RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 MECOMQ03112 1051 aa16.55■□□□□ 0.24
CTDSP1-208ENST00000482272 OS9Q13438 667 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-208ENST00000482272 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
CTDSP1-208ENST00000482272 SSH3Q8TE77 659 aa16.55■□□□□ 0.24
CTDSP1-208ENST00000482272 MAST2Q6P0Q8 1798 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 MROH7-TTC4A0A0A0MT08 1334 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 GPR75-ASB3A0A0A6YYF3 556 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 TLR2O60603 784 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 MAP4K4O95819 1239 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 ARID4AP29374 1257 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 KIF22Q14807 665 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 CCDC158Q5M9N0 1113 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 NOL9Q5SY16 702 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 TBC1D9Q6ZT07 1266 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 ITPRIPQ8IWB1 547 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 GPR108Q9NPR9 543 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 DDX4Q9NQI0 724 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 RAI14Q9P0K7 980 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
CTDSP1-208ENST00000482272 MCAMP43121 646 aa16.53■□□□□ 0.24
CTDSP1-208ENST00000482272 PICALMQ13492 652 aa16.53■□□□□ 0.24
CTDSP1-208ENST00000482272 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
CTDSP1-208ENST00000482272 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
CTDSP1-208ENST00000482272 KCNH4Q9UQ05 1017 aa16.53■□□□□ 0.24
CTDSP1-208ENST00000482272 SIPA1L1O43166 1804 aa16.53■□□□□ 0.24
CTDSP1-208ENST00000482272 PHIPQ8WWQ0 1821 aa16.53■□□□□ 0.24
CTDSP1-208ENST00000482272 MAP3K10Q02779 954 aa16.52■□□□□ 0.24
CTDSP1-208ENST00000482272 TNNI3KQ59H18 835 aa16.52■□□□□ 0.24
CTDSP1-208ENST00000482272 TTC39AQ5SRH9 613 aa16.52■□□□□ 0.24
CTDSP1-208ENST00000482272 ANKRD23Q86SG2 305 aa16.52■□□□□ 0.24
CTDSP1-208ENST00000482272 NSUN4Q96CB9 384 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-208ENST00000482272 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-208ENST00000482272 PICK1Q9NRD5 415 aa16.52■□□□□ 0.24
CTDSP1-208ENST00000482272 FPGT-TNNI3KV9GXZ4 949 aa16.52■□□□□ 0.24
CTDSP1-208ENST00000482272 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-208ENST00000482272 PDHXO00330 501 aa16.51■□□□□ 0.23
CTDSP1-208ENST00000482272 CXCL11O14625 94 aa16.51■□□□□ 0.23
CTDSP1-208ENST00000482272 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-208ENST00000482272 RHBDL3P58872 404 aa16.51■□□□□ 0.23
CTDSP1-208ENST00000482272 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
CTDSP1-208ENST00000482272 DBNDD2Q9BQY9 259 aa16.51■□□□□ 0.23
CTDSP1-208ENST00000482272 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-208ENST00000482272 DOCK1Q14185 1865 aa16.5■□□□□ 0.23
CTDSP1-208ENST00000482272 PHF20L1A8MW92 1017 aa16.5■□□□□ 0.23
CTDSP1-208ENST00000482272 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-208ENST00000482272 GNRH1P01148 92 aa16.5■□□□□ 0.23
CTDSP1-208ENST00000482272 MS4A1P11836 297 aa16.5■□□□□ 0.23
CTDSP1-208ENST00000482272 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
CTDSP1-208ENST00000482272 NOP58Q9Y2X3 529 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-208ENST00000482272 ZHX2Q9Y6X8 837 aa16.5■□□□□ 0.23
CTDSP1-208ENST00000482272 PTPRFP10586 1907 aa16.5■□□□□ 0.23
CTDSP1-208ENST00000482272 FOCADQ5VW36 1801 aa16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 CENPFP49454 3210 aa16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 TBC1D12O60347 775 aa16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 IGSF3O75054 1194 aa16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 BAG3O95817 575 aa16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 PTPRAP18433 802 aa16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 LACTBP83111 547 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 MOGSQ13724 837 aa16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 CEP85Q6P2H3 762 aa16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 FASTKD5Q7L8L6 764 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-208ENST00000482272 ATAD5Q96QE3 1844 aa16.48■□□□□ 0.23
CTDSP1-208ENST00000482272 BRCA2P51587 3418 aa16.48■□□□□ 0.23
CTDSP1-208ENST00000482272 NAA16Q6N069 864 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-208ENST00000482272 C17orf99Q6UX52 265 aa16.48■□□□□ 0.23
CTDSP1-208ENST00000482272 ARMC5Q96C12 935 aa16.48■□□□□ 0.23
CTDSP1-208ENST00000482272 ZNF512BQ96KM6 892 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-208ENST00000482272 TMEM106CQ9BVX2 250 aa16.48■□□□□ 0.23
CTDSP1-208ENST00000482272 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.235e-6■□□□□ 10.3
CTDSP1-208ENST00000482272 PRMT2P55345 433 aa16.47■□□□□ 0.23
CTDSP1-208ENST00000482272 SLC9C1Q4G0N8 1177 aa16.47■□□□□ 0.23
CTDSP1-208ENST00000482272 ADGRA1Q86SQ6 560 aa16.47■□□□□ 0.23
CTDSP1-208ENST00000482272 PARK7Q99497 189 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-208ENST00000482272 CPA4Q9UI42 421 aa16.47■□□□□ 0.23
CTDSP1-208ENST00000482272 DBNLQ9UJU6 430 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-208ENST00000482272 AFG3L2Q9Y4W6 797 aa16.47■□□□□ 0.23
CTDSP1-208ENST00000482272 PTCH2Q9Y6C5 1203 aa16.47■□□□□ 0.23
CTDSP1-208ENST00000482272 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-208ENST00000482272 PLCG2P16885 1265 aa16.46■□□□□ 0.23
CTDSP1-208ENST00000482272 HOXD10P28358 340 aa16.46■□□□□ 0.23
CTDSP1-208ENST00000482272 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
CTDSP1-208ENST00000482272 EAF2Q96CJ1 260 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-208ENST00000482272 ARHGAP39Q9C0H5 1083 aa16.46■□□□□ 0.23
CTDSP1-208ENST00000482272 CCDC8Q9H0W5 538 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-208ENST00000482272 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-208ENST00000482272 A0A0G2JLL6 359 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 POTEFA5A3E0 1075 aa16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 FAM196BA6NMK8 535 aa16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 GPAT2Q6NUI2 795 aa16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 PRRT2Q7Z6L0 340 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 CCDC84Q86UT8 332 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 ERC1Q8IUD2 1116 aa16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 DHX36Q9H2U1 1008 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 PIH1D3Q9NQM4 214 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 AATFQ9NY61 560 aaKnown RBP eCLIP16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 EXOC6BQ9Y2D4 811 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 370.6 ms