RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 FCGRTP55899 365 aa17.65■□□□□ 0.42
C9orf85-205ENST00000479413 MOGSQ13724 837 aa17.65■□□□□ 0.42
C9orf85-205ENST00000479413 MVPQ14764 893 aaKnown RBP17.65■□□□□ 0.42
C9orf85-205ENST00000479413 ZHX2Q9Y6X8 837 aa17.65■□□□□ 0.42
C9orf85-205ENST00000479413 RFX7Q2KHR2 1363 aa17.65■□□□□ 0.42
C9orf85-205ENST00000479413 ATRNL1Q5VV63 1379 aa17.65■□□□□ 0.42
C9orf85-205ENST00000479413 A0A1B0GUL7 405 aa17.64■□□□□ 0.41
C9orf85-205ENST00000479413 PHF20L1A8MW92 1017 aa17.64■□□□□ 0.41
C9orf85-205ENST00000479413 SRGAP3O43295 1099 aa17.64■□□□□ 0.41
C9orf85-205ENST00000479413 CYP2C8P10632 490 aa17.64■□□□□ 0.41
C9orf85-205ENST00000479413 CTGFP29279 349 aa17.64■□□□□ 0.41
C9orf85-205ENST00000479413 GRK4P32298 578 aa17.64■□□□□ 0.41
C9orf85-205ENST00000479413 TIMM10P62072 90 aa17.64■□□□□ 0.41
C9orf85-205ENST00000479413 NKX2-3Q8TAU0 364 aa17.64■□□□□ 0.41
C9orf85-205ENST00000479413 A0A0G2JLL6 359 aaPredicted RBP17.63■□□□□ 0.41
C9orf85-205ENST00000479413 PTPRAP18433 802 aa17.63■□□□□ 0.41
C9orf85-205ENST00000479413 BTDP43251 543 aa17.63■□□□□ 0.41
C9orf85-205ENST00000479413 PICALMQ13492 652 aa17.63■□□□□ 0.41
C9orf85-205ENST00000479413 GPAT2Q6NUI2 795 aa17.63■□□□□ 0.41
C9orf85-205ENST00000479413 PRRT2Q7Z6L0 340 aaPredicted RBP17.63■□□□□ 0.41
C9orf85-205ENST00000479413 ARHGAP45Q92619 1136 aa17.63■□□□□ 0.41
C9orf85-205ENST00000479413 FAM163AQ96GL9 167 aaPredicted RBP17.63■□□□□ 0.41
C9orf85-205ENST00000479413 XAGE2Q96GT9 111 aa17.63■□□□□ 0.41
C9orf85-205ENST00000479413 BIN2Q9UBW5 565 aaPredicted RBP17.63■□□□□ 0.41
C9orf85-205ENST00000479413 MROH7-TTC4A0A0A0MT08 1334 aa17.63■□□□□ 0.41
C9orf85-205ENST00000479413 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
C9orf85-205ENST00000479413 BCRP11274 1271 aa17.62■□□□□ 0.41
C9orf85-205ENST00000479413 MTFR1Q15390 333 aa17.62■□□□□ 0.41
C9orf85-205ENST00000479413 GADL1Q6ZQY3 521 aa17.62■□□□□ 0.41
C9orf85-205ENST00000479413 ERICH6Q7L0X2 663 aa17.62■□□□□ 0.41
C9orf85-205ENST00000479413 SLC45A1Q9Y2W3 748 aa17.62■□□□□ 0.41
C9orf85-205ENST00000479413 AFG3L2Q9Y4W6 797 aa17.62■□□□□ 0.41
C9orf85-205ENST00000479413 DOCK1Q14185 1865 aa17.62■□□□□ 0.41
C9orf85-205ENST00000479413 RARSP54136 660 aaKnown RBP17.61■□□□□ 0.41
C9orf85-205ENST00000479413 UBXN2AP68543 259 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 MAP3K10Q02779 954 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 PRKCZQ05513 592 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 TFCP2Q12800 502 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 MTX1Q13505 466 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 GORABQ5T7V8 394 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 SH3BP5LQ7L8J4 393 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 SLAIN1Q8ND83 568 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 SMCR8Q8TEV9 937 aaPredicted RBP17.61■□□□□ 0.41
C9orf85-205ENST00000479413 NEUROD6Q96NK8 337 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 MGAMO43451 1857 aa17.61■□□□□ 0.41
C9orf85-205ENST00000479413 DDTLA6NHG4 134 aaPredicted RBP17.6■□□□□ 0.41
C9orf85-205ENST00000479413 TRIM75PA6NK02 468 aa17.6■□□□□ 0.41
C9orf85-205ENST00000479413 CCL5P13501 91 aa17.6■□□□□ 0.41
C9orf85-205ENST00000479413 GSTO1P78417 241 aa17.6■□□□□ 0.41
C9orf85-205ENST00000479413 MECOMQ03112 1051 aa17.6■□□□□ 0.41
C9orf85-205ENST00000479413 RNF208Q9H0X6 261 aa17.6■□□□□ 0.41
C9orf85-205ENST00000479413 CEP290O15078 2479 aa17.59■□□□□ 0.41
C9orf85-205ENST00000479413 GPR75-ASB3A0A0A6YYF3 556 aa17.59■□□□□ 0.41
C9orf85-205ENST00000479413 H0YGN5 161 aa17.59■□□□□ 0.41
C9orf85-205ENST00000479413 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
C9orf85-205ENST00000479413 LDHCP07864 332 aa17.59■□□□□ 0.41
C9orf85-205ENST00000479413 GJB1P08034 283 aa17.59■□□□□ 0.41
C9orf85-205ENST00000479413 GJA8P48165 433 aa17.59■□□□□ 0.41
C9orf85-205ENST00000479413 SHISA4Q96DD7 197 aa17.59■□□□□ 0.41
C9orf85-205ENST00000479413 DDX4Q9NQI0 724 aaKnown RBP17.59■□□□□ 0.41
C9orf85-205ENST00000479413 COLQQ9Y215 455 aaPredicted RBP17.59■□□□□ 0.41
C9orf85-205ENST00000479413 PTPRFP10586 1907 aa17.59■□□□□ 0.41
C9orf85-205ENST00000479413 TNPO2O14787 897 aaKnown RBP17.58■□□□□ 0.4
C9orf85-205ENST00000479413 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
C9orf85-205ENST00000479413 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
C9orf85-205ENST00000479413 FXR1P51114 621 aaKnown RBP eCLIP17.58■□□□□ 0.4
C9orf85-205ENST00000479413 SPATA5Q8NB90 893 aa17.58■□□□□ 0.4
C9orf85-205ENST00000479413 DPF3Q92784 378 aa17.58■□□□□ 0.4
C9orf85-205ENST00000479413 PNMA3Q9UL41 463 aa17.58■□□□□ 0.4
C9orf85-205ENST00000479413 TBC1D12O60347 775 aa17.57■□□□□ 0.4
C9orf85-205ENST00000479413 GNAI2P04899 355 aa17.57■□□□□ 0.4
C9orf85-205ENST00000479413 RHBDL3P58872 404 aa17.57■□□□□ 0.4
C9orf85-205ENST00000479413 HTATIP2Q9BUP3 242 aa17.57■□□□□ 0.4
C9orf85-205ENST00000479413 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.57■□□□□ 0.4
C9orf85-205ENST00000479413 RAI14Q9P0K7 980 aa17.57■□□□□ 0.4
C9orf85-205ENST00000479413 HMG20BQ9P0W2 317 aa17.57■□□□□ 0.4
C9orf85-205ENST00000479413 AGTPBP1Q9UPW5 1226 aa17.57■□□□□ 0.4
C9orf85-205ENST00000479413 PHIPQ8WWQ0 1821 aa17.56■□□□□ 0.4
C9orf85-205ENST00000479413 ADCY3O60266 1144 aa17.56■□□□□ 0.4
C9orf85-205ENST00000479413 FLT3LGP49771 235 aa17.56■□□□□ 0.4
C9orf85-205ENST00000479413 NOL10Q9BSC4 688 aaKnown RBP17.56■□□□□ 0.4
C9orf85-205ENST00000479413 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
C9orf85-205ENST00000479413 GABRQQ9UN88 632 aa17.56■□□□□ 0.4
C9orf85-205ENST00000479413 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
C9orf85-205ENST00000479413 SLURP2P0DP57 97 aa17.55■□□□□ 0.4
C9orf85-205ENST00000479413 ARID4AP29374 1257 aaPredicted RBP17.55■□□□□ 0.4
C9orf85-205ENST00000479413 G3BP1Q13283 466 aaKnown RBP eCLIP17.55■□□□□ 0.4
C9orf85-205ENST00000479413 PI16Q6UXB8 463 aa17.55■□□□□ 0.4
C9orf85-205ENST00000479413 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
C9orf85-205ENST00000479413 PROCA1Q8NCQ7 364 aaPredicted RBP17.55■□□□□ 0.4
C9orf85-205ENST00000479413 U2AF1L4Q8WU68 220 aaKnown RBP17.55■□□□□ 0.4
C9orf85-205ENST00000479413 NSUN4Q96CB9 384 aaKnown RBP17.55■□□□□ 0.4
C9orf85-205ENST00000479413 TBC1D2Q9BYX2 928 aa17.55■□□□□ 0.4
C9orf85-205ENST00000479413 FAM196BA6NMK8 535 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 FARP2O94887 1054 aaPredicted RBP17.54■□□□□ 0.4
C9orf85-205ENST00000479413 UQCRFS1P1P0C7P4 283 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 TRIM27P14373 513 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 PABPC4Q13310 644 aaKnown RBP eCLIP17.54■□□□□ 0.4
C9orf85-205ENST00000479413 IRF5Q13568 498 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms