A1-213ENST00000482910 DHX36Q9H2U1 1008 aaKnown RBP18.34■□□□□ 0.53
COL16A1-213ENST00000482910 PHF20L1A8MW92 1017 aa18.33■□□□□ 0.52
COL16A1-213ENST00000482910 TRPA1O75762 1119 aa18.33■□□□□ 0.52
COL16A1-213ENST00000482910 ALDH1A1P00352 501 aa18.33■□□□□ 0.52
COL16A1-213ENST00000482910 PDE6AP16499 860 aa18.33■□□□□ 0.52
COL16A1-213ENST00000482910 INPP5BP32019 993 aa18.33■□□□□ 0.52
COL16A1-213ENST00000482910 SLC9C2Q5TAH2 1124 aa18.33■□□□□ 0.52
COL16A1-213ENST00000482910 ZKSCAN4Q969J2 545 aaPredicted RBP18.33■□□□□ 0.52
COL16A1-213ENST00000482910 FLT1P17948 1338 aa18.32■□□□□ 0.52
COL16A1-213ENST00000482910 TTC41PQ6P2S7 1318 aa18.32■□□□□ 0.52
COL16A1-213ENST00000482910 PPIL2Q13356 520 aa18.32■□□□□ 0.52
COL16A1-213ENST00000482910 NOM1Q5C9Z4 860 aaKnown RBP18.32■□□□□ 0.52
COL16A1-213ENST00000482910 TGFBRAP1Q8WUH2 860 aa18.32■□□□□ 0.52
COL16A1-213ENST00000482910 MS4A4AQ96JQ5 239 aa18.32■□□□□ 0.52
COL16A1-213ENST00000482910 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL16A1-213ENST00000482910 PI4KBQ9UBF8 816 aa18.32■□□□□ 0.52
COL16A1-213ENST00000482910 TCRBV5S4A2TA0A5A2 114 aa18.31■□□□□ 0.52
COL16A1-213ENST00000482910 GTF2A2P52657 109 aa18.31■□□□□ 0.52
COL16A1-213ENST00000482910 DYNLL1P63167 89 aaKnown RBP18.31■□□□□ 0.52
COL16A1-213ENST00000482910 PPATQ06203 517 aa18.31■□□□□ 0.52
COL16A1-213ENST00000482910 IFNL1Q8IU54 200 aa18.31■□□□□ 0.52
COL16A1-213ENST00000482910 MIGA1Q8NAN2 632 aa18.31■□□□□ 0.52
COL16A1-213ENST00000482910 EXOC6Q8TAG9 804 aa18.31■□□□□ 0.52
COL16A1-213ENST00000482910 EDC3Q96F86 508 aaKnown RBP18.31■□□□□ 0.52
COL16A1-213ENST00000482910 OTUD5Q96G74 571 aa18.31■□□□□ 0.52
COL16A1-213ENST00000482910 RIOK1Q9BRS2 568 aaKnown RBP18.31■□□□□ 0.52
COL16A1-213ENST00000482910 RWDD1Q9H446 243 aaPredicted RBP18.31■□□□□ 0.52
COL16A1-213ENST00000482910 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
COL16A1-213ENST00000482910 HERC5Q9UII4 1024 aaKnown RBP18.31■□□□□ 0.52
COL16A1-213ENST00000482910 TSKSQ9UJT2 592 aa18.31■□□□□ 0.52
COL16A1-213ENST00000482910 ZNF532Q9HCE3 1301 aa18.3■□□□□ 0.52
COL16A1-213ENST00000482910 ERC2O15083 957 aa18.3■□□□□ 0.52
COL16A1-213ENST00000482910 CTNND1O60716 968 aaKnown RBP18.3■□□□□ 0.52
COL16A1-213ENST00000482910 ADD2P35612 726 aa18.3■□□□□ 0.52
COL16A1-213ENST00000482910 OTUD7BQ6GQQ9 843 aa18.3■□□□□ 0.52
COL16A1-213ENST00000482910 METTL16Q86W50 562 aaKnown RBP18.3■□□□□ 0.52
COL16A1-213ENST00000482910 TNS4Q8IZW8 715 aa18.3■□□□□ 0.52
COL16A1-213ENST00000482910 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
COL16A1-213ENST00000482910 SIPA1L1O43166 1804 aa18.3■□□□□ 0.52
COL16A1-213ENST00000482910 CASP8AP2Q9UKL3 1982 aa18.3■□□□□ 0.52
COL16A1-213ENST00000482910 MYH1P12882 1939 aa18.29■□□□□ 0.52
COL16A1-213ENST00000482910 DOCK1Q14185 1865 aa18.29■□□□□ 0.52
COL16A1-213ENST00000482910 MAGEB6P1A0A0J9YX57 407 aa18.29■□□□□ 0.52
COL16A1-213ENST00000482910 UBE3CQ15386 1083 aa18.29■□□□□ 0.52
COL16A1-213ENST00000482910 ZSCAN25Q6NSZ9 544 aa18.29■□□□□ 0.52
COL16A1-213ENST00000482910 MAPKAPK5Q8IW41 473 aa18.29■□□□□ 0.52
COL16A1-213ENST00000482910 SMC5Q8IY18 1101 aa18.29■□□□□ 0.52
COL16A1-213ENST00000482910 SCYL3Q8IZE3 742 aa18.29■□□□□ 0.52
COL16A1-213ENST00000482910 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
COL16A1-213ENST00000482910 SALL3Q9BXA9 1300 aa18.28■□□□□ 0.52
COL16A1-213ENST00000482910 IGF2BP3O00425 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
COL16A1-213ENST00000482910 IRF6O14896 467 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms