RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 PTPN21Q16825 1174 aa16.24■□□□□ 0.19
CCDC78-210ENST00000478979 SPECC1Q5M775 1068 aa16.24■□□□□ 0.19
CCDC78-210ENST00000478979 FBXO18Q8NFZ0 1043 aa16.24■□□□□ 0.19
CCDC78-210ENST00000478979 NUTM2BA6NNL0 878 aaPredicted RBP16.23■□□□□ 0.19
CCDC78-210ENST00000478979 NUTM2EB1AL46 878 aaPredicted RBP16.23■□□□□ 0.19
CCDC78-210ENST00000478979 PDE8AO60658 829 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 OAS2P29728 719 aaKnown RBP16.23■□□□□ 0.19
CCDC78-210ENST00000478979 NUTM2AQ8IVF1 878 aaPredicted RBP16.23■□□□□ 0.19
CCDC78-210ENST00000478979 CHMP4CQ96CF2 233 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 EFCC1Q9HA90 598 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 SMIM22K7EJ46 135 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 MYO1CO00159 1063 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 SPTLC2O15270 562 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 RASGRF1Q13972 1273 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 MYSM1Q5VVJ2 828 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 BICDL1Q6ZP65 573 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 HOMER1Q86YM7 354 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCDC78-210ENST00000478979 ABCF2Q9UG63 623 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 SHANK3Q9BYB0 1731 aa16.23■□□□□ 0.19
CCDC78-210ENST00000478979 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
CCDC78-210ENST00000478979 DHX16O60231 1041 aaKnown RBP16.22■□□□□ 0.19
CCDC78-210ENST00000478979 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 DPCR1Q3MIW9 517 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 ARMCX5Q6P1M9 558 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 LINC00301Q8NCQ3 95 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 NAPBQ9H115 298 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 DNAI1Q9UI46 699 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 ANGEL1Q9UNK9 670 aaKnown RBP16.22■□□□□ 0.19
CCDC78-210ENST00000478979 CTAGE5O15320 804 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 SASH3O75995 380 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 GPS2Q13227 327 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 HSP90AA4PQ58FG1 418 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 TMEM67Q5HYA8 995 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 VGLL2Q8N8G2 317 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 MNS1Q8NEH6 495 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 CLIC6Q96NY7 704 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 UBXN6Q9BZV1 441 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 TMX1Q9H3N1 280 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 ANO10Q9NW15 660 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 SPATA5Q8NB90 893 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 ENGASEQ8NFI3 743 aa16.22■□□□□ 0.19
CCDC78-210ENST00000478979 IFIT3O14879 490 aaKnown RBP16.21■□□□□ 0.19
CCDC78-210ENST00000478979 TMC6Q7Z403 805 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 CEP57L1Q8IYX8 460 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 PLA2G12BQ9BX93 195 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 SLC26A6Q9BXS9 759 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 IMPACTQ9P2X3 320 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 GOLGA8AA7E2F4 631 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 SFPQP23246 707 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC78-210ENST00000478979 TDO2P48775 406 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 PUM3Q15397 648 aaKnown RBP16.21■□□□□ 0.19
CCDC78-210ENST00000478979 NUP133Q8WUM0 1156 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 CCDC34Q96HJ3 373 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 EPC1Q9H2F5 836 aa16.21■□□□□ 0.19
CCDC78-210ENST00000478979 ABCC6O95255 1503 aa16.21■□□□□ 0.18
CCDC78-210ENST00000478979 TBC1D8O95759 1140 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-210ENST00000478979 SLC4A8Q2Y0W8 1093 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 VPS37DQ86XT2 251 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 FMR1NBQ8N0W7 255 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-210ENST00000478979 CCDC150Q8NCX0 1101 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 EPB41L4AQ9HCS5 686 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-210ENST00000478979 TADA3O75528 432 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 SMC2O95347 1197 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 NOP2P46087 812 aaKnown RBP16.2■□□□□ 0.18
CCDC78-210ENST00000478979 ETF1P62495 437 aaKnown RBP16.2■□□□□ 0.18
CCDC78-210ENST00000478979 KRT40Q6A162 431 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 APOA5Q6Q788 366 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 RTEL1Q9NZ71 1219 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 NIP7Q9Y221 180 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCDC78-210ENST00000478979 hCG_1642624A0A1W2PR95 340 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 MINDY4BA8MYZ0 360 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 ZBTB43O43298 467 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 WDHD1O75717 1129 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-210ENST00000478979 SMC1AQ14683 1233 aaKnown RBP16.2■□□□□ 0.18
CCDC78-210ENST00000478979 STRBPQ96SI9 672 aaKnown RBP16.2■□□□□ 0.18
CCDC78-210ENST00000478979 CARD6Q9BX69 1037 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 ZSWIM5Q9P217 1185 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 LRP2BPQ9P2M1 347 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 TACC3Q9Y6A5 838 aa16.2■□□□□ 0.18
CCDC78-210ENST00000478979 GYS2P54840 703 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 ANO1Q5XXA6 986 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 ADALQ6DHV7 355 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 SDR42E1Q8WUS8 393 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 XPO4Q9C0E2 1151 aaKnown RBP16.19■□□□□ 0.18
CCDC78-210ENST00000478979 KCNJ14Q9UNX9 436 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 MROH7-TTC4A0A0A0MT08 1334 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 URI1O94763 535 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-210ENST00000478979 ZNF202O95125 648 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 SLC5A1P13866 664 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 PFKFB1P16118 471 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 TTF1Q15361 905 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-210ENST00000478979 IFNL3Q8IZI9 196 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 LPIN2Q92539 896 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 SLC4A4Q9Y6R1 1079 aa16.19■□□□□ 0.18
CCDC78-210ENST00000478979 AKAP11Q9UKA4 1901 aa16.18■□□□□ 0.18
CCDC78-210ENST00000478979 SH2B2O14492 632 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms