RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ARHGAP39Q9C0H5 1083 aa21.44■■□□□ 1.02
ECHDC1-216ENST00000479525 TLR7Q9NYK1 1049 aaKnown RBP21.44■■□□□ 1.02
ECHDC1-216ENST00000479525 RAI14Q9P0K7 980 aa21.44■■□□□ 1.02
ECHDC1-216ENST00000479525 WDHD1O75717 1129 aaPredicted RBP21.43■■□□□ 1.02
ECHDC1-216ENST00000479525 HOOK2Q96ED9 719 aa21.43■■□□□ 1.02
ECHDC1-216ENST00000479525 ERO1AQ96HE7 468 aa21.43■■□□□ 1.02
ECHDC1-216ENST00000479525 ZFYVE28Q9HCC9 887 aa21.43■■□□□ 1.02
ECHDC1-216ENST00000479525 ATRNL1Q5VV63 1379 aa21.43■■□□□ 1.02
ECHDC1-216ENST00000479525 ZBTB7BO15156 539 aaPredicted RBP21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 ARID4AP29374 1257 aaPredicted RBP21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 SNAPC2Q13487 334 aa21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 TNNI3KQ59H18 835 aa21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 SPTY2D1Q68D10 685 aaPredicted RBP21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 SSH3Q8TE77 659 aa21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 BCL11AQ9H165 835 aa21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 EFCC1Q9HA90 598 aa21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 ZNF112Q9UJU3 913 aa21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 FPGT-TNNI3KV9GXZ4 949 aa21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 SIPA1L1O43166 1804 aa21.42■■□□□ 1.02
ECHDC1-216ENST00000479525 PDS5AQ29RF7 1337 aaKnown RBP21.41■■□□□ 1.02
ECHDC1-216ENST00000479525 BRCA2P51587 3418 aa21.41■■□□□ 1.02
ECHDC1-216ENST00000479525 CETPP11597 493 aa21.41■■□□□ 1.02
ECHDC1-216ENST00000479525 RHBDL3P58872 404 aa21.41■■□□□ 1.02
ECHDC1-216ENST00000479525 TTC39AQ5SRH9 613 aa21.41■■□□□ 1.02
ECHDC1-216ENST00000479525 NSUN4Q96CB9 384 aaKnown RBP21.41■■□□□ 1.02
ECHDC1-216ENST00000479525 IDI2Q9BXS1 227 aa21.41■■□□□ 1.02
ECHDC1-216ENST00000479525 CCDC8Q9H0W5 538 aaPredicted RBP21.41■■□□□ 1.02
ECHDC1-216ENST00000479525 NDUFB9Q9Y6M9 179 aa21.41■■□□□ 1.02
ECHDC1-216ENST00000479525 MYCP01106 439 aaPredicted RBP21.4■■□□□ 1.02
ECHDC1-216ENST00000479525 PTPN22Q9Y2R2 807 aa21.4■■□□□ 1.02
ECHDC1-216ENST00000479525 FOCADQ5VW36 1801 aa21.4■■□□□ 1.02
ECHDC1-216ENST00000479525 PHF20L1A8MW92 1017 aa21.39■■□□□ 1.02
ECHDC1-216ENST00000479525 PPATQ06203 517 aa21.39■■□□□ 1.02
ECHDC1-216ENST00000479525 LRP2BPQ9P2M1 347 aa21.39■■□□□ 1.02
ECHDC1-216ENST00000479525 CPA4Q9UI42 421 aa21.39■■□□□ 1.02
ECHDC1-216ENST00000479525 MGAMO43451 1857 aa21.39■■□□□ 1.01
ECHDC1-216ENST00000479525 GPR75-ASB3A0A0A6YYF3 556 aa21.38■■□□□ 1.01
ECHDC1-216ENST00000479525 POTEFA5A3E0 1075 aa21.38■■□□□ 1.01
ECHDC1-216ENST00000479525 ENTPD3O75355 529 aa21.38■■□□□ 1.01
ECHDC1-216ENST00000479525 SLF2Q8IX21 1173 aa21.38■■□□□ 1.01
ECHDC1-216ENST00000479525 EXOC6BQ9Y2D4 811 aa21.38■■□□□ 1.01
ECHDC1-216ENST00000479525 PTCH2Q9Y6C5 1203 aa21.38■■□□□ 1.01
ECHDC1-216ENST00000479525 ZAP70P43403 619 aa21.37■■□□□ 1.01
ECHDC1-216ENST00000479525 MOGSQ13724 837 aa21.37■■□□□ 1.01
ECHDC1-216ENST00000479525 CEP85Q6P2H3 762 aa21.37■■□□□ 1.01
ECHDC1-216ENST00000479525 SH3RF3Q8TEJ3 882 aaPredicted RBP21.37■■□□□ 1.01
ECHDC1-216ENST00000479525 FAM163AQ96GL9 167 aaPredicted RBP21.37■■□□□ 1.01
ECHDC1-216ENST00000479525 PDHXO00330 501 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 UQCRFS1P1P0C7P4 283 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 SLC4A8Q2Y0W8 1093 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 NOL9Q5SY16 702 aaKnown RBP21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 ADGRA1Q86SQ6 560 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 AATFQ9NY61 560 aaKnown RBP eCLIP21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 DBNLQ9UJU6 430 aaKnown RBP21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 ZHX2Q9Y6X8 837 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 APBB1O00213 710 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 ZBTB22O15209 634 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 TLR2O60603 784 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 CYP2E1P05181 493 aaPredicted RBP21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 CTGFP29279 349 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 TEX11Q8IYF3 940 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 SCYL3Q8IZE3 742 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 EAF2Q96CJ1 260 aaPredicted RBP21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 PIH1D3Q9NQM4 214 aaKnown RBP21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 KCNH4Q9UQ05 1017 aa21.36■■□□□ 1.01
ECHDC1-216ENST00000479525 RBBP6Q7Z6E9 1792 aaKnown RBP21.35■■□□□ 1.01
ECHDC1-216ENST00000479525 MKI67P46013 3256 aaKnown RBP21.35■■□□□ 1.01
ECHDC1-216ENST00000479525 MYH1P12882 1939 aa21.35■■□□□ 1.01
ECHDC1-216ENST00000479525 PDE4DIPQ5VU43 2346 aa21.35■■□□□ 1.01
ECHDC1-216ENST00000479525 CYP2C8P10632 490 aa21.35■■□□□ 1.01
ECHDC1-216ENST00000479525 CCDC158Q5M9N0 1113 aa21.35■■□□□ 1.01
ECHDC1-216ENST00000479525 GADL1Q6ZQY3 521 aa21.35■■□□□ 1.01
ECHDC1-216ENST00000479525 PTPRAP18433 802 aa21.34■■□□□ 1.01
ECHDC1-216ENST00000479525 GSTO1P78417 241 aa21.34■■□□□ 1.01
ECHDC1-216ENST00000479525 RRP1BQ14684 758 aaKnown RBP21.34■■□□□ 1.01
ECHDC1-216ENST00000479525 NAA16Q6N069 864 aaPredicted RBP21.34■■□□□ 1.01
ECHDC1-216ENST00000479525 GPAT2Q6NUI2 795 aa21.34■■□□□ 1.01
ECHDC1-216ENST00000479525 PICK1Q9NRD5 415 aa21.34■■□□□ 1.01
ECHDC1-216ENST00000479525 COG6Q9Y2V7 657 aa21.34■■□□□ 1.01
ECHDC1-216ENST00000479525 TRIM75PA6NK02 468 aa21.33■■□□□ 1
ECHDC1-216ENST00000479525 LDHCP07864 332 aa21.33■■□□□ 1
ECHDC1-216ENST00000479525 DYNLL1P63167 89 aaKnown RBP21.33■■□□□ 1
ECHDC1-216ENST00000479525 MAPKAPK5Q8IW41 473 aa21.33■■□□□ 1
ECHDC1-216ENST00000479525 OSBPL5Q9H0X9 879 aaPredicted RBP21.33■■□□□ 1
ECHDC1-216ENST00000479525 IL1RAPL2Q9NP60 686 aa21.33■■□□□ 1
ECHDC1-216ENST00000479525 GPR108Q9NPR9 543 aa21.33■■□□□ 1
ECHDC1-216ENST00000479525 NOP58Q9Y2X3 529 aaKnown RBP21.33■■□□□ 1
ECHDC1-216ENST00000479525 KIAA0100Q14667 2235 aaKnown RBP21.32■■□□□ 1
ECHDC1-216ENST00000479525 LACTBP83111 547 aaPredicted RBP21.32■■□□□ 1
ECHDC1-216ENST00000479525 SHROOM1Q2M3G4 852 aaPredicted RBP21.32■■□□□ 1
ECHDC1-216ENST00000479525 ANKRD23Q86SG2 305 aa21.32■■□□□ 1
ECHDC1-216ENST00000479525 SH3TC2Q8TF17 1288 aa21.32■■□□□ 1
ECHDC1-216ENST00000479525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.32■■□□□ 1
ECHDC1-216ENST00000479525 C17orf99Q6UX52 265 aa21.31■■□□□ 1
ECHDC1-216ENST00000479525 TGFBRAP1Q8WUH2 860 aa21.31■■□□□ 1
ECHDC1-216ENST00000479525 ANTXR1Q9H6X2 564 aa21.31■■□□□ 1
ECHDC1-216ENST00000479525 ADGRA2Q96PE1 1338 aa21.31■■□□□ 1
ECHDC1-216ENST00000479525 EN2P19622 333 aaPredicted RBP21.3■■□□□ 1
ECHDC1-216ENST00000479525 AACSQ86V21 672 aa21.3■■□□□ 1
ECHDC1-216ENST00000479525 NOL10Q9BSC4 688 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms