RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 DCTPP1Q9H773 170 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 ELP3Q9H9T3 547 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 DDX4Q9NQI0 724 aaKnown RBP12.87□□□□□ -0.35
SP140-210ENST00000479539 ZNF112Q9UJU3 913 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 ARAP2Q8WZ64 1704 aa12.86□□□□□ -0.35
SP140-210ENST00000479539 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
SP140-210ENST00000479539 IFIT2P09913 472 aaKnown RBP12.86□□□□□ -0.35
SP140-210ENST00000479539 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
SP140-210ENST00000479539 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
SP140-210ENST00000479539 MIGA2Q7L4E1 593 aa12.86□□□□□ -0.35
SP140-210ENST00000479539 WRNIP1Q96S55 665 aa12.86□□□□□ -0.35
SP140-210ENST00000479539 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
SP140-210ENST00000479539 CSADQ9Y600 493 aa12.86□□□□□ -0.35
SP140-210ENST00000479539 ATRNL1Q5VV63 1379 aa12.85□□□□□ -0.35
SP140-210ENST00000479539 SPDYE5A6NIY4 337 aa12.85□□□□□ -0.35
SP140-210ENST00000479539 BAG3O95817 575 aa12.85□□□□□ -0.35
SP140-210ENST00000479539 TMED8Q6PL24 325 aaPredicted RBP12.85□□□□□ -0.35
SP140-210ENST00000479539 ZKSCAN4Q969J2 545 aaPredicted RBP12.85□□□□□ -0.35
SP140-210ENST00000479539 OPTNQ96CV9 577 aa12.85□□□□□ -0.35
SP140-210ENST00000479539 CFHR5Q9BXR6 569 aa12.85□□□□□ -0.35
SP140-210ENST00000479539 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
SP140-210ENST00000479539 ANTXR1Q9H6X2 564 aa12.85□□□□□ -0.35
SP140-210ENST00000479539 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.85□□□□□ -0.35
SP140-210ENST00000479539 SNCAIPQ9Y6H5 919 aa12.85□□□□□ -0.35
SP140-210ENST00000479539 DDTLA6NHG4 134 aaPredicted RBP12.84□□□□□ -0.35
SP140-210ENST00000479539 IDH1O75874 414 aaKnown RBP12.84□□□□□ -0.35
SP140-210ENST00000479539 ALDH1A1P00352 501 aa12.84□□□□□ -0.35
SP140-210ENST00000479539 INPP5BP32019 993 aa12.84□□□□□ -0.35
SP140-210ENST00000479539 PICALMQ13492 652 aa12.84□□□□□ -0.35
SP140-210ENST00000479539 ADGRA1Q86SQ6 560 aa12.84□□□□□ -0.35
SP140-210ENST00000479539 ERO1BQ86YB8 467 aa12.84□□□□□ -0.35
SP140-210ENST00000479539 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
SP140-210ENST00000479539 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
SP140-210ENST00000479539 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
SP140-210ENST00000479539 MS4A4AQ96JQ5 239 aa12.84□□□□□ -0.35
SP140-210ENST00000479539 NDUFB9Q9Y6M9 179 aa12.84□□□□□ -0.35
SP140-210ENST00000479539 PHF20L1A8MW92 1017 aa12.83□□□□□ -0.36
SP140-210ENST00000479539 IGF2BP3O00425 579 aaKnown RBP eCLIP12.83□□□□□ -0.36
SP140-210ENST00000479539 TBC1D12O60347 775 aa12.83□□□□□ -0.36
SP140-210ENST00000479539 TBC1D8O95759 1140 aa12.83□□□□□ -0.36
SP140-210ENST00000479539 PLCG2P16885 1265 aa12.83□□□□□ -0.36
SP140-210ENST00000479539 ATP5JP18859 108 aa12.83□□□□□ -0.36
SP140-210ENST00000479539 CYP7A1P22680 504 aa12.83□□□□□ -0.36
SP140-210ENST00000479539 MAP3K12Q12852 859 aa12.83□□□□□ -0.36
SP140-210ENST00000479539 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
SP140-210ENST00000479539 NOM1Q5C9Z4 860 aaKnown RBP12.83□□□□□ -0.36
SP140-210ENST00000479539 NOL9Q5SY16 702 aaKnown RBP12.83□□□□□ -0.36
SP140-210ENST00000479539 ZSCAN29Q8IWY8 852 aaPredicted RBP12.83□□□□□ -0.36
SP140-210ENST00000479539 CRBNQ96SW2 442 aa12.83□□□□□ -0.36
SP140-210ENST00000479539 PTPN18Q99952 460 aa12.83□□□□□ -0.36
SP140-210ENST00000479539 NOL10Q9BSC4 688 aaKnown RBP12.83□□□□□ -0.36
SP140-210ENST00000479539 OSBPL5Q9H0X9 879 aaPredicted RBP12.83□□□□□ -0.36
SP140-210ENST00000479539 AATFQ9NY61 560 aaKnown RBP eCLIP12.83□□□□□ -0.36
SP140-210ENST00000479539 SMARCA5O60264 1052 aaPredicted RBP12.82□□□□□ -0.36
SP140-210ENST00000479539 GTF2A2P52657 109 aa12.82□□□□□ -0.36
SP140-210ENST00000479539 PPATQ06203 517 aa12.82□□□□□ -0.36
SP140-210ENST00000479539 PPIL2Q13356 520 aa12.82□□□□□ -0.36
SP140-210ENST00000479539 OTUD7BQ6GQQ9 843 aa12.82□□□□□ -0.36
SP140-210ENST00000479539 BRI3BPQ8WY22 251 aa12.82□□□□□ -0.36
SP140-210ENST00000479539 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
SP140-210ENST00000479539 IRF6O14896 467 aa12.81□□□□□ -0.36
SP140-210ENST00000479539 DYNLL1P63167 89 aaKnown RBP12.81□□□□□ -0.36
SP140-210ENST00000479539 CERS3Q8IU89 383 aa12.81□□□□□ -0.36
SP140-210ENST00000479539 MAGEB6Q8N7X4 407 aa12.81□□□□□ -0.36
SP140-210ENST00000479539 BOLA2Q9H3K6 86 aa12.81□□□□□ -0.36
SP140-210ENST00000479539 R3HDMLQ9H3Y0 253 aa12.81□□□□□ -0.36
SP140-210ENST00000479539 ECM29Q5VYK3 1845 aa12.81□□□□□ -0.36
SP140-210ENST00000479539 GPR25O00155 361 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 GOLIM4O00461 696 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 CETPP11597 493 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 SNAPC2Q13487 334 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 AAMPQ13685 434 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 MAPKAPK5Q8IW41 473 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
SP140-210ENST00000479539 HAUS7Q99871 368 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 BCL11AQ9H165 835 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 DHX36Q9H2U1 1008 aaKnown RBP12.8□□□□□ -0.36
SP140-210ENST00000479539 PI4KBQ9UBF8 816 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 KCNH4Q9UQ05 1017 aa12.8□□□□□ -0.36
SP140-210ENST00000479539 COL2A1P02458 1487 aaPredicted RBP12.79□□□□□ -0.36
SP140-210ENST00000479539 CCL15-CCL14A0A0B4J2E2 113 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 CXCL11O14625 94 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 CTNND1O60716 968 aaKnown RBP12.79□□□□□ -0.36
SP140-210ENST00000479539 PDE6AP16499 860 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
SP140-210ENST00000479539 CCL15Q16663 113 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 SLC9C2Q5TAH2 1124 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 METTL16Q86W50 562 aaKnown RBP12.79□□□□□ -0.36
SP140-210ENST00000479539 SCYL3Q8IZE3 742 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 MIGA1Q8NAN2 632 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 ZNF296Q8WUU4 475 aaPredicted RBP12.79□□□□□ -0.36
SP140-210ENST00000479539 EDC3Q96F86 508 aaKnown RBP12.79□□□□□ -0.36
SP140-210ENST00000479539 RIOK1Q9BRS2 568 aaKnown RBP12.79□□□□□ -0.36
SP140-210ENST00000479539 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 PAG1Q9NWQ8 432 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 FLT1P17948 1338 aa12.79□□□□□ -0.36
SP140-210ENST00000479539 TCRBV5S4A2TA0A5A2 114 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms