RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
COL16A1-211ENST00000479100 TMED8Q6PL24 325 aaPredicted RBP18.37■□□□□ 0.53
COL16A1-211ENST00000479100 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
COL16A1-211ENST00000479100 EVI5LQ96CN4 794 aa18.37■□□□□ 0.53
COL16A1-211ENST00000479100 MAGEB6P1A0A0J9YX57 407 aa18.36■□□□□ 0.53
COL16A1-211ENST00000479100 TCRBV5S4A2TA0A5A2 114 aa18.36■□□□□ 0.53
COL16A1-211ENST00000479100 RNF113AO15541 343 aaKnown RBP18.36■□□□□ 0.53
COL16A1-211ENST00000479100 SLC10A3P09131 477 aa18.36■□□□□ 0.53
COL16A1-211ENST00000479100 ZNF157P51786 506 aaPredicted RBP18.36■□□□□ 0.53
COL16A1-211ENST00000479100 RHBDL3P58872 404 aa18.36■□□□□ 0.53
COL16A1-211ENST00000479100 PPP4CP60510 307 aa18.36■□□□□ 0.53
COL16A1-211ENST00000479100 FKBP1BP68106 108 aa18.36■□□□□ 0.53
COL16A1-211ENST00000479100 DOCK2Q92608 1830 aa18.36■□□□□ 0.53
COL16A1-211ENST00000479100 TMEM39BQ9GZU3 492 aa18.36■□□□□ 0.53
COL16A1-211ENST00000479100 PPP2R3BQ9Y5P8 575 aa18.36■□□□□ 0.53
COL16A1-211ENST00000479100 ECM29Q5VYK3 1845 aa18.35■□□□□ 0.53
COL16A1-211ENST00000479100 NF2P35240 595 aa18.35■□□□□ 0.53
COL16A1-211ENST00000479100 RGS3P49796 1198 aa18.35■□□□□ 0.53
COL16A1-211ENST00000479100 KIF23Q02241 960 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-211ENST00000479100 UBE3CQ15386 1083 aa18.35■□□□□ 0.53
COL16A1-211ENST00000479100 FKBP1CQ5VVH2 108 aa18.35■□□□□ 0.53
COL16A1-211ENST00000479100 ABHD8Q96I13 439 aa18.35■□□□□ 0.53
COL16A1-211ENST00000479100 ZFYP08048 801 aaPredicted RBP18.34■□□□□ 0.53
COL16A1-211ENST00000479100 TTC22Q5TAA0 569 aa18.34■□□□□ 0.53
COL16A1-211ENST00000479100 FAM83AQ86UY5 434 aa18.34■□□□□ 0.53
COL16A1-211ENST00000479100 ZSCAN29Q8IWY8 852 aaPredicted RBP18.34■□□□□ 0.53
COL16A1-211ENST00000479100 FAM151AQ8WW52 585 aa18.34■□□□□ 0.53
COL16A1-211ENST00000479100 IDI2Q9BXS1 227 aa18.34■□□□□ 0.53
COL16A1-211ENST00000479100 FAM198AQ9UFP1 575 aa18.34■□□□□ 0.53
COL16A1-211ENST00000479100 WDHD1O75717 1129 aaPredicted RBP18.33■□□□□ 0.52
COL16A1-211ENST00000479100 MBD4O95243 580 aa18.33■□□□□ 0.52
COL16A1-211ENST00000479100 USP5P45974 858 aa18.33■□□□□ 0.52
COL16A1-211ENST00000479100 PRKG1Q13976 671 aa18.33■□□□□ 0.52
COL16A1-211ENST00000479100 TTLL12Q14166 644 aaPredicted RBP18.33■□□□□ 0.52
COL16A1-211ENST00000479100 NBPF12Q5TAG4 269 aaPredicted RBP18.33■□□□□ 0.52
COL16A1-211ENST00000479100 MOB2Q70IA6 237 aa18.33■□□□□ 0.52
COL16A1-211ENST00000479100 CERS3Q8IU89 383 aa18.33■□□□□ 0.52
COL16A1-211ENST00000479100 MAPKAPK5Q8IW41 473 aa18.33■□□□□ 0.52
COL16A1-211ENST00000479100 ZFPM1Q8IX07 1006 aa18.33■□□□□ 0.52
COL16A1-211ENST00000479100 TGFBRAP1Q8WUH2 860 aa18.33■□□□□ 0.52
COL16A1-211ENST00000479100 ARMT1Q9H993 441 aa18.33■□□□□ 0.52
COL16A1-211ENST00000479100 DDX4Q9NQI0 724 aaKnown RBP18.33■□□□□ 0.52
COL16A1-211ENST00000479100 ENTPD3O75355 529 aa18.32■□□□□ 0.52
COL16A1-211ENST00000479100 SUPT20HL1Q3ZLR7 823 aa18.32■□□□□ 0.52
COL16A1-211ENST00000479100 RASAL3Q86YV0 1011 aa18.32■□□□□ 0.52
COL16A1-211ENST00000479100 CDAN1Q8IWY9 1227 aa18.32■□□□□ 0.52
COL16A1-211ENST00000479100 LCORLQ8N3X6 602 aa18.32■□□□□ 0.52
COL16A1-211ENST00000479100 CSRNP1Q96S65 589 aa18.32■□□□□ 0.52
COL16A1-211ENST00000479100 APPBP2Q92624 585 aa18.31■□□□□ 0.52
COL16A1-211ENST00000479100 RIOK1Q9BRS2 568 aaKnown RBP18.31■□□□□ 0.52
COL16A1-211ENST00000479100 CRNKL1Q9BZJ0 848 aaKnown RBP18.31■□□□□ 0.52
COL16A1-211ENST00000479100 PUS7LQ9H0K6 701 aaKnown RBP18.31■□□□□ 0.52
COL16A1-211ENST00000479100 SAGE1Q9NXZ1 904 aa18.31■□□□□ 0.52
COL16A1-211ENST00000479100 GSPT1P15170 499 aaKnown RBP18.3■□□□□ 0.52
COL16A1-211ENST00000479100 OSBP2Q969R2 916 aa18.3■□□□□ 0.52
COL16A1-211ENST00000479100 TEPSINQ96N21 525 aa18.3■□□□□ 0.52
COL16A1-211ENST00000479100 RNF186Q9NXI6 227 aa18.3■□□□□ 0.52
COL16A1-211ENST00000479100 SAP30BPQ9UHR5 308 aaKnown RBP18.3■□□□□ 0.52
COL16A1-211ENST00000479100 MYH7P12883 1935 aa18.29■□□□□ 0.52
COL16A1-211ENST00000479100 UBE2Q2LH0YL09 131 aa18.29■□□□□ 0.52
COL16A1-211ENST00000479100 M0R2C6 588 aa18.29■□□□□ 0.52
COL16A1-211ENST00000479100 SDSP20132 328 aa18.29■□□□□ 0.52
COL16A1-211ENST00000479100 ZMYM1Q5SVZ6 1142 aa18.29■□□□□ 0.52
COL16A1-211ENST00000479100 SEC62Q99442 399 aaKnown RBP18.29■□□□□ 0.52
COL16A1-211ENST00000479100 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
COL16A1-211ENST00000479100 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
COL16A1-211ENST00000479100 FZD1Q9UP38 647 aa18.29■□□□□ 0.52
COL16A1-211ENST00000479100 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
COL16A1-211ENST00000479100 FLT1P17948 1338 aa18.28■□□□□ 0.52
COL16A1-211ENST00000479100 PRKAB2O43741 272 aa18.28■□□□□ 0.52
COL16A1-211ENST00000479100 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
COL16A1-211ENST00000479100 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
COL16A1-211ENST00000479100 SLC4A8Q2Y0W8 1093 aa18.28■□□□□ 0.52
COL16A1-211ENST00000479100 HOOK2Q96ED9 719 aa18.28■□□□□ 0.52
COL16A1-211ENST00000479100 ANGEL1Q9UNK9 670 aaKnown RBP18.28■□□□□ 0.52
COL16A1-211ENST00000479100 SLC4A4Q9Y6R1 1079 aa18.28■□□□□ 0.52
COL16A1-211ENST00000479100 PAPPA2Q9BXP8 1791 aa18.27■□□□□ 0.52
COL16A1-211ENST00000479100 DDTLA6NHG4 134 aaPredicted RBP18.27■□□□□ 0.52
COL16A1-211ENST00000479100 GPAA1O43292 621 aa18.27■□□□□ 0.52
COL16A1-211ENST00000479100 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.52
COL16A1-211ENST00000479100 MIGA2Q7L4E1 593 aa18.27■□□□□ 0.52
COL16A1-211ENST00000479100 SH3BP5LQ7L8J4 393 aa18.27■□□□□ 0.52
COL16A1-211ENST00000479100 ARMC9Q7Z3E5 817 aa18.27■□□□□ 0.52
COL16A1-211ENST00000479100 REM2Q8IYK8 340 aaPredicted RBP18.27■□□□□ 0.52
COL16A1-211ENST00000479100 SDR42E1Q8WUS8 393 aa18.27■□□□□ 0.52
COL16A1-211ENST00000479100 FAM227BQ96M60 508 aa18.27■□□□□ 0.52
COL16A1-211ENST00000479100 MCOLN1Q9GZU1 580 aa18.27■□□□□ 0.52
COL16A1-211ENST00000479100 DIAPH3Q9NSV4 1193 aa18.27■□□□□ 0.52
COL16A1-211ENST00000479100 AK9Q5TCS8 1911 aa18.26■□□□□ 0.51
COL16A1-211ENST00000479100 TRPA1O75762 1119 aa18.26■□□□□ 0.51
COL16A1-211ENST00000479100 LDLRAD1Q5T700 205 aa18.26■□□□□ 0.51
COL16A1-211ENST00000479100 DCAF15Q66K64 600 aa18.26■□□□□ 0.51
COL16A1-211ENST00000479100 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
COL16A1-211ENST00000479100 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
COL16A1-211ENST00000479100 PALD1Q9ULE6 856 aa18.26■□□□□ 0.51
COL16A1-211ENST00000479100 RPAP1Q9BWH6 1393 aaPredicted RBP18.26■□□□□ 0.51
COL16A1-211ENST00000479100 SSC5DA1L4H1 1573 aa18.25■□□□□ 0.51
COL16A1-211ENST00000479100 HIP1O00291 1037 aa18.25■□□□□ 0.51
COL16A1-211ENST00000479100 TICAM2Q86XR7 235 aa18.25■□□□□ 0.51
COL16A1-211ENST00000479100 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms