RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 UBE2Q2LH0YL09 131 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 CHGBP05060 677 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 PDE1AP54750 535 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 FKBP1CQ5VVH2 108 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 ARMC9Q7Z3E5 817 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 ZFPM1Q8IX07 1006 aa8.35□□□□□ -1.07
BRCA1-215ENST00000478531 SIPA1L1O43166 1804 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 PPP1R12BO60237 982 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-215ENST00000478531 PLCG2P16885 1265 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 VEGFBP49765 207 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 ZNF157P51786 506 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-215ENST00000478531 FKBP1BP68106 108 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 SLC4A8Q2Y0W8 1093 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 DDX60LQ5H9U9 1706 aaKnown RBP8.34□□□□□ -1.07
BRCA1-215ENST00000478531 SAMD1Q6SPF0 538 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-215ENST00000478531 MIGA2Q7L4E1 593 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 MAPKAPK5Q8IW41 473 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 DNAJC5GQ8N7S2 189 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 TGFBRAP1Q8WUH2 860 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 FAM151AQ8WW52 585 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 CAPNS2Q96L46 248 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 CSRNP1Q96S65 589 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 FSD1Q9BTV5 496 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 IDI2Q9BXS1 227 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 ATAD5Q96QE3 1844 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 MYH8P13535 1937 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 THSD7BQ9C0I4 1608 aa8.34□□□□□ -1.07
BRCA1-215ENST00000478531 MAGEB6P1A0A0J9YX57 407 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 TCRBV5S4A2TA0A5A2 114 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 ADD2P35612 726 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 IREB2P48200 963 aaKnown RBP8.33□□□□□ -1.08
BRCA1-215ENST00000478531 KBTBD3Q8NAB2 608 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 FLT1P17948 1338 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 WDR33Q9C0J8 1336 aaKnown RBP8.33□□□□□ -1.08
BRCA1-215ENST00000478531 DDTLA6NHG4 134 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-215ENST00000478531 TRIM6-TRIM34B2RNG4 842 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 IGSF3O75054 1194 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 AOC2O75106 756 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 ENTPD3O75355 529 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 ATXN8OSP0DMR3 200 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 USP5P45974 858 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 MKRN3Q13064 507 aaKnown RBP8.33□□□□□ -1.08
BRCA1-215ENST00000478531 ZSCAN25Q6NSZ9 544 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 LCORLQ8N3X6 602 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 HOOK2Q96ED9 719 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 CLMNQ96JQ2 1002 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 OSBPL5Q9H0X9 879 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-215ENST00000478531 STAP2Q9UGK3 403 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 SAP30BPQ9UHR5 308 aaKnown RBP8.33□□□□□ -1.08
BRCA1-215ENST00000478531 DOCK1Q14185 1865 aa8.33□□□□□ -1.08
BRCA1-215ENST00000478531 MBD4O95243 580 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 ECE1P42892 770 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 PPP4CP60510 307 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 DCAF15Q66K64 600 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 TMED8Q6PL24 325 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-215ENST00000478531 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 PLEKHM2Q8IWE5 1019 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 AIDAQ96BJ3 306 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 HHIPL1Q96JK4 782 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 CCDC136Q96JN2 1154 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 WRNIP1Q96S55 665 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 RIOK1Q9BRS2 568 aaKnown RBP8.32□□□□□ -1.08
BRCA1-215ENST00000478531 ARMT1Q9H993 441 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 LAMB1P07942 1786 aa8.32□□□□□ -1.08
BRCA1-215ENST00000478531 FAM196BA6NMK8 535 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 USP2O75604 605 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-215ENST00000478531 SLURP2P0DP57 97 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 PDE4AP27815 886 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 UBE3CQ15386 1083 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 RASAL3Q86YV0 1011 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 CERS3Q8IU89 383 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 SDR42E1Q8WUS8 393 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 RILPL2Q969X0 211 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 CRNKL1Q9BZJ0 848 aaKnown RBP8.31□□□□□ -1.08
BRCA1-215ENST00000478531 PUS7LQ9H0K6 701 aaKnown RBP8.31□□□□□ -1.08
BRCA1-215ENST00000478531 TAOK2Q9UL54 1235 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 COL2A1P02458 1487 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-215ENST00000478531 ATRNL1Q5VV63 1379 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 RNF113AO15541 343 aaKnown RBP8.31□□□□□ -1.08
BRCA1-215ENST00000478531 SLC10A3P09131 477 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 VGLL4Q14135 290 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 MAP3K11Q16584 847 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
BRCA1-215ENST00000478531 CENPQQ7L2Z9 268 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-215ENST00000478531 ANKRD13AQ8IZ07 590 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 ZKSCAN4Q969J2 545 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-215ENST00000478531 EVI5LQ96CN4 794 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 ZNF341Q9BYN7 854 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 ELP3Q9H9T3 547 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 CSADQ9Y600 493 aa8.31□□□□□ -1.08
BRCA1-215ENST00000478531 FAM155AB1AL88 458 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-215ENST00000478531 ZFYP08048 801 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-215ENST00000478531 C1QBPQ07021 282 aaKnown RBP8.3□□□□□ -1.08
BRCA1-215ENST00000478531 LDLRAD1Q5T700 205 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 SKAP1Q86WV1 359 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.3□□□□□ -1.08
BRCA1-215ENST00000478531 OSBP2Q969R2 916 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 CCDC102AQ96A19 550 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms