RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 OGFOD1Q8N543 542 aa15.67■□□□□ 0.1
CHD3-210ENST00000479080 IDI2Q9BXS1 227 aa15.67■□□□□ 0.1
CHD3-210ENST00000479080 C22orf23Q9BZE7 217 aa15.67■□□□□ 0.1
CHD3-210ENST00000479080 SNX14Q9Y5W7 946 aa15.67■□□□□ 0.1
CHD3-210ENST00000479080 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
CHD3-210ENST00000479080 SLURP2P0DP57 97 aa15.66■□□□□ 0.1
CHD3-210ENST00000479080 MMP14P50281 582 aa15.66■□□□□ 0.1
CHD3-210ENST00000479080 IFFO2Q5TF58 517 aa15.66■□□□□ 0.1
CHD3-210ENST00000479080 CTR9Q6PD62 1173 aa15.66■□□□□ 0.1
CHD3-210ENST00000479080 KIAA1211Q6ZU35 1233 aa15.66■□□□□ 0.1
CHD3-210ENST00000479080 CDAN1Q8IWY9 1227 aa15.66■□□□□ 0.1
CHD3-210ENST00000479080 ATP8A2Q9NTI2 1148 aa15.66■□□□□ 0.1
CHD3-210ENST00000479080 PGAP2Q9UHJ9 254 aa15.66■□□□□ 0.1
CHD3-210ENST00000479080 SCAF8Q9UPN6 1271 aaKnown RBP15.66■□□□□ 0.1
CHD3-210ENST00000479080 LAMB1P07942 1786 aa15.66■□□□□ 0.1
CHD3-210ENST00000479080 BAZ2AQ9UIF9 1905 aaKnown RBP15.65■□□□□ 0.1
CHD3-210ENST00000479080 PLCG2P16885 1265 aa15.65■□□□□ 0.1
CHD3-210ENST00000479080 HAND2P61296 217 aa15.65■□□□□ 0.1
CHD3-210ENST00000479080 PICALMQ13492 652 aa15.65■□□□□ 0.1
CHD3-210ENST00000479080 GIMAP6Q6P9H5 292 aa15.65■□□□□ 0.1
CHD3-210ENST00000479080 CERS3Q8IU89 383 aa15.65■□□□□ 0.1
CHD3-210ENST00000479080 NOL10Q9BSC4 688 aaKnown RBP15.65■□□□□ 0.1
CHD3-210ENST00000479080 OSBPL5Q9H0X9 879 aaPredicted RBP15.65■□□□□ 0.1
CHD3-210ENST00000479080 SAP30BPQ9UHR5 308 aaKnown RBP15.65■□□□□ 0.1
CHD3-210ENST00000479080 USP17L12C9JPN9 530 aa15.64■□□□□ 0.09
CHD3-210ENST00000479080 USP17L21D6R901 530 aa15.64■□□□□ 0.09
CHD3-210ENST00000479080 APPP05067 770 aa15.64■□□□□ 0.09
CHD3-210ENST00000479080 USP5P45974 858 aa15.64■□□□□ 0.09
CHD3-210ENST00000479080 SLC4A8Q2Y0W8 1093 aa15.64■□□□□ 0.09
CHD3-210ENST00000479080 ADCK5Q3MIX3 580 aa15.64■□□□□ 0.09
CHD3-210ENST00000479080 SBK1Q52WX2 424 aa15.64■□□□□ 0.09
CHD3-210ENST00000479080 NAPBQ9H115 298 aa15.64■□□□□ 0.09
CHD3-210ENST00000479080 INCENPQ9NQS7 918 aa15.64■□□□□ 0.09
CHD3-210ENST00000479080 COL2A1P02458 1487 aaPredicted RBP15.64■□□□□ 0.09
CHD3-210ENST00000479080 ATRNL1Q5VV63 1379 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 ROBO3Q96MS0 1386 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 DDTLA6NHG4 134 aaPredicted RBP15.63■□□□□ 0.09
CHD3-210ENST00000479080 TCP10L2B9ZVM9 353 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 H7C1D1 291 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
CHD3-210ENST00000479080 TDO2P48775 406 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 PLCD1P51178 756 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 CTDSPL2Q05D32 466 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 C12orf60Q5U649 245 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 DPY19L2Q6NUT2 758 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 TAF1DQ9H5J8 278 aaPredicted RBP15.63■□□□□ 0.09
CHD3-210ENST00000479080 ADARB2Q9NS39 739 aaKnown RBP15.63■□□□□ 0.09
CHD3-210ENST00000479080 HACL1Q9UJ83 578 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 ANAPC4Q9UJX5 808 aa15.63■□□□□ 0.09
CHD3-210ENST00000479080 YY1P25490 414 aa15.62■□□□□ 0.09
CHD3-210ENST00000479080 PPARAQ07869 468 aa15.62■□□□□ 0.09
CHD3-210ENST00000479080 TCP10Q12799 353 aa15.62■□□□□ 0.09
CHD3-210ENST00000479080 TSGA10IPQ3SY00 556 aa15.62■□□□□ 0.09
CHD3-210ENST00000479080 DNAJC18Q9H819 358 aa15.62■□□□□ 0.09
CHD3-210ENST00000479080 MCM9Q9NXL9 1143 aa15.62■□□□□ 0.09
CHD3-210ENST00000479080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.62■□□□□ 0.09
CHD3-210ENST00000479080 NEDD4P46934 1319 aa15.62■□□□□ 0.09
CHD3-210ENST00000479080 SCN4AP35499 1836 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 ENTPD3O75355 529 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 POTEJP0CG39 1038 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 LMOD1P29536 600 aaPredicted RBP15.61■□□□□ 0.09
CHD3-210ENST00000479080 EPHX2P34913 555 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 FKBP1CQ5VVH2 108 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 DYNLL2Q96FJ2 89 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 TEPSINQ96N21 525 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 NACAP1Q9BZK3 213 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 VEZTQ9HBM0 779 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 GGA3Q9NZ52 723 aa15.61■□□□□ 0.09
CHD3-210ENST00000479080 ARPP21Q9UBL0 812 aaPredicted RBP15.61■□□□□ 0.09
CHD3-210ENST00000479080 E7EWF7 191 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
CHD3-210ENST00000479080 CPA1P15085 419 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 GABPAQ06546 454 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 ANGEL2Q5VTE6 544 aaKnown RBP15.6■□□□□ 0.09
CHD3-210ENST00000479080 DLK2Q6UY11 383 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 SLC44A5Q8NCS7 719 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 FAM151AQ8WW52 585 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 TMEM39BQ9GZU3 492 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 CTNNA3Q9UI47 895 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 SSC5DA1L4H1 1573 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 MYH1P12882 1939 aa15.6■□□□□ 0.09
CHD3-210ENST00000479080 MINDY4BA8MYZ0 360 aa15.59■□□□□ 0.09
CHD3-210ENST00000479080 ZNF213O14771 459 aa15.59■□□□□ 0.09
CHD3-210ENST00000479080 FGRP09769 529 aa15.59■□□□□ 0.09
CHD3-210ENST00000479080 ANAPC15P60006 121 aa15.59■□□□□ 0.09
CHD3-210ENST00000479080 IMMTQ16891 758 aaKnown RBP15.59■□□□□ 0.09
CHD3-210ENST00000479080 STK11IPQ8N1F8 1099 aa15.59■□□□□ 0.09
CHD3-210ENST00000479080 STAG1Q8WVM7 1258 aa15.59■□□□□ 0.09
CHD3-210ENST00000479080 NMRK2Q9NPI5 230 aa15.59■□□□□ 0.09
CHD3-210ENST00000479080 FAM196BA6NMK8 535 aa15.58■□□□□ 0.08
CHD3-210ENST00000479080 RASA3Q14644 834 aa15.58■□□□□ 0.08
CHD3-210ENST00000479080 USP50Q70EL3 339 aaPredicted RBP15.58■□□□□ 0.08
CHD3-210ENST00000479080 FAM83AQ86UY5 434 aa15.58■□□□□ 0.08
CHD3-210ENST00000479080 METTL16Q86W50 562 aaKnown RBP15.58■□□□□ 0.08
CHD3-210ENST00000479080 MB21D2Q8IYB1 491 aaPredicted RBP15.58■□□□□ 0.08
CHD3-210ENST00000479080 UPF2Q9HAU5 1272 aaKnown RBP15.58■□□□□ 0.08
CHD3-210ENST00000479080 TMOD2Q9NZR1 351 aa15.58■□□□□ 0.08
CHD3-210ENST00000479080 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
CHD3-210ENST00000479080 PRDM1O75626 825 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms