RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 HMG20BQ9P0W2 317 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 FOCADQ5VW36 1801 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 GNRH1P01148 92 aa14.93□□□□□ -0.02
SQSTM1-207ENST00000481335 INPP5BP32019 993 aa14.93□□□□□ -0.02
SQSTM1-207ENST00000481335 BTDP43251 543 aa14.93□□□□□ -0.02
SQSTM1-207ENST00000481335 MECOMQ03112 1051 aa14.93□□□□□ -0.02
SQSTM1-207ENST00000481335 CD99L2Q8TCZ2 262 aa14.93□□□□□ -0.02
SQSTM1-207ENST00000481335 ZNF512BQ96KM6 892 aaPredicted RBP14.93□□□□□ -0.02
SQSTM1-207ENST00000481335 PCDH10Q9P2E7 1040 aa14.93□□□□□ -0.02
SQSTM1-207ENST00000481335 PTPN22Q9Y2R2 807 aa14.93□□□□□ -0.02
SQSTM1-207ENST00000481335 KIAA0100Q14667 2235 aaKnown RBP14.93□□□□□ -0.02
SQSTM1-207ENST00000481335 PHIPQ8WWQ0 1821 aa14.92□□□□□ -0.02
SQSTM1-207ENST00000481335 MS4A1P11836 297 aa14.92□□□□□ -0.02
SQSTM1-207ENST00000481335 TNNI3KQ59H18 835 aa14.92□□□□□ -0.02
SQSTM1-207ENST00000481335 CCDC158Q5M9N0 1113 aa14.92□□□□□ -0.02
SQSTM1-207ENST00000481335 ANKRD23Q86SG2 305 aa14.92□□□□□ -0.02
SQSTM1-207ENST00000481335 ITPRIPQ8IWB1 547 aa14.92□□□□□ -0.02
SQSTM1-207ENST00000481335 NSUN4Q96CB9 384 aaKnown RBP14.92□□□□□ -0.02
SQSTM1-207ENST00000481335 NOP58Q9Y2X3 529 aaKnown RBP14.92□□□□□ -0.02
SQSTM1-207ENST00000481335 FPGT-TNNI3KV9GXZ4 949 aa14.92□□□□□ -0.02
SQSTM1-207ENST00000481335 CDK5RAP2Q96SN8 1893 aa14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 BTBD19C9JJ37 291 aa14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 CXCL11O14625 94 aa14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 ZBTB7BO15156 539 aaPredicted RBP14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 TBC1D12O60347 775 aa14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 MCAMP43121 646 aa14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 RHBDL3P58872 404 aa14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 OS9Q13438 667 aaPredicted RBP14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 ZSCAN29Q8IWY8 852 aaPredicted RBP14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 SCYL3Q8IZE3 742 aa14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 ARMC5Q96C12 935 aa14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 ATAD5Q96QE3 1844 aa14.91□□□□□ -0.02
SQSTM1-207ENST00000481335 BRCA2P51587 3418 aa14.9□□□□□ -0.02
SQSTM1-207ENST00000481335 PHF20L1A8MW92 1017 aa14.9□□□□□ -0.02
SQSTM1-207ENST00000481335 SURF6O75683 361 aaKnown RBP14.9□□□□□ -0.02
SQSTM1-207ENST00000481335 PRMT2P55345 433 aa14.9□□□□□ -0.02
SQSTM1-207ENST00000481335 KIF22Q14807 665 aa14.9□□□□□ -0.02
SQSTM1-207ENST00000481335 TMED8Q6PL24 325 aaPredicted RBP14.9□□□□□ -0.02
SQSTM1-207ENST00000481335 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.9□□□□□ -0.02
SQSTM1-207ENST00000481335 PICK1Q9NRD5 415 aa14.9□□□□□ -0.02
SQSTM1-207ENST00000481335 MYO5AQ9Y4I1 1855 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 CTNND1O60716 968 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 PLCG2P16885 1265 aa14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 TTC39AQ5SRH9 613 aa14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 ZFPM1Q8IX07 1006 aa14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 ZNF384Q8TF68 577 aa14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 NOL10Q9BSC4 688 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 TBC1D2Q9BYX2 928 aa14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 DDX4Q9NQI0 724 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 RAI14Q9P0K7 980 aa14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 LRP2BPQ9P2M1 347 aa14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 MGAMO43451 1857 aa14.89□□□□□ -0.03
SQSTM1-207ENST00000481335 DDTLA6NHG4 134 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 BAG3O95817 575 aa14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 RLBP1P12271 317 aa14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 LACTBP83111 547 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 PI16Q6UXB8 463 aa14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 SH3BP5LQ7L8J4 393 aa14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 FASTKD5Q7L8L6 764 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 NBPF11Q86T75 865 aa14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 CERS3Q8IU89 383 aa14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 ERC1Q8IUD2 1116 aa14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 PARK7Q99497 189 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 SLC45A1Q9Y2W3 748 aa14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 ADGRA2Q96PE1 1338 aa14.88□□□□□ -0.03
SQSTM1-207ENST00000481335 A0A0G2JLL6 359 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 PDHXO00330 501 aa14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 PTPRAP18433 802 aa14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 PICALMQ13492 652 aa14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 MOGSQ13724 837 aa14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 HSP90AB4PQ58FF6 505 aa14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 CEP85Q6P2H3 762 aa14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 C17orf99Q6UX52 265 aa14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 PRRT2Q7Z6L0 340 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 DBNDD2Q9BQY9 259 aa14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 OSBPL5Q9H0X9 879 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 DHX36Q9H2U1 1008 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 LOC285556D6RIA3 1793 aa14.87□□□□□ -0.03
SQSTM1-207ENST00000481335 MKI67P46013 3256 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-207ENST00000481335 PPP4CP60510 307 aa14.86□□□□□ -0.03
SQSTM1-207ENST00000481335 NAA16Q6N069 864 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-207ENST00000481335 TBC1D9Q6ZT07 1266 aa14.86□□□□□ -0.03
SQSTM1-207ENST00000481335 CHMP4BQ9H444 224 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-207ENST00000481335 C1orf115Q9H7X2 142 aa14.86□□□□□ -0.03
SQSTM1-207ENST00000481335 AFG3L2Q9Y4W6 797 aa14.86□□□□□ -0.03
SQSTM1-207ENST00000481335 SIPA1L1O43166 1804 aa14.86□□□□□ -0.03
SQSTM1-207ENST00000481335 ZSWIM8A7E2V4 1837 aa14.85□□□□□ -0.03
SQSTM1-207ENST00000481335 HOXD10P28358 340 aa14.85□□□□□ -0.03
SQSTM1-207ENST00000481335 SLC9C1Q4G0N8 1177 aa14.85□□□□□ -0.03
SQSTM1-207ENST00000481335 TEX11Q8IYF3 940 aa14.85□□□□□ -0.03
SQSTM1-207ENST00000481335 ZNF333Q96JL9 665 aa14.85□□□□□ -0.03
SQSTM1-207ENST00000481335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.85□□□□□ -0.036e-7■□□□□ 10.6
SQSTM1-207ENST00000481335 DBNLQ9UJU6 430 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-207ENST00000481335 ZHX2Q9Y6X8 837 aa14.85□□□□□ -0.03
SQSTM1-207ENST00000481335 CYP2E1P05181 493 aaPredicted RBP14.84□□□□□ -0.03
SQSTM1-207ENST00000481335 CAP1Q01518 475 aa14.84□□□□□ -0.03
SQSTM1-207ENST00000481335 PRPF38BQ5VTL8 546 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-207ENST00000481335 PI4KBQ9UBF8 816 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms