RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 USP5P45974 858 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 TNNI2P48788 182 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 RBM5P52756 815 aaKnown RBP eCLIP9.83□□□□□ -0.84
SYNE1-225ENST00000481502 FOXP4Q8IVH2 680 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-225ENST00000481502 MICALL2Q8IY33 904 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 MIGA1Q8NAN2 632 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 HOOK2Q96ED9 719 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 PRMT6Q96LA8 375 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-225ENST00000481502 TBC1D32Q96NH3 1257 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 MXD3Q9BW11 206 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 IL25Q9H293 177 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 RNF41Q9H4P4 317 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-225ENST00000481502 PGAP2Q9UHJ9 254 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 RBM8AQ9Y5S9 174 aaKnown RBP9.83□□□□□ -0.84
SYNE1-225ENST00000481502 FOXP2O15409 715 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 WDHD1O75717 1129 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-225ENST00000481502 DDNO94850 711 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-225ENST00000481502 SEC24BO95487 1268 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 CHGBP05060 677 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 TDO2P48775 406 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 DYNLL1P63167 89 aaKnown RBP9.82□□□□□ -0.84
SYNE1-225ENST00000481502 PTH1RQ03431 593 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 VPS53Q5VIR6 699 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 CCDC129Q6ZRS4 1044 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 APOBEC3FQ8IUX4 373 aaKnown RBP9.82□□□□□ -0.84
SYNE1-225ENST00000481502 SH3RF3Q8TEJ3 882 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-225ENST00000481502 FAM151AQ8WW52 585 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 EHD4Q9H223 541 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 CNNM2Q9H8M5 875 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 ZNF70Q9UC06 446 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-225ENST00000481502 HACL1Q9UJ83 578 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 ATRNL1Q5VV63 1379 aa9.82□□□□□ -0.84
SYNE1-225ENST00000481502 TBC1D12O60347 775 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 CYP21A2P08686 494 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 KIF4BQ2VIQ3 1234 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 C12orf60Q5U649 245 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 CREB3L3Q68CJ9 461 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 METTL16Q86W50 562 aaKnown RBP9.81□□□□□ -0.84
SYNE1-225ENST00000481502 FBXL16Q8N461 479 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 TGFBRAP1Q8WUH2 860 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 OSBPL5Q9H0X9 879 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-225ENST00000481502 MCM9Q9NXL9 1143 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 PI4KBQ9UBF8 816 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 SWAP70Q9UH65 585 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 SCN4AP35499 1836 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 FLT1P17948 1338 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 WDR19Q8NEZ3 1342 aa9.81□□□□□ -0.84
SYNE1-225ENST00000481502 ROBO3Q96MS0 1386 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 TIAM2Q8IVF5 1701 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 WDR90Q96KV7 1748 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 USP17L12C9JPN9 530 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 USP17L21D6R901 530 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 SLC27A2O14975 620 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 PRKAB2O43741 272 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 HLA-DOAP06340 250 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 VEGFAP15692 232 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-225ENST00000481502 MAP3K10Q02779 954 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 PDE4BQ07343 736 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 PPARAQ07869 468 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 TRDNQ13061 729 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 CCDC178Q5BJE1 867 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 CTR9Q6PD62 1173 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 SDR42E1Q8WUS8 393 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 STAG1Q8WVM7 1258 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 KRT23Q9C075 422 aa9.8□□□□□ -0.84
SYNE1-225ENST00000481502 ALDH8A1Q9H2A2 487 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-225ENST00000481502 TDRD3Q9H7E2 651 aaKnown RBP9.8□□□□□ -0.84
SYNE1-225ENST00000481502 EPB41L4AQ9HCS5 686 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-225ENST00000481502 HERC5Q9UII4 1024 aaKnown RBP9.8□□□□□ -0.84
SYNE1-225ENST00000481502 ORC4O43929 436 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 POLR3DP05423 398 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-225ENST00000481502 ATXN8OSP0DMR3 200 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 EPHX2P34913 555 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 EPS15P42566 896 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 RABEP1Q15276 862 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 NBPF9Q3BBW0 867 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 AKNAD1Q5T1N1 836 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 MFSD6Q6ZSS7 791 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 NCOA7Q8NI08 942 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 CCDC17Q96LX7 622 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 GINM1Q9NU53 330 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 SERPINB13Q9UIV8 391 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 SNX14Q9Y5W7 946 aa9.79□□□□□ -0.84
SYNE1-225ENST00000481502 MCM2P49736 904 aa9.78□□□□□ -0.84
SYNE1-225ENST00000481502 GABPAQ06546 454 aa9.78□□□□□ -0.84
SYNE1-225ENST00000481502 TBC1D10BQ4KMP7 808 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-225ENST00000481502 C16orf86Q6ZW13 317 aa9.78□□□□□ -0.84
SYNE1-225ENST00000481502 SAMD7Q7Z3H4 446 aa9.78□□□□□ -0.84
SYNE1-225ENST00000481502 MAPKAPK5Q8IW41 473 aa9.78□□□□□ -0.84
SYNE1-225ENST00000481502 TMTC2Q8N394 836 aa9.78□□□□□ -0.84
SYNE1-225ENST00000481502 NEK1Q96PY6 1258 aa9.78□□□□□ -0.84
SYNE1-225ENST00000481502 TAF1DQ9H5J8 278 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-225ENST00000481502 ZSWIM6Q9HCJ5 1215 aa9.78□□□□□ -0.84
SYNE1-225ENST00000481502 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
SYNE1-225ENST00000481502 FOCADQ5VW36 1801 aa9.77□□□□□ -0.84
SYNE1-225ENST00000481502 UNCXA6NJT0 531 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 POTECB2RU33 542 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 E7EWF7 191 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms