RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 APBB1O00213 710 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 ORC4O43929 436 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 ADD2P35612 726 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 MAP2K2P36507 400 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 SCNN1DP51172 638 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 ANAPC15P60006 121 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 TFCP2Q12800 502 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 PABPC4Q13310 644 aaKnown RBP eCLIP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 OS9Q13438 667 aaPredicted RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 ARHGEF6Q15052 776 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 KIF4BQ2VIQ3 1234 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 ZMYM1Q5SVZ6 1142 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 LBX2Q6XYB7 198 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 TTC6Q86TZ1 520 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 DHX37Q8IY37 1157 aaKnown RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 C16orf71Q8IYS4 520 aaPredicted RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 PI4K2BQ8TCG2 481 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 ANKS1AQ92625 1134 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 NSUN4Q96CB9 384 aaKnown RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 CRBNQ96SW2 442 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 WDR18Q9BV38 432 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 RNF41Q9H4P4 317 aaPredicted RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 AS3MTQ9HBK9 375 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 MYOZ2Q9NPC6 264 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 SEC31BQ9NQW1 1179 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 NSFL1CQ9UNZ2 370 aaKnown RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 COG6Q9Y2V7 657 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 YDJCA8MPS7 323 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 HLA-DOAP06340 250 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 HMGB1P09429 215 aaKnown RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 KCNQ4P56696 695 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 KRT32Q14532 448 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 DLGAP5Q15398 846 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 SH3D19Q5HYK7 790 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 GORABQ5T7V8 394 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 TTLL5Q6EMB2 1281 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 ARMC9Q7Z3E5 817 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 TRMT44Q8IYL2 757 aaKnown RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 PANK1Q8TE04 598 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 SEZ6LQ9BYH1 1024 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 ZNF341Q9BYN7 854 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 NACAP1Q9BZK3 213 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 PDGFDQ9GZP0 370 aaPredicted RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 CNNM2Q9H8M5 875 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 PAG1Q9NWQ8 432 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 DBNLQ9UJU6 430 aaKnown RBP3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 TLL2Q9Y6L7 1015 aa3.27□□□□□ -1.89
RAB3IP-206ENST00000481897 ZNF541Q9H0D2 1346 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 CNTNAP1P78357 1384 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 TCRBV5S4A2TA0A5A2 114 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 hCG_1984214I3L0E3 225 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 PSMD14O00487 310 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 CXCL11O14625 94 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 KIF3CO14782 793 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 RNF113AO15541 343 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 ST18O60284 1047 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 CRKP46108 304 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 IREB2P48200 963 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 PDE1AP54750 535 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 C1QTNF8P60827 252 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 SREBF2Q12772 1141 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 AOC3Q16853 763 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 LDLRAD1Q5T700 205 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 TTC22Q5TAA0 569 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 RASEFQ8IZ41 740 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 ZNF713Q8N859 430 aaPredicted RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 JMYQ8N9B5 988 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 DCPSQ96C86 337 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 YTHDC1Q96MU7 727 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 MAP3K20Q9NYL2 800 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 RBM27Q9P2N5 1060 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 NRBP1Q9UHY1 535 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 MYO5AQ9Y4I1 1855 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 LRRC37A2A6NM11 1700 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 MANSC4A6NHS7 340 aaPredicted RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 C19orf81C9J6K1 198 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 TCERG1O14776 1098 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 WDHD1O75717 1129 aaPredicted RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 GMPSP49915 693 aaPredicted RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 USP14P54578 494 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 PPIL2Q13356 520 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 RASGRF1Q13972 1273 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 LRRC24Q50LG9 513 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 MFSD14BQ5SR56 506 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 NAA16Q6N069 864 aaPredicted RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 AACSQ86V21 672 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 DZIP1Q86YF9 867 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 PROCA1Q8NCQ7 364 aaPredicted RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 HELBQ8NG08 1087 aaPredicted RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 EAF2Q96CJ1 260 aaPredicted RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 BCL2L13Q9BXK5 485 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 TM6SF1Q9BZW5 370 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 MKRN1Q9UHC7 482 aaKnown RBP3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 KCNH4Q9UQ05 1017 aa3.26□□□□□ -1.89
RAB3IP-206ENST00000481897 CTNND1O60716 968 aaKnown RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PIP4K2AP48426 406 aaPredicted RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 OAZ1P54368 228 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PPATQ06203 517 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 TKFCQ3LXA3 575 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 TATDN1Q6P1N9 297 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms