RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 RPS8P62241 208 aaKnown RBP16.27■□□□□ 0.2
COL20A1-206ENST00000479501 TNIP1Q15025 636 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 ZNF174Q15697 407 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 CCDC40Q4G0X9 1142 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 FAM107BQ9H098 131 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 VWA3AA6NCI4 1184 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 MCM3P25205 808 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 PHKA1P46020 1223 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 AATFQ9NY61 560 aaKnown RBP eCLIP16.27■□□□□ 0.2
COL20A1-206ENST00000479501 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.27■□□□□ 0.2
COL20A1-206ENST00000479501 V9GYY5 206 aaPredicted RBP16.27■□□□□ 0.2
COL20A1-206ENST00000479501 IBSPP21815 317 aaPredicted RBP16.27■□□□□ 0.2
COL20A1-206ENST00000479501 PDIA3P30101 505 aaKnown RBP16.27■□□□□ 0.2
COL20A1-206ENST00000479501 IL6STP40189 918 aaPredicted RBP16.27■□□□□ 0.2
COL20A1-206ENST00000479501 IFNL3Q8IZI9 196 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 TAF4BQ92750 862 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.2
COL20A1-206ENST00000479501 GNA11P29992 359 aa16.27■□□□□ 0.19
COL20A1-206ENST00000479501 SCRN1Q12765 414 aa16.27■□□□□ 0.19
COL20A1-206ENST00000479501 TMEM132AQ24JP5 1023 aa16.27■□□□□ 0.19
COL20A1-206ENST00000479501 DTHD1Q6ZMT9 781 aa16.27■□□□□ 0.19
COL20A1-206ENST00000479501 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.19
COL20A1-206ENST00000479501 H7C1W4 665 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 NEFHP12036 1026 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 TRIM21P19474 475 aaKnown RBP16.26■□□□□ 0.19
COL20A1-206ENST00000479501 ASIC1P78348 528 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 ENOX2Q16206 610 aaKnown RBP16.26■□□□□ 0.19
COL20A1-206ENST00000479501 SMAP1Q8IYB5 467 aaPredicted RBP16.26■□□□□ 0.19
COL20A1-206ENST00000479501 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 NR1I2O75469 434 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 ZNF75DP51815 510 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 SIK1P57059 783 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 UBE3CQ15386 1083 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 TEX11Q8IYF3 940 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 WDR66Q8TBY9 1149 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 IPO4Q8TEX9 1081 aaKnown RBP16.26■□□□□ 0.19
COL20A1-206ENST00000479501 MAST3O60307 1309 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 BCAMP50895 628 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 ARFGAP3Q9NP61 516 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 ADAMTS13Q76LX8 1427 aa16.26■□□□□ 0.19
COL20A1-206ENST00000479501 KCNJ14Q9UNX9 436 aa16.25■□□□□ 0.19
COL20A1-206ENST00000479501 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
COL20A1-206ENST00000479501 POTEB2H3BUK9 544 aa16.25■□□□□ 0.19
COL20A1-206ENST00000479501 RIMBP2O15034 1052 aa16.25■□□□□ 0.19
COL20A1-206ENST00000479501 POLR2DO15514 142 aaKnown RBP16.25■□□□□ 0.19
COL20A1-206ENST00000479501 UFL1O94874 794 aa16.25■□□□□ 0.19
COL20A1-206ENST00000479501 BRINP3Q76B58 766 aa16.25■□□□□ 0.19
COL20A1-206ENST00000479501 LARGE1O95461 756 aa16.25■□□□□ 0.19
COL20A1-206ENST00000479501 SPECC1Q5M775 1068 aa16.25■□□□□ 0.19
COL20A1-206ENST00000479501 SLU7O95391 586 aaKnown RBP16.24■□□□□ 0.19
COL20A1-206ENST00000479501 GPATCH11Q8N954 259 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 GYG1P46976 350 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 KIF2CQ99661 725 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 FEZ1Q99689 392 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 TUBB4AP04350 444 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 VPS36Q86VN1 386 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 NLRP10Q86W26 655 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 PIGBQ92521 554 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 PTPRUQ92729 1446 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 ZFP91Q96JP5 570 aaPredicted RBP16.24■□□□□ 0.19
COL20A1-206ENST00000479501 PPARAQ07869 468 aa16.24■□□□□ 0.19
COL20A1-206ENST00000479501 SAP30BPQ9UHR5 308 aaKnown RBP16.24■□□□□ 0.19
COL20A1-206ENST00000479501 TCERG1LQ5VWI1 586 aa16.23■□□□□ 0.19
COL20A1-206ENST00000479501 ZNF654Q8IZM8 581 aa16.23■□□□□ 0.19
COL20A1-206ENST00000479501 FBXO18Q8NFZ0 1043 aa16.23■□□□□ 0.19
COL20A1-206ENST00000479501 NEURL4Q96JN8 1562 aa16.23■□□□□ 0.19
COL20A1-206ENST00000479501 USP17L12C9JPN9 530 aa16.23■□□□□ 0.19
COL20A1-206ENST00000479501 USP17L21D6R901 530 aa16.23■□□□□ 0.19
COL20A1-206ENST00000479501 TNNI2P48788 182 aa16.23■□□□□ 0.19
COL20A1-206ENST00000479501 EHMT1Q9H9B1 1298 aa16.23■□□□□ 0.19
COL20A1-206ENST00000479501 PARP1P09874 1014 aaKnown RBP16.22■□□□□ 0.19
COL20A1-206ENST00000479501 CRKLP46109 303 aaKnown RBP16.22■□□□□ 0.19
COL20A1-206ENST00000479501 PIK3AP1Q6ZUJ8 805 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 OSBP2Q969R2 916 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 AKR1B10O60218 316 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 PAFAH1B1P43034 410 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 PI16Q6UXB8 463 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 C17orf53Q8N3J3 647 aaPredicted RBP16.22■□□□□ 0.19
COL20A1-206ENST00000479501 RBM17Q96I25 401 aaKnown RBP16.22■□□□□ 0.19
COL20A1-206ENST00000479501 NLRP12P59046 1061 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 CHRNDQ07001 517 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 RNF187Q5TA31 235 aaPredicted RBP16.22■□□□□ 0.19
COL20A1-206ENST00000479501 KRT79Q5XKE5 535 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 NSUN7Q8NE18 718 aaKnown RBP16.22■□□□□ 0.19
COL20A1-206ENST00000479501 hCG_1642624A0A1W2PR95 340 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 CCDC175P0C221 793 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 MCM6Q14566 821 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 NRKQ7Z2Y5 1582 aa16.22■□□□□ 0.19
COL20A1-206ENST00000479501 FANCCQ00597 558 aa16.21■□□□□ 0.19
COL20A1-206ENST00000479501 ERMNQ8TAM6 284 aa16.21■□□□□ 0.19
COL20A1-206ENST00000479501 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.19
COL20A1-206ENST00000479501 PLIN2Q99541 437 aa16.21■□□□□ 0.19
COL20A1-206ENST00000479501 GGA1Q9UJY5 639 aa16.21■□□□□ 0.19
COL20A1-206ENST00000479501 TTC38Q5R3I4 469 aa16.21■□□□□ 0.19
COL20A1-206ENST00000479501 KIAA1468Q9P260 1216 aa16.21■□□□□ 0.19
COL20A1-206ENST00000479501 MNAT1P51948 309 aa16.21■□□□□ 0.19
COL20A1-206ENST00000479501 CTR9Q6PD62 1173 aa16.21■□□□□ 0.19
COL20A1-206ENST00000479501 OGFRQ9NZT2 677 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms