RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 PRR12Q9ULL5 1215 aa9.57□□□□□ -0.88
SNX13-208ENST00000482558 RIPOR2Q9Y4F9 1068 aa9.57□□□□□ -0.88
SNX13-208ENST00000482558 KDRP35968 1356 aa9.57□□□□□ -0.88
SNX13-208ENST00000482558 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 FMN2Q9NZ56 1722 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 VIRMAQ69YN4 1812 aaKnown RBP9.56□□□□□ -0.88
SNX13-208ENST00000482558 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
SNX13-208ENST00000482558 SCO2A0A1W2PP80 73 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 ELOA3DA6NLF2 546 aaPredicted RBP9.56□□□□□ -0.88
SNX13-208ENST00000482558 TATP17735 454 aaPredicted RBP9.56□□□□□ -0.88
SNX13-208ENST00000482558 SERPINB4P48594 390 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 GDF10P55107 478 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 PCBP4P57723 403 aaKnown RBP9.56□□□□□ -0.88
SNX13-208ENST00000482558 TWISTNBQ3B726 338 aaPredicted RBP9.56□□□□□ -0.88
SNX13-208ENST00000482558 ELOA3BQ3SY89 546 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 SULT6B1Q6IMI4 303 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 FBXO33Q7Z6M2 555 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 KRTAP1-3Q8IUG1 177 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 ZNF295-AS1Q8N0V1 137 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 ELOA3Q8NG57 546 aa9.56□□□□□ -0.88
SNX13-208ENST00000482558 RTF1Q92541 710 aaKnown RBP9.56□□□□□ -0.88
SNX13-208ENST00000482558 CHD2O14647 1828 aaKnown RBP9.55□□□□□ -0.88
SNX13-208ENST00000482558 CHL1O00533 1208 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 ALAS2P22557 587 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 ATP2B4P23634 1241 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 AMPHP49418 695 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 BECN1Q14457 450 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 FOXD4L6Q3SYB3 417 aaPredicted RBP9.55□□□□□ -0.88
SNX13-208ENST00000482558 ARTNQ5T4W7 220 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 FOXD4L3Q6VB84 417 aaPredicted RBP9.55□□□□□ -0.88
SNX13-208ENST00000482558 TMEM57Q8N5G2 664 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
SNX13-208ENST00000482558 TSEN2Q8NCE0 465 aaKnown RBP9.55□□□□□ -0.88
SNX13-208ENST00000482558 MDFIQ99750 246 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 ZNF358Q9NW07 568 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 MARK1Q9P0L2 795 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 LAS1LQ9Y4W2 734 aaKnown RBP9.55□□□□□ -0.88
SNX13-208ENST00000482558 PPME1Q9Y570 386 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 ABCC4O15439 1325 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 PTPRCP08575 1304 aa9.55□□□□□ -0.88
SNX13-208ENST00000482558 LOC102724159A0A0B4J2E5 919 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 M0R2N6 131 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 EFSO43281 561 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 DYRK3O43781 588 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 APBA3O96018 575 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 KCNA6P17658 529 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 PWP2Q15269 919 aaKnown RBP9.54□□□□□ -0.88
SNX13-208ENST00000482558 KCNH5Q8NCM2 988 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 ZIC5Q96T25 663 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 HINFPQ9BQA5 517 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 TPSG1Q9NRR2 321 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 ADAMTSL3P82987 1691 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 DLG5Q8TDM6 1919 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 MAP3K19Q56UN5 1328 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 IGSF1Q8N6C5 1336 aa9.54□□□□□ -0.88
SNX13-208ENST00000482558 TMEM229AB2RXF0 380 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 CDK2AP1O14519 115 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 PRMT3O60678 531 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 RAB11FIP3O75154 756 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 MTFR1Q15390 333 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 SLC4A9Q96Q91 983 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 TANGO6Q9C0B7 1094 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 ZFP64Q9NPA5 681 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 PRDM6Q9NQX0 595 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 ADGRL3Q9HAR2 1447 aa9.53□□□□□ -0.88
SNX13-208ENST00000482558 BACH1O14867 736 aa9.52□□□□□ -0.89
SNX13-208ENST00000482558 FBLN1P23142 703 aa9.52□□□□□ -0.89
SNX13-208ENST00000482558 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
SNX13-208ENST00000482558 NACC1Q96RE7 527 aa9.52□□□□□ -0.89
SNX13-208ENST00000482558 LNPKQ9C0E8 428 aa9.52□□□□□ -0.89
SNX13-208ENST00000482558 METTL14Q9HCE5 456 aaKnown RBP9.52□□□□□ -0.89
SNX13-208ENST00000482558 IQSEC3Q9UPP2 1182 aaPredicted RBP9.52□□□□□ -0.89
SNX13-208ENST00000482558 GJA3Q9Y6H8 435 aa9.52□□□□□ -0.89
SNX13-208ENST00000482558 PIK3C2AO00443 1686 aa9.51□□□□□ -0.89
SNX13-208ENST00000482558 PEAK1Q9H792 1746 aa9.51□□□□□ -0.89
SNX13-208ENST00000482558 TLDC2A0PJX2 215 aa9.51□□□□□ -0.89
SNX13-208ENST00000482558 NUCB1Q02818 461 aa9.51□□□□□ -0.89
SNX13-208ENST00000482558 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
SNX13-208ENST00000482558 ABTB2Q8N961 1025 aa9.51□□□□□ -0.89
SNX13-208ENST00000482558 PIK3R5Q8WYR1 880 aa9.51□□□□□ -0.89
SNX13-208ENST00000482558 DNAJC2Q99543 621 aaKnown RBP9.51□□□□□ -0.89
SNX13-208ENST00000482558 SERTAD1Q9UHV2 236 aa9.51□□□□□ -0.89
SNX13-208ENST00000482558 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.51□□□□□ -0.89
SNX13-208ENST00000482558 NPHP4O75161 1426 aaPredicted RBP9.5□□□□□ -0.89
SNX13-208ENST00000482558 ADARB2-AS1A8MUL3 147 aa9.5□□□□□ -0.89
SNX13-208ENST00000482558 SCAMP3O14828 347 aaKnown RBP9.5□□□□□ -0.89
SNX13-208ENST00000482558 SIN3BO75182 1162 aa9.5□□□□□ -0.89
SNX13-208ENST00000482558 LGR5O75473 907 aa9.5□□□□□ -0.89
SNX13-208ENST00000482558 TMED8Q6PL24 325 aaPredicted RBP9.5□□□□□ -0.89
SNX13-208ENST00000482558 RPAP2Q8IXW5 612 aaPredicted RBP9.5□□□□□ -0.89
SNX13-208ENST00000482558 KRTAP4-12Q9BQ66 201 aa9.5□□□□□ -0.89
SNX13-208ENST00000482558 CRB1P82279 1406 aa9.49□□□□□ -0.89
SNX13-208ENST00000482558 NCOA3Q9Y6Q9 1424 aa9.49□□□□□ -0.89
SNX13-208ENST00000482558 A6NJY4 79 aa9.49□□□□□ -0.89
SNX13-208ENST00000482558 GNAT3A8MTJ3 354 aa9.49□□□□□ -0.89
SNX13-208ENST00000482558 HOXC9P31274 260 aa9.49□□□□□ -0.89
SNX13-208ENST00000482558 OCLNQ16625 522 aa9.49□□□□□ -0.89
SNX13-208ENST00000482558 CCDC181Q5TID7 509 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms