RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PRR29P0C7W0 189 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 CDC27P30260 824 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 AXDND1Q5T1B0 1012 aaPredicted RBP14.51□□□□□ -0.09
VPS52-218ENST00000482399 VSTM4Q8IW00 320 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 GUCA1BQ9UMX6 200 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 EVA1CP58658 441 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 KIF6Q6ZMV9 814 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 TXLNBQ8N3L3 684 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 SUGCTQ9HAC7 445 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 ERLIN1O75477 346 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 DNA2P51530 1060 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 DHX8Q14562 1220 aaKnown RBP14.5□□□□□ -0.09
VPS52-218ENST00000482399 ARMT1Q9H993 441 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 AKR1B15C9JRZ8 316 aaPredicted RBP14.5□□□□□ -0.09
VPS52-218ENST00000482399 TADA3O75528 432 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 APOA5Q6Q788 366 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 CYB5R4Q7L1T6 521 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 PLIN2Q99541 437 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 MPHOSPH8Q99549 860 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 BLZF1Q9H2G9 400 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 LRP2BPQ9P2M1 347 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 ZNF532Q9HCE3 1301 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 TECPR2O15040 1411 aa14.5□□□□□ -0.09
VPS52-218ENST00000482399 PXDNQ92626 1479 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 ZFYP08048 801 aaPredicted RBP14.49□□□□□ -0.09
VPS52-218ENST00000482399 H2AFXP16104 143 aaPredicted RBP14.49□□□□□ -0.09
VPS52-218ENST00000482399 ATF3P18847 181 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 USP49Q70CQ1 688 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 METTL16Q86W50 562 aaKnown RBP14.49□□□□□ -0.09
VPS52-218ENST00000482399 MAGEB6Q8N7X4 407 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 ANKRD20A12PQ8NF67 263 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 L2HGDHQ9H9P8 463 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 PRDM11Q9NQV5 511 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 TEX33O43247 280 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 RANBP6O60518 1105 aaKnown RBP14.49□□□□□ -0.09
VPS52-218ENST00000482399 PRDM1O75626 825 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 MBD4O95243 580 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 ANTXR2P58335 489 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 FMR1Q06787 632 aaKnown RBP eCLIP14.49□□□□□ -0.09
VPS52-218ENST00000482399 RTN1Q16799 776 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 LONRF2Q1L5Z9 754 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 MFSD6Q6ZSS7 791 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 TBC1D10CQ8IV04 446 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 DCAF5Q96JK2 942 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 CDC5LQ99459 802 aaKnown RBP14.49□□□□□ -0.09
VPS52-218ENST00000482399 TRMT112Q9UI30 125 aaKnown RBP14.49□□□□□ -0.09
VPS52-218ENST00000482399 PARP3Q9Y6F1 533 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 CYP27B1O15528 508 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 MATR3P43243 847 aaKnown RBP eCLIP14.49□□□□□ -0.09
VPS52-218ENST00000482399 ZNF174Q15697 407 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 CC2D1AQ6P1N0 951 aaPredicted RBP14.49□□□□□ -0.09
VPS52-218ENST00000482399 NUTM2AQ8IVF1 878 aaPredicted RBP14.49□□□□□ -0.09
VPS52-218ENST00000482399 DRC1Q96MC2 740 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 SLF1Q9BQI6 1058 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 HPS5Q9UPZ3 1129 aa14.49□□□□□ -0.09
VPS52-218ENST00000482399 VWA3AA6NCI4 1184 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 ZMYND10O75800 440 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 EIF3JO75822 258 aaKnown RBP14.48□□□□□ -0.09
VPS52-218ENST00000482399 GTF2E1P29083 439 aaPredicted RBP14.48□□□□□ -0.09
VPS52-218ENST00000482399 RAD51AP2Q09MP3 1159 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 ACRBPQ8NEB7 543 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 MAN1B1Q9UKM7 699 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 IKBKBO14920 756 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 TRIM66O15016 1216 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 GUCY1A2P33402 732 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 FOXO4P98177 505 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 WTAPQ15007 396 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 VPS54Q9P1Q0 977 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 PHLPP2Q6ZVD8 1323 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 A0A0U1RQJ8 604 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 GOLGA6L9A6NEM1 432 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 NBPF26B4DH59 902 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 CUTAO60888 179 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 SASH3O75995 380 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 IPO7O95373 1038 aaKnown RBP14.48□□□□□ -0.09
VPS52-218ENST00000482399 NBPF14Q5TI25 921 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 RRAGBQ5VZM2 374 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 NBPF10Q6P3W6 841 aaKnown RBP14.48□□□□□ -0.09
VPS52-218ENST00000482399 FOXP4Q8IVH2 680 aaPredicted RBP14.48□□□□□ -0.09
VPS52-218ENST00000482399 NBPF15Q8N660 670 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 GPR161Q8N6U8 529 aaKnown RBP14.48□□□□□ -0.09
VPS52-218ENST00000482399 RGS22Q8NE09 1264 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 ATRIPQ8WXE1 791 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 TMEM51Q9NW97 253 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 PCDHB6Q9Y5E3 794 aa14.48□□□□□ -0.09
VPS52-218ENST00000482399 CTAGE9A4FU28 777 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 ENC1O14682 589 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 C3P01024 1663 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 ERCC3P19447 782 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 CYP2C19P33261 490 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 REXO1L1PQ8IX06 675 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 ERBB3P21860 1342 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 RBL2Q08999 1139 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 DNAJC21Q5F1R6 531 aaKnown RBP14.47□□□□□ -0.09
VPS52-218ENST00000482399 NOSTRINQ8IVI9 506 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 MB21D2Q8IYB1 491 aaPredicted RBP14.47□□□□□ -0.09
VPS52-218ENST00000482399 KLHL34Q8N239 644 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 C19orf44Q9H6X5 657 aa14.47□□□□□ -0.09
VPS52-218ENST00000482399 MRPL44Q9H9J2 332 aaKnown RBP14.47□□□□□ -0.09
VPS52-218ENST00000482399 CTAGE15A4D2H0 777 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms